EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000010092 (Gene tree)
Gene ID: 105014836
Gene Symbol: snrpd3l (1 of many)
Alias: SMD3|Sm-D3
Full Name: small nuclear ribonucleoprotein Sm D3
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 5697 bases
Position: chrLG14:17956377-17962073
Accession: 105014836
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000009528	LSM	PF01423.22	1.7e-15	1	1
ENSELUP00000032242	LSM	PF01423.22	1.7e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000003705	-	1130	XM_010877467	ENSELUP00000009528	127 (aa)	XP_010875769	UPI0000337BC1
ENSELUT00000003716	-	1069	XM_010877473	ENSELUP00000032242	127 (aa)	XP_010875775	UPI0000337BC1

Gene Model

Click here to download ENSELUG00000010092's gene model file

Pathways

Pathway ID	Pathway Name	Source
els03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000010092's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000010092	snrpd3l	100	96.850	ENSELUG00000001854	snrpd3	100	96.850

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000010092	snrpd3l	100	98.425	ENSG00000100028	SNRPD3	100	98.425	Homo_sapiens
ENSELUG00000010092	snrpd3l	100	99.213	ENSAPOG00000007512	snrpd3l	100	99.213	Acanthochromis_polyacanthus
ENSELUG00000010092	snrpd3l	100	98.425	ENSAMEG00000013935	SNRPD3	100	98.425	Ailuropoda_melanoleuca
ENSELUG00000010092	snrpd3l	100	99.213	ENSACIG00000008871	snrpd3l	100	99.213	Amphilophus_citrinellus
ENSELUG00000010092	snrpd3l	100	99.213	ENSAOCG00000016743	snrpd3l	100	99.213	Amphiprion_ocellaris
ENSELUG00000010092	snrpd3l	100	99.213	ENSAOCG00000008497	SNRPD3	100	99.213	Amphiprion_ocellaris
ENSELUG00000010092	snrpd3l	83	100.000	ENSAOCG00000016759	-	98	100.000	Amphiprion_ocellaris
ENSELUG00000010092	snrpd3l	100	99.213	ENSAOCG00000022442	-	100	99.213	Amphiprion_ocellaris
ENSELUG00000010092	snrpd3l	100	99.213	ENSAPEG00000006273	snrpd3l	100	99.213	Amphiprion_percula
ENSELUG00000010092	snrpd3l	83	100.000	ENSAPEG00000006260	-	98	100.000	Amphiprion_percula
ENSELUG00000010092	snrpd3l	100	99.213	ENSATEG00000020556	snrpd3l	91	99.213	Anabas_testudineus
ENSELUG00000010092	snrpd3l	100	98.425	ENSAPLG00000008670	SNRPD3	100	98.425	Anas_platyrhynchos
ENSELUG00000010092	snrpd3l	100	98.425	ENSANAG00000026106	SNRPD3	100	98.425	Aotus_nancymaae
ENSELUG00000010092	snrpd3l	100	99.213	ENSACLG00000021295	snrpd3l	100	99.213	Astatotilapia_calliptera
ENSELUG00000010092	snrpd3l	100	96.875	ENSAMXG00000038984	snrpd3l	100	96.875	Astyanax_mexicanus
ENSELUG00000010092	snrpd3l	100	98.425	ENSBTAG00000021262	SNRPD3	100	98.425	Bos_taurus
