EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000010112 (Gene tree)
Gene ID: 105024819
Gene Symbol: rnaseh1
Alias: zgc:91971
Full Name: ribonuclease H1
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 2735 bases
Position: chrLG18:7902812-7905546
Accession: 105024819
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000009540	RNase_H	PF00075.24	4.4e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000003669	-	1170	XM_010895045	ENSELUP00000009540	298 (aa)	XP_010893347	UPI0005771B92

Gene Model

Click here to download ENSELUG00000010112's gene model file

Pathways

Pathway ID	Pathway Name	Source
els03030	DNA replication	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000010112's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000010112	rnaseh1	90	55.109	ENSG00000171865	RNASEH1	89	55.109	Homo_sapiens
ENSELUG00000010112	rnaseh1	99	69.565	ENSAPOG00000000412	rnaseh1	97	69.565	Acanthochromis_polyacanthus
ENSELUG00000010112	rnaseh1	90	54.244	ENSAMEG00000018433	RNASEH1	98	51.689	Ailuropoda_melanoleuca
ENSELUG00000010112	rnaseh1	99	70.847	ENSACIG00000014666	rnaseh1	96	70.847	Amphilophus_citrinellus
ENSELUG00000010112	rnaseh1	99	70.234	ENSAOCG00000015210	rnaseh1	97	70.234	Amphiprion_ocellaris
ENSELUG00000010112	rnaseh1	99	71.237	ENSAPEG00000014104	rnaseh1	97	71.237	Amphiprion_percula
ENSELUG00000010112	rnaseh1	99	71.906	ENSATEG00000000598	rnaseh1	96	73.381	Anabas_testudineus
ENSELUG00000010112	rnaseh1	86	55.172	ENSAPLG00000001961	RNASEH1	100	55.172	Anas_platyrhynchos
ENSELUG00000010112	rnaseh1	90	51.689	ENSACAG00000016857	rnaseh1	91	51.689	Anolis_carolinensis
ENSELUG00000010112	rnaseh1	90	55.351	ENSANAG00000024055	RNASEH1	89	55.351	Aotus_nancymaae
ENSELUG00000010112	rnaseh1	99	69.565	ENSACLG00000006741	rnaseh1	96	70.234	Astatotilapia_calliptera
ENSELUG00000010112	rnaseh1	99	54.237	ENSAMXG00000042940	rnaseh1	97	58.909	Astyanax_mexicanus
ENSELUG00000010112	rnaseh1	98	53.443	ENSBTAG00000016235	RNASEH1	98	53.443	Bos_taurus
ENSELUG00000010112	rnaseh1	89	36.567	WBGene00004382	rnh-1.0	95	36.567	Caenorhabditis_elegans
ENSELUG00000010112	rnaseh1	90	53.818	ENSCJAG00000035450	RNASEH1	89	53.818	Callithrix_jacchus
ENSELUG00000010112	rnaseh1	98	50.680	ENSCAFG00000003259	RNASEH1	98	50.680	Canis_familiaris
ENSELUG00000010112	rnaseh1	50	63.758	ENSCAFG00020004994	RNASEH1	96	63.758	Canis_lupus_dingo
ENSELUG00000010112	rnaseh1	98	52.862	ENSCHIG00000022264	-	98	52.862	Capra_hircus
ENSELUG00000010112	rnaseh1	82	40.698	ENSCHIG00000022230	-	98	40.698	Capra_hircus
