EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000009766 (Gene tree)
Gene ID: 105019249
Gene Symbol: snrnp48
Alias: fd10a06|wu:fd10a06
Full Name: small nuclear ribonucleoprotein U11/U12 subunit 48
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 4937 bases
Position: chrLG20:13904498-13909434
Accession: 105019249
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000009187	zf-U11-48K	PF05253.12	4.6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000004270	-	2432	XM_010885280	ENSELUP00000009187	357 (aa)	XP_010883582	UPI0006618C3D

Gene Model

Click here to download ENSELUG00000009766's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000009766's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000009766	snrnp48	77	47.857	ENSG00000168566	SNRNP48	87	46.689	Homo_sapiens
ENSELUG00000009766	snrnp48	79	64.912	ENSAPOG00000021430	snrnp48	85	65.172	Acanthochromis_polyacanthus
ENSELUG00000009766	snrnp48	83	47.213	ENSAMEG00000017349	SNRNP48	88	46.926	Ailuropoda_melanoleuca
ENSELUG00000009766	snrnp48	80	58.885	ENSACIG00000002032	snrnp48	88	57.143	Amphilophus_citrinellus
ENSELUG00000009766	snrnp48	79	63.860	ENSAOCG00000010562	snrnp48	85	64.360	Amphiprion_ocellaris
ENSELUG00000009766	snrnp48	79	61.837	ENSAPEG00000003231	snrnp48	85	62.153	Amphiprion_percula
ENSELUG00000009766	snrnp48	77	64.286	ENSATEG00000020210	snrnp48	84	63.732	Anabas_testudineus
ENSELUG00000009766	snrnp48	85	47.419	ENSACAG00000002811	SNRNP48	80	49.618	Anolis_carolinensis
ENSELUG00000009766	snrnp48	77	48.214	ENSANAG00000033538	SNRNP48	87	47.020	Aotus_nancymaae
ENSELUG00000009766	snrnp48	94	57.612	ENSAMXG00000015309	snrnp48	91	60.261	Astyanax_mexicanus
ENSELUG00000009766	snrnp48	92	44.379	ENSBTAG00000001123	SNRNP48	88	49.026	Bos_taurus
ENSELUG00000009766	snrnp48	78	47.183	ENSCJAG00000021330	SNRNP48	88	46.732	Callithrix_jacchus
ENSELUG00000009766	snrnp48	94	43.440	ENSCAFG00000009574	SNRNP48	73	46.535	Canis_familiaris
ENSELUG00000009766	snrnp48	94	43.567	ENSCAFG00020013203	SNRNP48	87	46.535	Canis_lupus_dingo
ENSELUG00000009766	snrnp48	92	44.083	ENSCHIG00000015216	SNRNP48	88	48.701	Capra_hircus
ENSELUG00000009766	snrnp48	77	47.500	ENSTSYG00000000698	SNRNP48	86	46.465	Carlito_syrichta
ENSELUG00000009766	snrnp48	81	45.574	ENSCAPG00000006768	SNRNP48	93	46.259	Cavia_aperea
ENSELUG00000009766	snrnp48	92	45.349	ENSCPOG00000007910	SNRNP48	90	47.619	Cavia_porcellus
ENSELUG00000009766	snrnp48	76	48.364	ENSCCAG00000035652	SNRNP48	86	47.138	Cebus_capucinus
ENSELUG00000009766	snrnp48	83	46.179	ENSCATG00000033947	SNRNP48	87	46.358	Cercocebus_atys
ENSELUG00000009766	snrnp48	78	47.350	ENSCLAG00000003765	SNRNP48	88	47.213	Chinchilla_lanigera
ENSELUG00000009766	snrnp48	77	48.214	ENSCSAG00000007409	SNRNP48	87	47.020	Chlorocebus_sabaeus
ENSELUG00000009766	snrnp48	84	47.727	ENSCPBG00000019146	SNRNP48	85	50.916	Chrysemys_picta_bellii
ENSELUG00000009766	snrnp48	77	48.214	ENSCANG00000030017	SNRNP48	87	47.020	Colobus_angolensis_palliatus
ENSELUG00000009766	snrnp48	78	39.865	ENSCGRG00001008805	-	92	38.538	Cricetulus_griseus_chok1gshd