ENSELUG00000010092	snrpd3l	90	63.478	WBGene00004914	snr-1	68	69.565	Caenorhabditis_elegans
ENSELUG00000010092	snrpd3l	100	98.425	ENSCJAG00000009630	SNRPD3	100	98.425	Callithrix_jacchus
ENSELUG00000010092	snrpd3l	100	97.638	ENSCAFG00000017258	-	100	97.638	Canis_familiaris
ENSELUG00000010092	snrpd3l	100	98.425	ENSCAFG00000013864	-	100	98.425	Canis_familiaris
ENSELUG00000010092	snrpd3l	100	98.425	ENSCAFG00020007165	-	100	98.425	Canis_lupus_dingo
ENSELUG00000010092	snrpd3l	100	98.425	ENSCHIG00000000057	SNRPD3	100	98.425	Capra_hircus
ENSELUG00000010092	snrpd3l	100	98.425	ENSTSYG00000007649	SNRPD3	100	98.425	Carlito_syrichta
ENSELUG00000010092	snrpd3l	100	98.425	ENSCAPG00000016432	-	100	98.425	Cavia_aperea
ENSELUG00000010092	snrpd3l	100	98.425	ENSCPOG00000033102	-	100	98.425	Cavia_porcellus
ENSELUG00000010092	snrpd3l	100	98.425	ENSCCAG00000035006	SNRPD3	100	98.425	Cebus_capucinus
ENSELUG00000010092	snrpd3l	100	98.425	ENSCATG00000038878	SNRPD3	100	98.425	Cercocebus_atys
ENSELUG00000010092	snrpd3l	100	98.425	ENSCLAG00000011403	SNRPD3	100	98.425	Chinchilla_lanigera
ENSELUG00000010092	snrpd3l	100	98.425	ENSCSAG00000010694	SNRPD3	100	98.425	Chlorocebus_sabaeus
ENSELUG00000010092	snrpd3l	100	98.425	ENSCPBG00000002065	SNRPD3	100	98.425	Chrysemys_picta_bellii
ENSELUG00000010092	snrpd3l	84	79.439	ENSCSAVG00000004708	-	80	79.439	Ciona_savignyi
ENSELUG00000010092	snrpd3l	100	98.425	ENSCANG00000032106	SNRPD3	100	98.425	Colobus_angolensis_palliatus
ENSELUG00000010092	snrpd3l	100	98.425	ENSCGRG00001021990	Snrpd3	100	98.425	Cricetulus_griseus_chok1gshd
ENSELUG00000010092	snrpd3l	100	98.425	ENSCGRG00000004280	Snrpd3	100	98.425	Cricetulus_griseus_crigri
ENSELUG00000010092	snrpd3l	100	99.213	ENSCVAG00000001276	snrpd3l	100	99.213	Cyprinodon_variegatus
ENSELUG00000010092	snrpd3l	100	96.875	ENSDARG00000076283	snrpd3l	100	96.875	Danio_rerio
ENSELUG00000010092	snrpd3l	100	95.276	ENSDARG00000013800	snrpd3	100	95.276	Danio_rerio
ENSELUG00000010092	snrpd3l	100	88.462	ENSDNOG00000018004	-	100	86.154	Dasypus_novemcinctus
ENSELUG00000010092	snrpd3l	100	98.425	ENSDNOG00000047424	-	100	98.425	Dasypus_novemcinctus
ENSELUG00000010092	snrpd3l	97	76.423	ENSDNOG00000042638	-	100	73.984	Dasypus_novemcinctus
ENSELUG00000010092	snrpd3l	100	83.465	ENSDORG00000027706	-	100	81.102	Dipodomys_ordii
ENSELUG00000010092	snrpd3l	87	90.090	ENSDORG00000002800	-	100	86.486	Dipodomys_ordii
ENSELUG00000010092	snrpd3l	100	73.228	ENSDORG00000027169	-	100	69.291	Dipodomys_ordii