ENSELUG00000010112	rnaseh1	99	51.351	ENSTSYG00000012926	RNASEH1	98	51.351	Carlito_syrichta
ENSELUG00000010112	rnaseh1	84	55.200	ENSCAPG00000004813	RNASEH1	98	55.200	Cavia_aperea
ENSELUG00000010112	rnaseh1	91	54.815	ENSCPOG00000022278	Rnaseh1	87	54.815	Cavia_porcellus
ENSELUG00000010112	rnaseh1	90	54.945	ENSCCAG00000038017	RNASEH1	89	54.945	Cebus_capucinus
ENSELUG00000010112	rnaseh1	90	54.212	ENSCATG00000016515	-	89	54.212	Cercocebus_atys
ENSELUG00000010112	rnaseh1	90	48.315	ENSCATG00000016818	-	89	48.315	Cercocebus_atys
ENSELUG00000010112	rnaseh1	95	53.684	ENSCLAG00000002440	RNASEH1	95	53.684	Chinchilla_lanigera
ENSELUG00000010112	rnaseh1	90	54.613	ENSCSAG00000006943	RNASEH1	89	54.613	Chlorocebus_sabaeus
ENSELUG00000010112	rnaseh1	61	60.773	ENSCHOG00000008547	RNASEH1	87	60.773	Choloepus_hoffmanni
ENSELUG00000010112	rnaseh1	91	53.957	ENSCPBG00000021620	RNASEH1	100	53.957	Chrysemys_picta_bellii
ENSELUG00000010112	rnaseh1	97	37.333	ENSCING00000014054	-	97	37.333	Ciona_intestinalis
ENSELUG00000010112	rnaseh1	77	38.197	ENSCSAVG00000000009	-	96	38.197	Ciona_savignyi
ENSELUG00000010112	rnaseh1	90	54.613	ENSCANG00000037763	RNASEH1	89	54.613	Colobus_angolensis_palliatus
ENSELUG00000010112	rnaseh1	97	53.472	ENSCGRG00001008950	Rnaseh1	94	53.472	Cricetulus_griseus_chok1gshd
ENSELUG00000010112	rnaseh1	97	53.472	ENSCGRG00000006029	Rnaseh1	94	53.472	Cricetulus_griseus_crigri
ENSELUG00000010112	rnaseh1	99	62.963	ENSCSEG00000005741	rnaseh1	95	67.857	Cynoglossus_semilaevis
ENSELUG00000010112	rnaseh1	99	67.333	ENSCVAG00000018717	rnaseh1	97	67.333	Cyprinodon_variegatus
ENSELUG00000010112	rnaseh1	91	66.544	ENSDARG00000042571	rnaseh1	98	66.544	Danio_rerio
ENSELUG00000010112	rnaseh1	96	52.431	ENSDNOG00000016056	RNASEH1	94	52.431	Dasypus_novemcinctus
ENSELUG00000010112	rnaseh1	90	54.104	ENSDORG00000000704	Rnaseh1	89	54.104	Dipodomys_ordii
ENSELUG00000010112	rnaseh1	90	38.225	FBgn0023171	rnh1	92	38.225	Drosophila_melanogaster
ENSELUG00000010112	rnaseh1	90	52.045	ENSETEG00000012674	RNASEH1	89	52.045	Echinops_telfairi
ENSELUG00000010112	rnaseh1	90	46.392	ENSEBUG00000008898	rnaseh1	98	46.392	Eptatretus_burgeri
ENSELUG00000010112	rnaseh1	90	43.494	ENSEBUG00000006116	rnaseh1	78	43.494	Eptatretus_burgeri
ENSELUG00000010112	rnaseh1	98	53.691	ENSEASG00005022200	RNASEH1	97	53.691	Equus_asinus_asinus
ENSELUG00000010112	rnaseh1	98	53.691	ENSECAG00000020695	RNASEH1	97	53.691	Equus_caballus
ENSELUG00000010112	rnaseh1	97	50.338	ENSFCAG00000025832	RNASEH1	98	50.338	Felis_catus