ENSELUG00000009766	snrnp48	78	48.421	ENSCGRG00001001076	-	88	47.231	Cricetulus_griseus_chok1gshd
ENSELUG00000009766	snrnp48	78	48.421	ENSCGRG00000007781	Snrnp48	88	47.231	Cricetulus_griseus_crigri
ENSELUG00000009766	snrnp48	96	52.299	ENSCSEG00000000722	snrnp48	92	51.445	Cynoglossus_semilaevis
ENSELUG00000009766	snrnp48	98	52.030	ENSCVAG00000019829	snrnp48	82	58.879	Cyprinodon_variegatus
ENSELUG00000009766	snrnp48	94	53.254	ENSDARG00000039989	snrnp48	92	55.380	Danio_rerio
ENSELUG00000009766	snrnp48	77	47.518	ENSDNOG00000014978	SNRNP48	87	46.382	Dasypus_novemcinctus
ENSELUG00000009766	snrnp48	98	42.458	ENSDORG00000015140	Snrnp48	85	46.000	Dipodomys_ordii
ENSELUG00000009766	snrnp48	77	48.043	ENSEASG00005012021	SNRNP48	87	47.195	Equus_asinus_asinus
ENSELUG00000009766	snrnp48	77	48.399	ENSECAG00000026937	SNRNP48	87	47.525	Equus_caballus
ENSELUG00000009766	snrnp48	80	33.447	ENSEEUG00000015437	SNRNP48	90	33.333	Erinaceus_europaeus
ENSELUG00000009766	snrnp48	77	48.043	ENSFCAG00000018853	SNRNP48	87	46.865	Felis_catus
ENSELUG00000009766	snrnp48	82	51.171	ENSFALG00000007797	SNRNP48	91	50.667	Ficedula_albicollis
ENSELUG00000009766	snrnp48	80	47.603	ENSFDAG00000009231	SNRNP48	91	46.519	Fukomys_damarensis
ENSELUG00000009766	snrnp48	57	67.488	ENSFHEG00000014647	snrnp48	87	60.305	Fundulus_heteroclitus
ENSELUG00000009766	snrnp48	69	64.898	ENSGMOG00000018599	-	77	64.940	Gadus_morhua
ENSELUG00000009766	snrnp48	71	53.053	ENSGALG00000013005	SNRNP48	88	53.053	Gallus_gallus
ENSELUG00000009766	snrnp48	73	63.602	ENSGAFG00000021639	snrnp48	94	58.702	Gambusia_affinis
ENSELUG00000009766	snrnp48	69	63.454	ENSGACG00000017756	-	86	59.247	Gasterosteus_aculeatus
ENSELUG00000009766	snrnp48	83	47.712	ENSGAGG00000000865	SNRNP48	87	51.111	Gopherus_agassizii
ENSELUG00000009766	snrnp48	77	48.214	ENSGGOG00000013220	SNRNP48	87	47.020	Gorilla_gorilla
ENSELUG00000009766	snrnp48	76	62.909	ENSHBUG00000017066	snrnp48	83	62.543	Haplochromis_burtoni
ENSELUG00000009766	snrnp48	80	46.918	ENSHGLG00000015241	SNRNP48	90	46.178	Heterocephalus_glaber_female
ENSELUG00000009766	snrnp48	80	46.918	ENSHGLG00100010027	SNRNP48	90	46.178	Heterocephalus_glaber_male
ENSELUG00000009766	snrnp48	78	48.239	ENSSTOG00000014635	SNRNP48	88	47.386	Ictidomys_tridecemlineatus
ENSELUG00000009766	snrnp48	78	47.518	ENSJJAG00000011495	Snrnp48	87	46.711	Jaculus_jaculus
ENSELUG00000009766	snrnp48	95	58.430	ENSKMAG00000016514	snrnp48	88	60.703	Kryptolebias_marmoratus
ENSELUG00000009766	snrnp48	72	65.504	ENSLBEG00000026249	snrnp48	93	57.988	Labrus_bergylta
ENSELUG00000009766	snrnp48	93	49.138	ENSLACG00000003958	SNRNP48	90	51.290	Latimeria_chalumnae
ENSELUG00000009766	snrnp48	93	56.119	ENSLOCG00000004187	snrnp48	91	58.900	Lepisosteus_oculatus
ENSELUG00000009766	snrnp48	77	48.754	ENSLAFG00000011152	SNRNP48	87	47.525	Loxodonta_africana
ENSELUG00000009766	snrnp48	77	48.214	ENSMFAG00000045216	SNRNP48	87	47.020	Macaca_fascicularis
ENSELUG00000009766	snrnp48	77	48.214	ENSMMUG00000014785	SNRNP48	87	47.020	Macaca_mulatta
