EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000009905 (Gene tree)
Gene ID: 105030201
Gene Symbol: prdm12b
Alias: -
Full Name: PR domain zinc finger protein 12
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 4334 bases
Position: chrLG13:415148-419481
Accession: 105030201
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000032112	zf-C2H2	PF00096.26	5.2e-11	1	2
ENSELUP00000032112	zf-C2H2	PF00096.26	5.2e-11	2	2
ENSELUP00000032112	zf-met	PF12874.7	7.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000004051	-	2463	XM_010903911	ENSELUP00000032112	369 (aa)	XP_010902213	UPI0005777CF3

Gene Model

Click here to download ENSELUG00000009905's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000009905's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000009905	prdm12b	100	79.839	ENSELUG00000013674	PRDM12	100	80.789
ENSELUG00000009905	prdm12b	66	42.105	ENSELUG00000005894	prdm5	84	42.105

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000009905	prdm12b	91	86.607	ENSG00000130711	PRDM12	99	80.526	Homo_sapiens
ENSELUG00000009905	prdm12b	100	66.400	ENSAPOG00000018234	-	100	66.667	Acanthochromis_polyacanthus
ENSELUG00000009905	prdm12b	100	81.250	ENSAPOG00000016051	prdm12b	100	81.510	Acanthochromis_polyacanthus
ENSELUG00000009905	prdm12b	89	84.337	ENSAMEG00000016234	PRDM12	99	84.337	Ailuropoda_melanoleuca
ENSELUG00000009905	prdm12b	100	80.155	ENSACIG00000005193	-	100	80.670	Amphilophus_citrinellus
ENSELUG00000009905	prdm12b	100	80.526	ENSACIG00000019578	prdm12b	100	81.579	Amphilophus_citrinellus
ENSELUG00000009905	prdm12b	100	82.368	ENSAOCG00000015040	prdm12b	100	82.632	Amphiprion_ocellaris
ENSELUG00000009905	prdm12b	100	83.024	ENSAPEG00000015092	prdm12b	100	83.289	Amphiprion_percula
ENSELUG00000009905	prdm12b	100	73.522	ENSAPEG00000022849	-	99	75.835	Amphiprion_percula
ENSELUG00000009905	prdm12b	100	80.208	ENSATEG00000014595	-	100	81.510	Anabas_testudineus
ENSELUG00000009905	prdm12b	95	84.330	ENSANAG00000020616	PRDM12	99	84.330	Aotus_nancymaae
ENSELUG00000009905	prdm12b	100	80.965	ENSACLG00000011876	prdm12b	100	80.965	Astatotilapia_calliptera
ENSELUG00000009905	prdm12b	100	77.863	ENSACLG00000007631	-	100	80.153	Astatotilapia_calliptera
ENSELUG00000009905	prdm12b	100	86.290	ENSAMXG00000033665	prdm12b	100	86.828	Astyanax_mexicanus
ENSELUG00000009905	prdm12b	100	81.769	ENSAMXG00000008540	PRDM12	100	81.769	Astyanax_mexicanus
ENSELUG00000009905	prdm12b	91	85.714	ENSBTAG00000023797	PRDM12	99	81.016	Bos_taurus
ENSELUG00000009905	prdm12b	91	86.310	ENSCJAG00000020540	PRDM12	99	81.769	Callithrix_jacchus
ENSELUG00000009905	prdm12b	79	85.374	ENSCAFG00000023076	PRDM12	99	79.403	Canis_familiaris
ENSELUG00000009905	prdm12b	91	85.417	ENSCAFG00020024046	PRDM12	99	80.106	Canis_lupus_dingo
