EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000009909 (Gene tree)
Gene ID: 105026058
Gene Symbol: scaf4a
Alias: fa96d07|si:dkey-50p8.3|wu:fa96d07
Full Name: SR-related CTD associated factor 4
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 15944 bases
Position: chrLG07:35354037-35369980
Accession: 105026058
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000032119	RRM_1	PF00076.22	8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000004034	-	5911	XM_020048002	ENSELUP00000032119	1239 (aa)	XP_019903561	-

Gene Model

Click here to download ENSELUG00000009909's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000009909's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000009909	scaf4a	77	84.817	ENSAPOG00000002946	scaf4a	56	83.854	Acanthochromis_polyacanthus
ENSELUG00000009909	scaf4a	89	85.340	ENSAOCG00000000615	scaf4a	55	84.375	Amphiprion_ocellaris
ENSELUG00000009909	scaf4a	92	82.883	ENSAPEG00000021229	scaf4a	56	84.375	Amphiprion_percula
ENSELUG00000009909	scaf4a	61	82.474	ENSAMXG00000008585	scaf4a	80	82.051	Astyanax_mexicanus
ENSELUG00000009909	scaf4a	91	78.307	ENSCSEG00000019549	scaf4a	77	77.604	Cynoglossus_semilaevis
ENSELUG00000009909	scaf4a	57	81.152	ENSFHEG00000017866	scaf4a	66	80.729	Fundulus_heteroclitus
ENSELUG00000009909	scaf4a	58	79.695	ENSGMOG00000015188	scaf4a	53	79.167	Gadus_morhua
ENSELUG00000009909	scaf4a	56	84.817	ENSGAFG00000019460	scaf4a	57	84.375	Gambusia_affinis
ENSELUG00000009909	scaf4a	52	82.812	ENSGACG00000020580	scaf4a	63	82.292	Gasterosteus_aculeatus
ENSELUG00000009909	scaf4a	89	84.817	ENSHBUG00000007920	scaf4a	78	83.854	Haplochromis_burtoni
ENSELUG00000009909	scaf4a	78	80.603	ENSIPUG00000011285	scaf4	55	82.564	Ictalurus_punctatus
ENSELUG00000009909	scaf4a	79	78.173	ENSLBEG00000014675	scaf4a	76	79.641	Labrus_bergylta
ENSELUG00000009909	scaf4a	67	78.392	ENSLOCG00000009162	scaf4a	83	75.879	Lepisosteus_oculatus
ENSELUG00000009909	scaf4a	69	50.383	ENSMAMG00000013223	scaf4a	73	52.725	Mastacembelus_armatus
ENSELUG00000009909	scaf4a	93	81.900	ENSMZEG00005024349	scaf4a	78	83.854	Maylandia_zebra
ENSELUG00000009909	scaf4a	89	84.817	ENSONIG00000004687	scaf4a	86	83.854	Oreochromis_niloticus
ENSELUG00000009909	scaf4a	73	82.432	ENSORLG00020011857	scaf4a	61	82.432	Oryzias_latipes_hni
ENSELUG00000009909	scaf4a	73	82.883	ENSORLG00015017880	scaf4a	78	82.432	Oryzias_latipes_hsok
ENSELUG00000009909	scaf4a	52	83.673	ENSPKIG00000022408	scaf4a	54	81.218	Paramormyrops_kingsleyae
ENSELUG00000009909	scaf4a	65	74.317	ENSPSIG00000014242	SCAF4	54	73.913	Pelodiscus_sinensis
ENSELUG00000009909	scaf4a	67	69.744	ENSPMGG00000016741	scaf4a	63	66.255	Periophthalmus_magnuspinnatus
ENSELUG00000009909	scaf4a	77	82.063	ENSPFOG00000017156	scaf4a	64	83.854	Poecilia_formosa
ENSELUG00000009909	scaf4a	61	75.984	ENSPLAG00000001972	scaf4a	63	83.854	Poecilia_latipinna
ENSELUG00000009909	scaf4a	63	82.474	ENSPNAG00000016892	scaf4a	81	78.974	Pygocentrus_nattereri
ENSELUG00000009909	scaf4a	89	78.667	ENSSMAG00000017901	scaf4a	50	82.812	Scophthalmus_maximus
ENSELUG00000009909	scaf4a	93	80.000	ENSSDUG00000012918	scaf4a	79	80.000	Seriola_dumerili
ENSELUG00000009909	scaf4a	53	69.378	ENSSDUG00000012380	scaf4b	61	69.271	Seriola_dumerili
ENSELUG00000009909	scaf4a	53	69.378	ENSSLDG00000023152	-	61	69.271	Seriola_lalandi_dorsalis
ENSELUG00000009909	scaf4a	93	80.000	ENSSLDG00000021671	scaf4a	79	80.000	Seriola_lalandi_dorsalis