ENSELUG00000010112	rnaseh1	90	55.957	ENSFALG00000002069	RNASEH1	92	55.755	Ficedula_albicollis
ENSELUG00000010112	rnaseh1	98	50.169	ENSFDAG00000002035	RNASEH1	87	50.169	Fukomys_damarensis
ENSELUG00000010112	rnaseh1	99	66.554	ENSGMOG00000013818	rnaseh1	99	66.554	Gadus_morhua
ENSELUG00000010112	rnaseh1	91	57.609	ENSGALG00000016389	RNASEH1	92	57.609	Gallus_gallus
ENSELUG00000010112	rnaseh1	99	65.116	ENSGAFG00000001776	rnaseh1	99	65.116	Gambusia_affinis
ENSELUG00000010112	rnaseh1	99	71.192	ENSGACG00000011935	rnaseh1	99	71.192	Gasterosteus_aculeatus
ENSELUG00000010112	rnaseh1	91	56.159	ENSGAGG00000009150	RNASEH1	62	56.159	Gopherus_agassizii
ENSELUG00000010112	rnaseh1	90	55.474	ENSGGOG00000034822	RNASEH1	89	55.474	Gorilla_gorilla
ENSELUG00000010112	rnaseh1	99	69.231	ENSHBUG00000004666	rnaseh1	96	69.900	Haplochromis_burtoni
ENSELUG00000010112	rnaseh1	98	50.340	ENSHGLG00000002585	Rnaseh1	91	50.340	Heterocephalus_glaber_female
ENSELUG00000010112	rnaseh1	98	50.340	ENSHGLG00100005105	Rnaseh1	91	50.340	Heterocephalus_glaber_male
ENSELUG00000010112	rnaseh1	99	65.789	ENSHCOG00000012329	rnaseh1	98	66.776	Hippocampus_comes
ENSELUG00000010112	rnaseh1	99	61.824	ENSIPUG00000023060	rnaseh1	98	63.603	Ictalurus_punctatus
ENSELUG00000010112	rnaseh1	90	53.676	ENSSTOG00000012774	RNASEH1	91	53.676	Ictidomys_tridecemlineatus
ENSELUG00000010112	rnaseh1	88	45.038	ENSJJAG00000008994	-	89	45.038	Jaculus_jaculus
ENSELUG00000010112	rnaseh1	92	50.909	ENSJJAG00000021481	-	91	50.909	Jaculus_jaculus
ENSELUG00000010112	rnaseh1	90	50.187	ENSJJAG00000020238	Rnaseh1	99	50.187	Jaculus_jaculus
ENSELUG00000010112	rnaseh1	98	67.010	ENSKMAG00000001373	rnaseh1	96	67.010	Kryptolebias_marmoratus
ENSELUG00000010112	rnaseh1	98	69.048	ENSLBEG00000004480	rnaseh1	98	71.583	Labrus_bergylta
ENSELUG00000010112	rnaseh1	95	53.378	ENSLACG00000007100	RNASEH1	95	54.392	Latimeria_chalumnae
ENSELUG00000010112	rnaseh1	92	61.957	ENSLOCG00000017212	rnaseh1	99	61.957	Lepisosteus_oculatus
ENSELUG00000010112	rnaseh1	90	55.431	ENSLAFG00000015091	RNASEH1	89	55.431	Loxodonta_africana
ENSELUG00000010112	rnaseh1	90	49.270	ENSMFAG00000002323	-	90	49.270	Macaca_fascicularis
ENSELUG00000010112	rnaseh1	90	54.982	ENSMFAG00000000063	-	89	54.982	Macaca_fascicularis
ENSELUG00000010112	rnaseh1	90	49.455	ENSMMUG00000019280	-	89	49.455	Macaca_mulatta
ENSELUG00000010112	rnaseh1	90	49.097	ENSMNEG00000029676	-	90	49.097	Macaca_nemestrina