ENSELUG00000009766	snrnp48	77	48.214	ENSMNEG00000042269	SNRNP48	87	47.020	Macaca_nemestrina
ENSELUG00000009766	snrnp48	77	48.214	ENSMLEG00000034004	SNRNP48	87	47.020	Mandrillus_leucophaeus
ENSELUG00000009766	snrnp48	95	55.132	ENSMAMG00000018673	snrnp48	74	62.369	Mastacembelus_armatus
ENSELUG00000009766	snrnp48	82	50.329	ENSMGAG00000006037	SNRNP48	89	53.585	Meleagris_gallopavo
ENSELUG00000009766	snrnp48	78	46.643	ENSMAUG00000011944	Snrnp48	88	45.574	Mesocricetus_auratus
ENSELUG00000009766	snrnp48	78	48.592	ENSMICG00000012497	SNRNP48	88	47.386	Microcebus_murinus
ENSELUG00000009766	snrnp48	78	47.887	ENSMOCG00000015555	Snrnp48	88	46.732	Microtus_ochrogaster
ENSELUG00000009766	snrnp48	53	66.842	ENSMMOG00000003072	-	60	66.842	Mola_mola
ENSELUG00000009766	snrnp48	76	51.246	ENSMODG00000009996	SNRNP48	80	50.000	Monodelphis_domestica
ENSELUG00000009766	snrnp48	78	63.669	ENSMALG00000005725	snrnp48	93	60.534	Monopterus_albus
ENSELUG00000009766	snrnp48	78	48.239	MGP_CAROLIEiJ_G0018441	Snrnp48	88	47.386	Mus_caroli
ENSELUG00000009766	snrnp48	78	48.239	ENSMUSG00000021431	Snrnp48	88	47.386	Mus_musculus
ENSELUG00000009766	snrnp48	78	48.410	MGP_PahariEiJ_G0019509	Snrnp48	88	47.541	Mus_pahari
ENSELUG00000009766	snrnp48	78	48.592	MGP_SPRETEiJ_G0019321	Snrnp48	88	47.712	Mus_spretus
ENSELUG00000009766	snrnp48	94	43.314	ENSNGAG00000004849	Snrnp48	87	47.351	Nannospalax_galili
ENSELUG00000009766	snrnp48	76	63.273	ENSNBRG00000012127	snrnp48	88	60.897	Neolamprologus_brichardi
ENSELUG00000009766	snrnp48	77	48.214	ENSNLEG00000011667	SNRNP48	87	47.020	Nomascus_leucogenys
ENSELUG00000009766	snrnp48	78	47.518	ENSOPRG00000015471	SNRNP48	93	45.902	Ochotona_princeps
ENSELUG00000009766	snrnp48	76	63.273	ENSONIG00000001520	snrnp48	87	60.772	Oreochromis_niloticus
ENSELUG00000009766	snrnp48	52	36.098	ENSOANG00000019888	-	98	36.585	Ornithorhynchus_anatinus
ENSELUG00000009766	snrnp48	75	48.897	ENSOCUG00000005168	SNRNP48	100	47.284	Oryctolagus_cuniculus
ENSELUG00000009766	snrnp48	85	61.111	ENSORLG00000015654	snrnp48	87	61.039	Oryzias_latipes
ENSELUG00000009766	snrnp48	85	61.438	ENSORLG00020015976	snrnp48	74	61.364	Oryzias_latipes_hni
ENSELUG00000009766	snrnp48	85	61.765	ENSORLG00015022379	snrnp48	75	61.688	Oryzias_latipes_hsok
ENSELUG00000009766	snrnp48	80	62.718	ENSOMEG00000022007	snrnp48	93	58.631	Oryzias_melastigma
ENSELUG00000009766	snrnp48	80	47.603	ENSOGAG00000005275	SNRNP48	93	46.519	Otolemur_garnettii
ENSELUG00000009766	snrnp48	65	52.766	ENSOARG00000017319	SNRNP48	87	50.965	Ovis_aries
ENSELUG00000009766	snrnp48	77	48.214	ENSPPAG00000032873	SNRNP48	87	47.020	Pan_paniscus
ENSELUG00000009766	snrnp48	75	48.364	ENSPPRG00000004283	SNRNP48	85	47.138	Panthera_pardus
ENSELUG00000009766	snrnp48	65	50.638	ENSPTIG00000013502	SNRNP48	87	49.027	Panthera_tigris_altaica
ENSELUG00000009766	snrnp48	77	48.214	ENSPTRG00000017703	SNRNP48	87	47.020	Pan_troglodytes
ENSELUG00000009766	snrnp48	77	48.214	ENSPANG00000000771	SNRNP48	87	47.020	Papio_anubis