ENSELUG00000010092	snrpd3l	83	83.962	FBgn0023167	SmD3	71	83.178	Drosophila_melanogaster
ENSELUG00000010092	snrpd3l	100	98.425	ENSEASG00005000273	SNRPD3	100	98.425	Equus_asinus_asinus
ENSELUG00000010092	snrpd3l	100	98.425	ENSECAG00000023316	SNRPD3	100	98.425	Equus_caballus
ENSELUG00000010092	snrpd3l	100	97.638	ENSEEUG00000015518	SNRPD3	100	97.638	Erinaceus_europaeus
ENSELUG00000010092	snrpd3l	100	98.425	ENSFCAG00000001512	SNRPD3	100	98.425	Felis_catus
ENSELUG00000010092	snrpd3l	100	98.425	ENSFALG00000007303	SNRPD3	100	98.425	Ficedula_albicollis
ENSELUG00000010092	snrpd3l	100	98.425	ENSFDAG00000010772	SNRPD3	100	98.425	Fukomys_damarensis
ENSELUG00000010092	snrpd3l	100	100.000	ENSFHEG00000010754	snrpd3l	100	100.000	Fundulus_heteroclitus
ENSELUG00000010092	snrpd3l	100	98.438	ENSGMOG00000008469	snrpd3l	100	98.438	Gadus_morhua
ENSELUG00000010092	snrpd3l	100	98.425	ENSGALG00000006596	SNRPD3	100	98.425	Gallus_gallus
ENSELUG00000010092	snrpd3l	83	100.000	ENSGAFG00000006661	snrpd3l	82	100.000	Gambusia_affinis
ENSELUG00000010092	snrpd3l	100	98.438	ENSGACG00000017533	snrpd3l	100	98.438	Gasterosteus_aculeatus
ENSELUG00000010092	snrpd3l	100	98.425	ENSGAGG00000023325	SNRPD3	100	98.425	Gopherus_agassizii
ENSELUG00000010092	snrpd3l	100	98.425	ENSGGOG00000015640	SNRPD3	100	98.425	Gorilla_gorilla
ENSELUG00000010092	snrpd3l	100	99.213	ENSHBUG00000001332	snrpd3l	100	99.213	Haplochromis_burtoni
ENSELUG00000010092	snrpd3l	100	98.425	ENSHGLG00000016496	SNRPD3	100	98.425	Heterocephalus_glaber_female
ENSELUG00000010092	snrpd3l	99	95.238	ENSHGLG00000009844	-	99	91.270	Heterocephalus_glaber_female
ENSELUG00000010092	snrpd3l	99	95.238	ENSHGLG00100011326	-	99	91.270	Heterocephalus_glaber_male
ENSELUG00000010092	snrpd3l	100	98.425	ENSHGLG00100019304	SNRPD3	100	98.425	Heterocephalus_glaber_male
ENSELUG00000010092	snrpd3l	100	98.425	ENSHCOG00000014396	snrpd3l	100	98.425	Hippocampus_comes
ENSELUG00000010092	snrpd3l	100	96.875	ENSIPUG00000003083	snrpd3	100	96.875	Ictalurus_punctatus
ENSELUG00000010092	snrpd3l	100	98.425	ENSSTOG00000025674	SNRPD3	100	98.425	Ictidomys_tridecemlineatus
ENSELUG00000010092	snrpd3l	100	98.425	ENSJJAG00000013303	Snrpd3	100	98.425	Jaculus_jaculus
ENSELUG00000010092	snrpd3l	100	100.000	ENSKMAG00000012493	snrpd3l	100	100.000	Kryptolebias_marmoratus
ENSELUG00000010092	snrpd3l	100	99.213	ENSLBEG00000003202	snrpd3l	100	99.213	Labrus_bergylta
ENSELUG00000010092	snrpd3l	100	97.638	ENSLACG00000015192	SNRPD3	100	97.638	Latimeria_chalumnae