ENSELUG00000009905	prdm12b	91	85.417	ENSCHIG00000025005	PRDM12	99	80.267	Capra_hircus
ENSELUG00000009905	prdm12b	86	85.625	ENSCPOG00000005901	PRDM12	95	85.625	Cavia_porcellus
ENSELUG00000009905	prdm12b	91	86.310	ENSCCAG00000037485	PRDM12	99	81.117	Cebus_capucinus
ENSELUG00000009905	prdm12b	91	86.310	ENSCATG00000020327	PRDM12	99	81.117	Cercocebus_atys
ENSELUG00000009905	prdm12b	91	85.714	ENSCLAG00000005499	PRDM12	90	85.714	Chinchilla_lanigera
ENSELUG00000009905	prdm12b	91	86.310	ENSCSAG00000014756	PRDM12	99	80.902	Chlorocebus_sabaeus
ENSELUG00000009905	prdm12b	100	83.288	ENSCPBG00000022628	PRDM12	99	83.288	Chrysemys_picta_bellii
ENSELUG00000009905	prdm12b	91	86.012	ENSCGRG00001015005	Prdm12	99	79.947	Cricetulus_griseus_chok1gshd
ENSELUG00000009905	prdm12b	100	80.429	ENSCVAG00000017166	prdm12b	100	81.501	Cyprinodon_variegatus
ENSELUG00000009905	prdm12b	100	76.864	ENSCVAG00000000944	-	100	78.718	Cyprinodon_variegatus
ENSELUG00000009905	prdm12b	100	90.296	ENSDARG00000007430	prdm12b	100	90.296	Danio_rerio
ENSELUG00000009905	prdm12b	90	85.163	ENSDNOG00000042302	PRDM12	99	80.533	Dasypus_novemcinctus
ENSELUG00000009905	prdm12b	90	64.672	ENSEBUG00000016780	prdm12b	78	66.097	Eptatretus_burgeri
ENSELUG00000009905	prdm12b	95	83.191	ENSEASG00005008472	PRDM12	99	79.733	Equus_asinus_asinus
ENSELUG00000009905	prdm12b	95	83.476	ENSECAG00000005933	PRDM12	99	80.000	Equus_caballus
ENSELUG00000009905	prdm12b	91	85.417	ENSFCAG00000043086	PRDM12	99	80.319	Felis_catus
ENSELUG00000009905	prdm12b	100	83.784	ENSFALG00000001445	PRDM12	89	83.784	Ficedula_albicollis
ENSELUG00000009905	prdm12b	100	81.117	ENSFHEG00000003944	prdm12b	100	81.698	Fundulus_heteroclitus
ENSELUG00000009905	prdm12b	100	77.411	ENSFHEG00000007746	-	100	77.919	Fundulus_heteroclitus
ENSELUG00000009905	prdm12b	100	82.133	ENSGMOG00000011797	prdm12b	100	82.133	Gadus_morhua
ENSELUG00000009905	prdm12b	100	83.784	ENSGALG00000003895	PRDM12	99	83.784	Gallus_gallus
ENSELUG00000009905	prdm12b	100	81.432	ENSGAFG00000010827	prdm12b	99	81.698	Gambusia_affinis
ENSELUG00000009905	prdm12b	100	82.306	ENSGACG00000016713	prdm12b	99	82.306	Gasterosteus_aculeatus
ENSELUG00000009905	prdm12b	100	83.288	ENSGAGG00000014083	PRDM12	99	83.288	Gopherus_agassizii
ENSELUG00000009905	prdm12b	91	86.310	ENSGGOG00000010568	PRDM12	99	80.211	Gorilla_gorilla
ENSELUG00000009905	prdm12b	100	81.746	ENSHBUG00000022878	prdm12b	100	82.804	Haplochromis_burtoni
ENSELUG00000009905	prdm12b	100	77.863	ENSHBUG00000022537	-	93	80.153	Haplochromis_burtoni
ENSELUG00000009905	prdm12b	91	85.119	ENSHGLG00000013939	PRDM12	99	78.933	Heterocephalus_glaber_female
ENSELUG00000009905	prdm12b	89	82.749	ENSHCOG00000003663	prdm12b	100	77.041	Hippocampus_comes
ENSELUG00000009905	prdm12b	100	72.632	ENSHCOG00000021167	-	100	72.632	Hippocampus_comes