ENSELUG00000010112	rnaseh1	90	55.351	ENSMNEG00000040183	-	89	55.351	Macaca_nemestrina
ENSELUG00000010112	rnaseh1	90	50.558	ENSMLEG00000028662	-	90	50.558	Mandrillus_leucophaeus
ENSELUG00000010112	rnaseh1	84	54.331	ENSMLEG00000039352	-	98	54.331	Mandrillus_leucophaeus
ENSELUG00000010112	rnaseh1	99	67.224	ENSMAMG00000019725	rnaseh1	95	69.065	Mastacembelus_armatus
ENSELUG00000010112	rnaseh1	99	69.565	ENSMZEG00005013006	rnaseh1	96	70.234	Maylandia_zebra
ENSELUG00000010112	rnaseh1	81	56.175	ENSMGAG00000013979	RNASEH1	99	56.175	Meleagris_gallopavo
ENSELUG00000010112	rnaseh1	98	50.676	ENSMAUG00000014957	Rnaseh1	96	50.676	Mesocricetus_auratus
ENSELUG00000010112	rnaseh1	98	52.703	ENSMICG00000033156	RNASEH1	97	52.703	Microcebus_murinus
ENSELUG00000010112	rnaseh1	96	51.748	ENSMOCG00000015522	Rnaseh1	93	51.748	Microtus_ochrogaster
ENSELUG00000010112	rnaseh1	98	70.408	ENSMMOG00000015902	rnaseh1	96	70.408	Mola_mola
ENSELUG00000010112	rnaseh1	80	49.378	ENSMODG00000028814	-	91	50.628	Monodelphis_domestica
ENSELUG00000010112	rnaseh1	90	54.044	ENSMODG00000014491	-	89	54.044	Monodelphis_domestica
ENSELUG00000010112	rnaseh1	99	70.000	ENSMALG00000010565	rnaseh1	97	70.000	Monopterus_albus
ENSELUG00000010112	rnaseh1	98	51.195	MGP_CAROLIEiJ_G0017660	Rnaseh1	98	51.195	Mus_caroli
ENSELUG00000010112	rnaseh1	98	51.536	ENSMUSG00000020630	Rnaseh1	98	51.536	Mus_musculus
ENSELUG00000010112	rnaseh1	95	52.297	MGP_PahariEiJ_G0029418	Rnaseh1	92	52.297	Mus_pahari
ENSELUG00000010112	rnaseh1	97	52.069	MGP_SPRETEiJ_G0018502	Rnaseh1	97	52.069	Mus_spretus
ENSELUG00000010112	rnaseh1	61	52.821	ENSMPUG00000012984	RNASEH1	95	52.821	Mustela_putorius_furo
ENSELUG00000010112	rnaseh1	94	52.941	ENSNGAG00000015966	Rnaseh1	89	52.941	Nannospalax_galili
ENSELUG00000010112	rnaseh1	99	69.565	ENSNBRG00000008739	rnaseh1	96	70.234	Neolamprologus_brichardi
ENSELUG00000010112	rnaseh1	83	48.606	ENSNLEG00000000059	-	88	48.606	Nomascus_leucogenys
ENSELUG00000010112	rnaseh1	90	48.718	ENSNLEG00000015400	RNASEH1	87	48.718	Nomascus_leucogenys
ENSELUG00000010112	rnaseh1	76	43.172	ENSMEUG00000003610	-	74	43.172	Notamacropus_eugenii
ENSELUG00000010112	rnaseh1	97	48.805	ENSOPRG00000005072	RNASEH1	98	48.805	Ochotona_princeps
ENSELUG00000010112	rnaseh1	94	52.982	ENSODEG00000000235	Rnaseh1	92	52.982	Octodon_degus
ENSELUG00000010112	rnaseh1	92	73.022	ENSONIG00000018697	rnaseh1	99	73.022	Oreochromis_niloticus
ENSELUG00000010112	rnaseh1	90	53.532	ENSOCUG00000006117	RNASEH1	94	51.379	Oryctolagus_cuniculus