ENSELUG00000010092	snrpd3l	100	99.213	ENSLOCG00000006978	snrpd3	100	99.213	Lepisosteus_oculatus
ENSELUG00000010092	snrpd3l	100	98.425	ENSLAFG00000028180	SNRPD3	100	98.425	Loxodonta_africana
ENSELUG00000010092	snrpd3l	100	98.425	ENSMFAG00000033628	SNRPD3	100	98.425	Macaca_fascicularis
ENSELUG00000010092	snrpd3l	100	98.425	ENSMMUG00000000264	SNRPD3	100	98.425	Macaca_mulatta
ENSELUG00000010092	snrpd3l	100	98.425	ENSMNEG00000020857	SNRPD3	100	98.425	Macaca_nemestrina
ENSELUG00000010092	snrpd3l	100	98.425	ENSMLEG00000037548	SNRPD3	100	98.425	Mandrillus_leucophaeus
ENSELUG00000010092	snrpd3l	100	99.213	ENSMZEG00005017664	snrpd3l	100	99.213	Maylandia_zebra
ENSELUG00000010092	snrpd3l	100	98.425	ENSMAUG00000021393	Snrpd3	100	98.425	Mesocricetus_auratus
ENSELUG00000010092	snrpd3l	100	98.425	ENSMICG00000034782	SNRPD3	100	98.425	Microcebus_murinus
ENSELUG00000010092	snrpd3l	100	98.425	ENSMOCG00000009361	Snrpd3	100	98.425	Microtus_ochrogaster
ENSELUG00000010092	snrpd3l	83	100.000	ENSMMOG00000020985	snrpd3l	67	100.000	Mola_mola
ENSELUG00000010092	snrpd3l	100	98.425	ENSMODG00000004024	SNRPD3	100	98.425	Monodelphis_domestica
ENSELUG00000010092	snrpd3l	100	99.213	ENSMALG00000013334	snrpd3l	100	99.213	Monopterus_albus
ENSELUG00000010092	snrpd3l	100	98.425	MGP_CAROLIEiJ_G0015441	Snrpd3	100	98.425	Mus_caroli
ENSELUG00000010092	snrpd3l	100	98.425	ENSMUSG00000020180	Snrpd3	100	98.425	Mus_musculus
ENSELUG00000010092	snrpd3l	100	98.425	MGP_PahariEiJ_G0030857	Snrpd3	100	98.425	Mus_pahari
ENSELUG00000010092	snrpd3l	100	98.425	MGP_SPRETEiJ_G0016254	Snrpd3	100	98.425	Mus_spretus
ENSELUG00000010092	snrpd3l	100	98.425	ENSMPUG00000002889	SNRPD3	100	98.425	Mustela_putorius_furo
ENSELUG00000010092	snrpd3l	100	98.425	ENSMLUG00000009838	SNRPD3	100	98.425	Myotis_lucifugus
ENSELUG00000010092	snrpd3l	100	98.425	ENSNGAG00000010328	Snrpd3	100	98.425	Nannospalax_galili
ENSELUG00000010092	snrpd3l	100	99.213	ENSNBRG00000020307	snrpd3l	100	99.213	Neolamprologus_brichardi
ENSELUG00000010092	snrpd3l	100	98.425	ENSNLEG00000035757	SNRPD3	100	98.425	Nomascus_leucogenys
ENSELUG00000010092	snrpd3l	100	98.425	ENSMEUG00000003772	SNRPD3	100	98.425	Notamacropus_eugenii
ENSELUG00000010092	snrpd3l	100	98.425	ENSOPRG00000005763	SNRPD3	100	98.425	Ochotona_princeps
ENSELUG00000010092	snrpd3l	100	97.638	ENSODEG00000019354	-	100	97.638	Octodon_degus
ENSELUG00000010092	snrpd3l	100	98.425	ENSODEG00000008064	-	100	98.425	Octodon_degus
ENSELUG00000010092	snrpd3l	100	95.276	ENSODEG00000020162	-	100	95.276	Octodon_degus