ENSELUG00000009905	prdm12b	100	79.459	ENSIPUG00000019544	PRDM12	100	79.459	Ictalurus_punctatus
ENSELUG00000009905	prdm12b	100	87.601	ENSIPUG00000017053	prdm12b	100	87.601	Ictalurus_punctatus
ENSELUG00000009905	prdm12b	97	82.451	ENSSTOG00000005986	PRDM12	90	82.451	Ictidomys_tridecemlineatus
ENSELUG00000009905	prdm12b	91	85.714	ENSJJAG00000005424	Prdm12	99	85.714	Jaculus_jaculus
ENSELUG00000009905	prdm12b	99	77.005	ENSKMAG00000021205	-	93	79.718	Kryptolebias_marmoratus
ENSELUG00000009905	prdm12b	100	75.990	ENSKMAG00000016921	prdm12b	100	76.485	Kryptolebias_marmoratus
ENSELUG00000009905	prdm12b	100	81.963	ENSLBEG00000017769	prdm12b	100	81.963	Labrus_bergylta
ENSELUG00000009905	prdm12b	100	81.053	ENSLBEG00000007776	-	100	82.105	Labrus_bergylta
ENSELUG00000009905	prdm12b	100	83.288	ENSLACG00000017560	PRDM12	99	83.288	Latimeria_chalumnae
ENSELUG00000009905	prdm12b	100	89.218	ENSLOCG00000005429	prdm12b	99	89.757	Lepisosteus_oculatus
ENSELUG00000009905	prdm12b	91	83.284	ENSLAFG00000006979	PRDM12	99	77.573	Loxodonta_africana
ENSELUG00000009905	prdm12b	100	79.211	ENSMFAG00000040322	PRDM12	99	79.843	Macaca_fascicularis
ENSELUG00000009905	prdm12b	91	86.310	ENSMNEG00000037234	PRDM12	99	81.117	Macaca_nemestrina
ENSELUG00000009905	prdm12b	100	75.253	ENSMAMG00000018988	-	100	78.283	Mastacembelus_armatus
ENSELUG00000009905	prdm12b	100	83.024	ENSMAMG00000013212	prdm12b	100	83.024	Mastacembelus_armatus
ENSELUG00000009905	prdm12b	100	77.468	ENSMZEG00005000415	PRDM12	100	79.747	Maylandia_zebra
ENSELUG00000009905	prdm12b	98	83.516	ENSMGAG00000005438	PRDM12	98	83.516	Meleagris_gallopavo
ENSELUG00000009905	prdm12b	100	80.159	ENSMAUG00000013040	Prdm12	99	80.159	Mesocricetus_auratus
ENSELUG00000009905	prdm12b	95	83.476	ENSMICG00000015480	PRDM12	99	80.000	Microcebus_murinus
ENSELUG00000009905	prdm12b	99	81.793	ENSMOCG00000021026	Prdm12	92	84.330	Microtus_ochrogaster
ENSELUG00000009905	prdm12b	100	83.065	ENSMODG00000012108	PRDM12	99	83.065	Monodelphis_domestica
ENSELUG00000009905	prdm12b	100	70.699	ENSMALG00000021901	prdm12b	99	70.699	Monopterus_albus
ENSELUG00000009905	prdm12b	91	86.310	MGP_CAROLIEiJ_G0023414	Prdm12	99	80.423	Mus_caroli
ENSELUG00000009905	prdm12b	91	86.310	ENSMUSG00000079466	Prdm12	99	80.423	Mus_musculus
ENSELUG00000009905	prdm12b	91	86.310	MGP_PahariEiJ_G0024871	Prdm12	99	80.423	Mus_pahari
ENSELUG00000009905	prdm12b	91	86.310	MGP_SPRETEiJ_G0024331	Prdm12	99	80.423	Mus_spretus
ENSELUG00000009905	prdm12b	90	85.928	ENSNGAG00000018480	Prdm12	99	80.054	Nannospalax_galili
ENSELUG00000009905	prdm12b	100	73.421	ENSNBRG00000024312	-	100	74.211	Neolamprologus_brichardi
ENSELUG00000009905	prdm12b	100	80.315	ENSNBRG00000006727	prdm12b	100	82.152	Neolamprologus_brichardi
ENSELUG00000009905	prdm12b	100	74.462	ENSMEUG00000003828	PRDM12	99	74.462	Notamacropus_eugenii