ENSELUG00000009766	snrnp48	90	57.187	ENSPKIG00000013703	snrnp48	62	59.932	Paramormyrops_kingsleyae
ENSELUG00000009766	snrnp48	79	47.297	ENSPSIG00000002213	SNRNP48	85	50.000	Pelodiscus_sinensis
ENSELUG00000009766	snrnp48	75	56.877	ENSPMGG00000008120	snrnp48	95	56.877	Periophthalmus_magnuspinnatus
ENSELUG00000009766	snrnp48	78	48.057	ENSPEMG00000008872	Snrnp48	88	46.885	Peromyscus_maniculatus_bairdii
ENSELUG00000009766	snrnp48	73	64.751	ENSPFOG00000003578	snrnp48	94	60.177	Poecilia_formosa
ENSELUG00000009766	snrnp48	67	64.286	ENSPLAG00000002290	snrnp48	82	64.286	Poecilia_latipinna
ENSELUG00000009766	snrnp48	73	64.751	ENSPMEG00000018033	snrnp48	94	60.177	Poecilia_mexicana
ENSELUG00000009766	snrnp48	71	64.706	ENSPREG00000018541	snrnp48	94	59.118	Poecilia_reticulata
ENSELUG00000009766	snrnp48	77	47.500	ENSPPYG00000016209	SNRNP48	87	46.358	Pongo_abelii
ENSELUG00000009766	snrnp48	67	37.959	ENSPCAG00000011991	SNRNP48	94	40.000	Procavia_capensis
ENSELUG00000009766	snrnp48	80	48.797	ENSPVAG00000002854	SNRNP48	90	47.604	Pteropus_vampyrus
ENSELUG00000009766	snrnp48	76	62.545	ENSPNYG00000015399	snrnp48	96	60.256	Pundamilia_nyererei
ENSELUG00000009766	snrnp48	78	48.410	ENSRNOG00000013756	Snrnp48	88	47.541	Rattus_norvegicus
ENSELUG00000009766	snrnp48	77	48.214	ENSRBIG00000043856	SNRNP48	94	47.020	Rhinopithecus_bieti
ENSELUG00000009766	snrnp48	77	48.214	ENSRROG00000043229	SNRNP48	87	47.020	Rhinopithecus_roxellana
ENSELUG00000009766	snrnp48	77	48.571	ENSSBOG00000019486	SNRNP48	87	47.351	Saimiri_boliviensis_boliviensis
ENSELUG00000009766	snrnp48	76	49.470	ENSSHAG00000014483	SNRNP48	86	48.333	Sarcophilus_harrisii
ENSELUG00000009766	snrnp48	72	62.500	ENSSFOG00015006610	snrnp48	76	59.327	Scleropages_formosus
ENSELUG00000009766	snrnp48	80	62.021	ENSSDUG00000014953	snrnp48	93	58.754	Seriola_dumerili
ENSELUG00000009766	snrnp48	80	63.889	ENSSLDG00000005989	snrnp48	93	59.050	Seriola_lalandi_dorsalis
ENSELUG00000009766	snrnp48	85	43.987	ENSSPUG00000006257	SNRNP48	77	48.339	Sphenodon_punctatus
ENSELUG00000009766	snrnp48	79	63.860	ENSSPAG00000006454	snrnp48	85	64.138	Stegastes_partitus
ENSELUG00000009766	snrnp48	82	49.333	ENSTGUG00000007575	SNRNP48	86	52.963	Taeniopygia_guttata
ENSELUG00000009766	snrnp48	72	58.594	ENSTRUG00000007031	snrnp48	85	56.794	Takifugu_rubripes
ENSELUG00000009766	snrnp48	97	50.857	ENSTNIG00000012977	-	96	51.360	Tetraodon_nigroviridis
ENSELUG00000009766	snrnp48	73	48.120	ENSTBEG00000015620	SNRNP48	75	48.638	Tupaia_belangeri
ENSELUG00000009766	snrnp48	75	48.352	ENSTTRG00000016715	SNRNP48	87	47.869	Tursiops_truncatus
ENSELUG00000009766	snrnp48	94	43.275	ENSUAMG00000003690	SNRNP48	95	43.620	Ursus_americanus
ENSELUG00000009766	snrnp48	65	51.489	ENSVPAG00000003557	SNRNP48	87	49.416	Vicugna_pacos
ENSELUG00000009766	snrnp48	94	43.275	ENSVVUG00000004996	SNRNP48	87	46.205	Vulpes_vulpes
ENSELUG00000009766	snrnp48	82	47.959	ENSXETG00000020447	snrnp48	89	47.841	Xenopus_tropicalis
ENSELUG00000009766	snrnp48	73	63.985	ENSXMAG00000013595	snrnp48	94	58.017	Xiphophorus_maculatus