ENSELUG00000010092	snrpd3l	100	99.213	ENSONIG00000003828	snrpd3l	100	99.213	Oreochromis_niloticus
ENSELUG00000010092	snrpd3l	100	98.425	ENSOANG00000002463	SNRPD3	100	98.425	Ornithorhynchus_anatinus
ENSELUG00000010092	snrpd3l	100	98.425	ENSOCUG00000004845	SNRPD3	100	98.425	Oryctolagus_cuniculus
ENSELUG00000010092	snrpd3l	100	99.213	ENSORLG00000010586	snrpd3l	100	99.213	Oryzias_latipes
ENSELUG00000010092	snrpd3l	100	99.213	ENSORLG00020011769	snrpd3l	100	99.213	Oryzias_latipes_hni
ENSELUG00000010092	snrpd3l	100	99.213	ENSORLG00015022940	snrpd3l	100	99.213	Oryzias_latipes_hsok
ENSELUG00000010092	snrpd3l	100	100.000	ENSOMEG00000022734	snrpd3l	100	100.000	Oryzias_melastigma
ENSELUG00000010092	snrpd3l	100	98.425	ENSOGAG00000012708	SNRPD3	100	98.425	Otolemur_garnettii
ENSELUG00000010092	snrpd3l	100	98.425	ENSOARG00000013984	SNRPD3	100	98.425	Ovis_aries
ENSELUG00000010092	snrpd3l	100	98.425	ENSPPAG00000039191	SNRPD3	100	98.425	Pan_paniscus
ENSELUG00000010092	snrpd3l	100	98.425	ENSPPRG00000001470	SNRPD3	100	98.425	Panthera_pardus
ENSELUG00000010092	snrpd3l	100	98.425	ENSPTIG00000016610	SNRPD3	100	98.425	Panthera_tigris_altaica
ENSELUG00000010092	snrpd3l	100	98.425	ENSPTRG00000014176	SNRPD3	100	98.425	Pan_troglodytes
ENSELUG00000010092	snrpd3l	100	98.425	ENSPANG00000009279	SNRPD3	100	98.425	Papio_anubis
ENSELUG00000010092	snrpd3l	100	98.425	ENSPKIG00000006412	snrpd3l	100	98.425	Paramormyrops_kingsleyae
ENSELUG00000010092	snrpd3l	100	96.850	ENSPSIG00000010022	-	100	96.850	Pelodiscus_sinensis
ENSELUG00000010092	snrpd3l	98	97.581	ENSPMGG00000004486	snrpd3l	100	97.581	Periophthalmus_magnuspinnatus
ENSELUG00000010092	snrpd3l	100	98.425	ENSPCIG00000010910	SNRPD3	84	98.425	Phascolarctos_cinereus
ENSELUG00000010092	snrpd3l	100	100.000	ENSPFOG00000019673	snrpd3l	100	100.000	Poecilia_formosa
ENSELUG00000010092	snrpd3l	100	100.000	ENSPLAG00000023249	snrpd3l	100	100.000	Poecilia_latipinna
ENSELUG00000010092	snrpd3l	100	100.000	ENSPMEG00000008482	snrpd3l	100	100.000	Poecilia_mexicana
ENSELUG00000010092	snrpd3l	97	89.431	ENSPREG00000007532	snrpd3l	98	89.431	Poecilia_reticulata
ENSELUG00000010092	snrpd3l	100	98.425	ENSPPYG00000011648	SNRPD3	100	98.425	Pongo_abelii
ENSELUG00000010092	snrpd3l	100	98.425	ENSPCAG00000002065	SNRPD3	100	98.425	Procavia_capensis
ENSELUG00000010092	snrpd3l	100	98.425	ENSPCOG00000011842	SNRPD3	100	98.425	Propithecus_coquereli
ENSELUG00000010092	snrpd3l	100	97.638	ENSPVAG00000011405	SNRPD3	100	97.638	Pteropus_vampyrus
ENSELUG00000010092	snrpd3l	100	99.213	ENSPNYG00000013344	snrpd3l	100	99.213	Pundamilia_nyererei