ENSELUG00000009905	prdm12b	91	84.524	ENSOPRG00000008680	PRDM12	99	84.524	Ochotona_princeps
ENSELUG00000009905	prdm12b	95	83.476	ENSODEG00000016282	PRDM12	63	83.476	Octodon_degus
ENSELUG00000009905	prdm12b	64	80.851	ENSOANG00000001043	PRDM12	100	80.851	Ornithorhynchus_anatinus
ENSELUG00000009905	prdm12b	85	83.013	ENSOCUG00000008241	PRDM12	98	83.013	Oryctolagus_cuniculus
ENSELUG00000009905	prdm12b	100	78.406	ENSORLG00000017558	-	100	80.463	Oryzias_latipes
ENSELUG00000009905	prdm12b	100	81.316	ENSORLG00000007114	prdm12b	99	81.316	Oryzias_latipes
ENSELUG00000009905	prdm12b	100	78.205	ENSORLG00020013167	-	100	80.256	Oryzias_latipes_hni
ENSELUG00000009905	prdm12b	100	80.263	ENSORLG00020019565	prdm12b	99	80.263	Oryzias_latipes_hni
ENSELUG00000009905	prdm12b	100	80.526	ENSORLG00015007621	prdm12b	99	81.053	Oryzias_latipes_hsok
ENSELUG00000009905	prdm12b	100	78.406	ENSORLG00015003435	-	100	80.463	Oryzias_latipes_hsok
ENSELUG00000009905	prdm12b	100	78.442	ENSOMEG00000007762	-	100	78.987	Oryzias_melastigma
ENSELUG00000009905	prdm12b	100	80.940	ENSOMEG00000004134	prdm12b	99	81.201	Oryzias_melastigma
ENSELUG00000009905	prdm12b	91	85.417	ENSOGAG00000007557	PRDM12	98	85.417	Otolemur_garnettii
ENSELUG00000009905	prdm12b	81	83.667	ENSPPAG00000031506	-	99	83.667	Pan_paniscus
ENSELUG00000009905	prdm12b	100	73.656	ENSPPRG00000023024	PRDM12	92	73.656	Panthera_pardus
ENSELUG00000009905	prdm12b	91	86.607	ENSPTRG00000043324	-	99	80.475	Pan_troglodytes
ENSELUG00000009905	prdm12b	91	86.607	ENSPTRG00000021475	PRDM12	99	80.475	Pan_troglodytes
ENSELUG00000009905	prdm12b	91	86.310	ENSPANG00000025967	PRDM12	99	81.117	Papio_anubis
ENSELUG00000009905	prdm12b	89	82.335	ENSPKIG00000004305	PRDM12	94	82.635	Paramormyrops_kingsleyae
ENSELUG00000009905	prdm12b	100	90.374	ENSPKIG00000007228	prdm12b	100	90.374	Paramormyrops_kingsleyae
ENSELUG00000009905	prdm12b	100	83.019	ENSPSIG00000006739	PRDM12	99	83.019	Pelodiscus_sinensis
ENSELUG00000009905	prdm12b	100	81.720	ENSPMGG00000008867	prdm12b	99	82.620	Periophthalmus_magnuspinnatus
ENSELUG00000009905	prdm12b	100	74.937	ENSPMGG00000002356	-	100	75.696	Periophthalmus_magnuspinnatus
ENSELUG00000009905	prdm12b	94	83.286	ENSPEMG00000009969	Prdm12	95	83.286	Peromyscus_maniculatus_bairdii
ENSELUG00000009905	prdm12b	100	83.065	ENSPCIG00000024119	PRDM12	99	83.065	Phascolarctos_cinereus
ENSELUG00000009905	prdm12b	100	81.432	ENSPFOG00000019841	prdm12b	100	81.432	Poecilia_formosa
ENSELUG00000009905	prdm12b	100	80.263	ENSPLAG00000016626	prdm12b	99	80.789	Poecilia_latipinna
ENSELUG00000009905	prdm12b	98	79.784	ENSPMEG00000016698	prdm12b	100	80.054	Poecilia_mexicana
ENSELUG00000009905	prdm12b	95	74.515	ENSPREG00000003211	-	94	74.515	Poecilia_reticulata