ENSELUG00000010112	rnaseh1	92	71.898	ENSORLG00000018127	rnaseh1	96	72.628	Oryzias_latipes
ENSELUG00000010112	rnaseh1	99	68.581	ENSORLG00020013660	rnaseh1	97	69.257	Oryzias_latipes_hni
ENSELUG00000010112	rnaseh1	99	67.905	ENSORLG00015011338	rnaseh1	97	69.463	Oryzias_latipes_hsok
ENSELUG00000010112	rnaseh1	91	66.790	ENSOMEG00000004710	rnaseh1	99	66.790	Oryzias_melastigma
ENSELUG00000010112	rnaseh1	100	52.013	ENSOGAG00000017176	RNASEH1	99	52.013	Otolemur_garnettii
ENSELUG00000010112	rnaseh1	98	44.586	ENSOARG00000005386	RNASEH1	98	44.586	Ovis_aries
ENSELUG00000010112	rnaseh1	90	55.109	ENSPPAG00000034221	RNASEH1	89	55.109	Pan_paniscus
ENSELUG00000010112	rnaseh1	97	50.338	ENSPPRG00000015513	RNASEH1	98	50.338	Panthera_pardus
ENSELUG00000010112	rnaseh1	84	52.964	ENSPTIG00000019034	RNASEH1	83	52.964	Panthera_tigris_altaica
ENSELUG00000010112	rnaseh1	83	48.438	ENSPTRG00000043403	-	91	48.438	Pan_troglodytes
ENSELUG00000010112	rnaseh1	90	55.109	ENSPTRG00000011614	RNASEH1	89	55.109	Pan_troglodytes
ENSELUG00000010112	rnaseh1	90	48.905	ENSPANG00000018246	-	89	48.905	Papio_anubis
ENSELUG00000010112	rnaseh1	90	54.982	ENSPANG00000000443	RNASEH1	97	54.510	Papio_anubis
ENSELUG00000010112	rnaseh1	92	58.803	ENSPKIG00000003146	rnaseh1	99	60.507	Paramormyrops_kingsleyae
ENSELUG00000010112	rnaseh1	91	52.899	ENSPSIG00000002937	RNASEH1	99	52.899	Pelodiscus_sinensis
ENSELUG00000010112	rnaseh1	100	62.500	ENSPMGG00000017463	rnaseh1	99	63.481	Periophthalmus_magnuspinnatus
ENSELUG00000010112	rnaseh1	95	49.333	ENSPEMG00000022465	-	92	52.297	Peromyscus_maniculatus_bairdii
ENSELUG00000010112	rnaseh1	53	36.875	ENSPCIG00000026047	-	90	36.875	Phascolarctos_cinereus
ENSELUG00000010112	rnaseh1	99	50.338	ENSPCIG00000023334	-	98	50.338	Phascolarctos_cinereus
ENSELUG00000010112	rnaseh1	99	65.333	ENSPFOG00000002841	rnaseh1	99	65.333	Poecilia_formosa
ENSELUG00000010112	rnaseh1	67	55.721	ENSPLAG00000021349	-	77	55.721	Poecilia_latipinna
ENSELUG00000010112	rnaseh1	99	65.333	ENSPMEG00000016826	rnaseh1	99	65.333	Poecilia_mexicana
ENSELUG00000010112	rnaseh1	99	63.844	ENSPREG00000012197	rnaseh1	99	63.844	Poecilia_reticulata
ENSELUG00000010112	rnaseh1	83	50.806	ENSPPYG00000008067	-	90	50.806	Pongo_abelii
ENSELUG00000010112	rnaseh1	90	45.387	ENSPPYG00000025873	RNASEH1	88	45.387	Pongo_abelii
ENSELUG00000010112	rnaseh1	90	52.593	ENSPCAG00000002500	RNASEH1	90	52.593	Procavia_capensis
ENSELUG00000010112	rnaseh1	99	47.651	ENSPCOG00000019444	RNASEH1	98	47.651	Propithecus_coquereli