ENSELUG00000010092	snrpd3l	100	96.094	ENSPNAG00000008683	snrpd3l	100	96.094	Pygocentrus_nattereri
ENSELUG00000010092	snrpd3l	100	96.063	ENSPNAG00000010547	snrpd3	100	96.063	Pygocentrus_nattereri
ENSELUG00000010092	snrpd3l	100	98.425	ENSRNOG00000050410	Snrpd3	100	98.425	Rattus_norvegicus
ENSELUG00000010092	snrpd3l	100	98.425	ENSRBIG00000029017	SNRPD3	100	98.425	Rhinopithecus_bieti
ENSELUG00000010092	snrpd3l	100	98.425	ENSRROG00000031152	SNRPD3	100	98.425	Rhinopithecus_roxellana
ENSELUG00000010092	snrpd3l	75	47.368	YLR147C	SMD3	92	47.368	Saccharomyces_cerevisiae
ENSELUG00000010092	snrpd3l	100	96.850	ENSSFOG00015014180	snrpd3l	100	96.850	Scleropages_formosus
ENSELUG00000010092	snrpd3l	100	98.425	ENSSFOG00015007002	snrpd3l	100	98.425	Scleropages_formosus
ENSELUG00000010092	snrpd3l	100	99.213	ENSSMAG00000019307	snrpd3l	100	99.213	Scophthalmus_maximus
ENSELUG00000010092	snrpd3l	100	99.213	ENSSDUG00000006870	snrpd3l	100	99.213	Seriola_dumerili
ENSELUG00000010092	snrpd3l	100	99.213	ENSSLDG00000022664	snrpd3l	100	99.213	Seriola_lalandi_dorsalis
ENSELUG00000010092	snrpd3l	100	98.425	ENSSARG00000002357	SNRPD3	100	98.425	Sorex_araneus
ENSELUG00000010092	snrpd3l	100	97.638	ENSSPUG00000014285	SNRPD3	100	97.638	Sphenodon_punctatus
ENSELUG00000010092	snrpd3l	100	98.425	ENSSSCG00000010058	SNRPD3	100	98.425	Sus_scrofa
ENSELUG00000010092	snrpd3l	100	98.425	ENSTGUG00000010079	SNRPD3	100	98.425	Taeniopygia_guttata
ENSELUG00000010092	snrpd3l	83	100.000	ENSTRUG00000023976	snrpd3l	90	100.000	Takifugu_rubripes
ENSELUG00000010092	snrpd3l	100	100.000	ENSTNIG00000005323	snrpd3l	100	100.000	Tetraodon_nigroviridis
ENSELUG00000010092	snrpd3l	100	98.425	ENSTBEG00000014334	SNRPD3	100	98.425	Tupaia_belangeri
ENSELUG00000010092	snrpd3l	100	98.425	ENSTTRG00000006022	SNRPD3	100	98.425	Tursiops_truncatus
ENSELUG00000010092	snrpd3l	100	98.425	ENSUAMG00000010767	SNRPD3	100	98.425	Ursus_americanus
ENSELUG00000010092	snrpd3l	100	98.425	ENSUMAG00000001670	SNRPD3	100	98.425	Ursus_maritimus
ENSELUG00000010092	snrpd3l	100	98.425	ENSVPAG00000000241	SNRPD3	100	98.425	Vicugna_pacos
ENSELUG00000010092	snrpd3l	83	100.000	ENSVVUG00000019340	SNRPD3	53	100.000	Vulpes_vulpes
ENSELUG00000010092	snrpd3l	100	82.171	ENSXETG00000024918	snrpd3	100	78.295	Xenopus_tropicalis
ENSELUG00000010092	snrpd3l	100	100.000	ENSXCOG00000004795	snrpd3l	100	100.000	Xiphophorus_couchianus
ENSELUG00000010092	snrpd3l	100	100.000	ENSXMAG00000001133	snrpd3l	100	100.000	Xiphophorus_maculatus