ENSELUG00000009905	prdm12b	100	80.315	ENSPREG00000015073	prdm12b	99	80.418	Poecilia_reticulata
ENSELUG00000009905	prdm12b	90	86.567	ENSPPYG00000019694	PRDM12	93	86.567	Pongo_abelii
ENSELUG00000009905	prdm12b	91	85.417	ENSPCOG00000022255	PRDM12	99	79.420	Propithecus_coquereli
ENSELUG00000009905	prdm12b	91	85.417	ENSPVAG00000001511	PRDM12	99	79.683	Pteropus_vampyrus
ENSELUG00000009905	prdm12b	100	77.468	ENSPNYG00000013589	-	100	79.494	Pundamilia_nyererei
ENSELUG00000009905	prdm12b	100	81.316	ENSPNYG00000009607	prdm12b	100	82.105	Pundamilia_nyererei
ENSELUG00000009905	prdm12b	100	77.573	ENSPNAG00000013396	PRDM12	100	77.573	Pygocentrus_nattereri
ENSELUG00000009905	prdm12b	100	87.332	ENSPNAG00000024532	prdm12b	100	87.332	Pygocentrus_nattereri
ENSELUG00000009905	prdm12b	91	86.310	ENSRNOG00000009218	Prdm12	99	80.423	Rattus_norvegicus
ENSELUG00000009905	prdm12b	87	86.728	ENSRBIG00000042712	PRDM12	98	80.441	Rhinopithecus_bieti
ENSELUG00000009905	prdm12b	88	86.890	ENSRROG00000043554	PRDM12	99	86.890	Rhinopithecus_roxellana
ENSELUG00000009905	prdm12b	100	82.842	ENSSHAG00000015972	PRDM12	99	82.842	Sarcophilus_harrisii
ENSELUG00000009905	prdm12b	100	77.635	ENSSMAG00000003754	prdm12b	100	78.827	Scophthalmus_maximus
ENSELUG00000009905	prdm12b	100	80.628	ENSSDUG00000019071	-	100	82.199	Seriola_dumerili
ENSELUG00000009905	prdm12b	100	81.137	ENSSDUG00000023498	prdm12b	100	81.137	Seriola_dumerili
ENSELUG00000009905	prdm12b	100	81.510	ENSSLDG00000009557	prdm12b	100	81.510	Seriola_lalandi_dorsalis
ENSELUG00000009905	prdm12b	100	78.706	ENSSLDG00000013562	-	100	78.706	Seriola_lalandi_dorsalis
ENSELUG00000009905	prdm12b	100	83.558	ENSSPUG00000013424	PRDM12	99	83.558	Sphenodon_punctatus
ENSELUG00000009905	prdm12b	100	82.677	ENSSPAG00000018824	prdm12b	100	82.677	Stegastes_partitus
ENSELUG00000009905	prdm12b	100	72.798	ENSSPAG00000022420	-	100	74.611	Stegastes_partitus
ENSELUG00000009905	prdm12b	91	85.417	ENSSSCG00000005703	PRDM12	99	80.106	Sus_scrofa
ENSELUG00000009905	prdm12b	100	81.067	ENSTRUG00000018659	prdm12b	100	82.133	Takifugu_rubripes
ENSELUG00000009905	prdm12b	100	79.144	ENSTRUG00000013239	-	100	79.144	Takifugu_rubripes
ENSELUG00000009905	prdm12b	100	74.667	ENSTNIG00000005859	-	99	74.667	Tetraodon_nigroviridis
ENSELUG00000009905	prdm12b	100	80.429	ENSTNIG00000009020	prdm12b	99	80.800	Tetraodon_nigroviridis
ENSELUG00000009905	prdm12b	91	85.417	ENSUAMG00000009653	PRDM12	93	83.908	Ursus_americanus
ENSELUG00000009905	prdm12b	91	85.417	ENSVVUG00000027662	PRDM12	78	85.417	Vulpes_vulpes
ENSELUG00000009905	prdm12b	100	81.600	ENSXCOG00000002836	prdm12b	99	81.867	Xiphophorus_couchianus
ENSELUG00000009905	prdm12b	100	81.333	ENSXMAG00000005537	prdm12b	100	81.600	Xiphophorus_maculatus
ENSELUG00000009905	prdm12b	100	76.154	ENSXMAG00000028012	-	100	77.692	Xiphophorus_maculatus