ENSELUG00000010112	rnaseh1	100	50.000	ENSPVAG00000002070	RNASEH1	100	50.000	Pteropus_vampyrus
ENSELUG00000010112	rnaseh1	99	68.896	ENSPNYG00000001292	rnaseh1	96	69.565	Pundamilia_nyererei
ENSELUG00000010112	rnaseh1	99	65.320	ENSPNAG00000022344	rnaseh1	99	65.320	Pygocentrus_nattereri
ENSELUG00000010112	rnaseh1	98	51.701	ENSRNOG00000008584	Rnaseh1	96	51.701	Rattus_norvegicus
ENSELUG00000010112	rnaseh1	90	54.244	ENSRBIG00000034222	RNASEH1	88	54.244	Rhinopithecus_bieti
ENSELUG00000010112	rnaseh1	90	54.244	ENSRROG00000041761	RNASEH1	88	54.244	Rhinopithecus_roxellana
ENSELUG00000010112	rnaseh1	67	46.000	YMR234W	-	62	46.000	Saccharomyces_cerevisiae
ENSELUG00000010112	rnaseh1	90	53.846	ENSSBOG00000025411	RNASEH1	89	53.846	Saimiri_boliviensis_boliviensis
ENSELUG00000010112	rnaseh1	99	52.013	ENSSHAG00000013051	RNASEH1	97	52.013	Sarcophilus_harrisii
ENSELUG00000010112	rnaseh1	99	61.889	ENSSFOG00015002709	rnaseh1	99	61.093	Scleropages_formosus
ENSELUG00000010112	rnaseh1	99	70.667	ENSSMAG00000007586	rnaseh1	96	70.667	Scophthalmus_maximus
ENSELUG00000010112	rnaseh1	95	72.569	ENSSDUG00000008217	rnaseh1	95	74.368	Seriola_dumerili
ENSELUG00000010112	rnaseh1	90	71.429	ENSSLDG00000000442	rnaseh1	97	71.429	Seriola_lalandi_dorsalis
ENSELUG00000010112	rnaseh1	90	51.943	ENSSPUG00000006644	RNASEH1	92	51.943	Sphenodon_punctatus
ENSELUG00000010112	rnaseh1	99	69.900	ENSSPAG00000009353	rnaseh1	96	69.900	Stegastes_partitus
ENSELUG00000010112	rnaseh1	90	55.556	ENSSSCG00000025305	RNASEH1	90	55.556	Sus_scrofa
ENSELUG00000010112	rnaseh1	91	55.914	ENSTGUG00000012980	RNASEH1	93	55.714	Taeniopygia_guttata
ENSELUG00000010112	rnaseh1	98	65.541	ENSTRUG00000015774	rnaseh1	97	68.705	Takifugu_rubripes
ENSELUG00000010112	rnaseh1	92	72.727	ENSTNIG00000010715	rnaseh1	97	72.727	Tetraodon_nigroviridis
ENSELUG00000010112	rnaseh1	98	51.007	ENSTTRG00000001615	RNASEH1	98	51.007	Tursiops_truncatus
ENSELUG00000010112	rnaseh1	50	63.758	ENSUAMG00000018254	RNASEH1	77	63.758	Ursus_americanus
ENSELUG00000010112	rnaseh1	70	50.952	ENSUMAG00000003941	RNASEH1	65	50.952	Ursus_maritimus
ENSELUG00000010112	rnaseh1	98	44.898	ENSVPAG00000011589	RNASEH1	98	45.085	Vicugna_pacos
ENSELUG00000010112	rnaseh1	98	52.041	ENSVVUG00000008633	RNASEH1	88	52.041	Vulpes_vulpes
ENSELUG00000010112	rnaseh1	77	49.123	ENSXETG00000030371	-	99	49.123	Xenopus_tropicalis
ENSELUG00000010112	rnaseh1	99	50.502	ENSXETG00000001212	rnaseh1	99	52.632	Xenopus_tropicalis
ENSELUG00000010112	rnaseh1	99	65.667	ENSXMAG00000002357	rnaseh1	99	65.667	Xiphophorus_maculatus