EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000010160 (Gene tree)
Gene ID: 105018939
Gene Symbol: rpp38
Alias: fc10d08|wu:fc10d08|zgc:92924
Full Name: ribonuclease P/MRP subunit p38
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 897 bases
Position: chrLG20:27658543-27659439
Accession: 105018939
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000009603	Ribosomal_L7Ae	PF01248.26	6.6e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000003571	-	897	XM_010884759	ENSELUP00000009603	298 (aa)	XP_010883061	UPI0005769958

Gene Model

Click here to download ENSELUG00000010160's gene model file

Pathways

Pathway ID	Pathway Name	Source
els03008	Ribosome biogenesis in eukaryotes	KEGG
els03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000010160's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000010160	rpp38	94	44.056	ENSG00000152464	RPP38	88	47.712	Homo_sapiens
ENSELUG00000010160	rpp38	96	52.542	ENSAPOG00000001240	rpp38	95	52.542	Acanthochromis_polyacanthus
ENSELUG00000010160	rpp38	94	44.128	ENSAMEG00000018832	RPP38	88	44.322	Ailuropoda_melanoleuca
ENSELUG00000010160	rpp38	96	52.069	ENSACIG00000011592	rpp38	96	54.483	Amphilophus_citrinellus
ENSELUG00000010160	rpp38	96	53.401	ENSAOCG00000017293	rpp38	95	53.401	Amphiprion_ocellaris
ENSELUG00000010160	rpp38	96	52.921	ENSAPEG00000002315	rpp38	95	52.921	Amphiprion_percula
ENSELUG00000010160	rpp38	96	53.633	ENSATEG00000000731	rpp38	93	53.571	Anabas_testudineus
ENSELUG00000010160	rpp38	95	40.636	ENSAPLG00000002054	RPP38	93	41.053	Anas_platyrhynchos
ENSELUG00000010160	rpp38	96	54.671	ENSACLG00000016962	rpp38	95	55.363	Astatotilapia_calliptera
ENSELUG00000010160	rpp38	96	53.979	ENSACLG00000016958	rpp38	95	54.671	Astatotilapia_calliptera
ENSELUG00000010160	rpp38	97	42.268	ENSAMXG00000025023	rpp38	93	42.268	Astyanax_mexicanus
ENSELUG00000010160	rpp38	96	46.713	ENSBTAG00000007702	RPP38	89	47.273	Bos_taurus
ENSELUG00000010160	rpp38	94	43.310	ENSCAFG00000024373	RPP38	88	43.066	Canis_familiaris
ENSELUG00000010160	rpp38	94	43.310	ENSCAFG00020008008	RPP38	88	43.066	Canis_lupus_dingo
ENSELUG00000010160	rpp38	95	47.535	ENSCHIG00000012484	RPP38	88	47.445	Capra_hircus
ENSELUG00000010160	rpp38	95	43.493	ENSCPOG00000003981	RPP38	89	44.086	Cavia_porcellus
ENSELUG00000010160	rpp38	94	46.316	ENSCLAG00000010194	RPP38	88	45.818	Chinchilla_lanigera
ENSELUG00000010160	rpp38	90	42.435	ENSCSAG00000019055	RPP38	88	43.273	Chlorocebus_sabaeus
ENSELUG00000010160	rpp38	95	43.056	ENSCHOG00000004335	RPP38	89	42.446	Choloepus_hoffmanni
ENSELUG00000010160	rpp38	94	42.199	ENSCGRG00001001395	Rpp38	88	41.544	Cricetulus_griseus_chok1gshd
ENSELUG00000010160	rpp38	94	42.199	ENSCGRG00000017441	Rpp38	88	41.544	Cricetulus_griseus_crigri
ENSELUG00000010160	rpp38	96	51.903	ENSCSEG00000001721	rpp38	96	51.903	Cynoglossus_semilaevis
ENSELUG00000010160	rpp38	96	51.712	ENSCVAG00000001676	rpp38	95	53.793	Cyprinodon_variegatus
ENSELUG00000010160	rpp38	93	50.542	ENSDARG00000040350	rpp38	95	50.345	Danio_rerio
ENSELUG00000010160	rpp38	95	40.000	ENSDNOG00000040314	RPP38	89	40.794	Dasypus_novemcinctus
ENSELUG00000010160	rpp38	94	45.552	ENSDORG00000009783	Rpp38	87	45.018	Dipodomys_ordii
ENSELUG00000010160	rpp38	94	45.263	ENSETEG00000002839	RPP38	88	44.727	Echinops_telfairi
ENSELUG00000010160	rpp38	94	44.718	ENSEASG00005019783	RPP38	87	44.526	Equus_asinus_asinus
ENSELUG00000010160	rpp38	96	40.972	ENSEEUG00000014677	RPP38	89	41.606	Erinaceus_europaeus
ENSELUG00000010160	rpp38	94	48.070	ENSFCAG00000022449	RPP38	88	47.253	Felis_catus
ENSELUG00000010160	rpp38	92	41.135	ENSFALG00000014804	RPP38	89	41.549	Ficedula_albicollis
ENSELUG00000010160	rpp38	95	44.792	ENSFDAG00000018669	RPP38	89	44.245	Fukomys_damarensis
ENSELUG00000010160	rpp38	96	53.265	ENSFHEG00000013741	rpp38	95	55.254	Fundulus_heteroclitus
ENSELUG00000010160	rpp38	96	42.456	ENSGALG00000008794	RPP38	89	42.456	Gallus_gallus
ENSELUG00000010160	rpp38	56	58.929	ENSGACG00000009258	rpp38	99	58.929	Gasterosteus_aculeatus
ENSELUG00000010160	rpp38	96	53.979	ENSHBUG00000010937	rpp38	95	54.671	Haplochromis_burtoni
ENSELUG00000010160	rpp38	94	42.705	ENSHGLG00000012144	RPP38	88	42.066	Heterocephalus_glaber_female
ENSELUG00000010160	rpp38	97	43.599	ENSIPUG00000022879	rpp38	95	44.483	Ictalurus_punctatus
ENSELUG00000010160	rpp38	94	44.406	ENSSTOG00000025699	RPP38	86	44.203	Ictidomys_tridecemlineatus
ENSELUG00000010160	rpp38	95	43.509	ENSJJAG00000007523	Rpp38	89	42.909	Jaculus_jaculus
ENSELUG00000010160	rpp38	92	49.643	ENSKMAG00000003986	rpp38	89	50.357	Kryptolebias_marmoratus
ENSELUG00000010160	rpp38	99	53.947	ENSLBEG00000006853	rpp38	97	53.608	Labrus_bergylta
ENSELUG00000010160	rpp38	92	44.043	ENSLACG00000006502	RPP38	89	44.043	Latimeria_chalumnae
ENSELUG00000010160	rpp38	99	47.419	ENSLOCG00000018347	rpp38	94	48.986	Lepisosteus_oculatus
ENSELUG00000010160	rpp38	94	44.251	ENSLAFG00000000509	RPP38	88	43.682	Loxodonta_africana
ENSELUG00000010160	rpp38	90	42.066	ENSMMUG00000007679	RPP38	88	42.909	Macaca_mulatta
ENSELUG00000010160	rpp38	98	51.361	ENSMAMG00000012774	rpp38	95	51.034	Mastacembelus_armatus
ENSELUG00000010160	rpp38	96	54.671	ENSMZEG00005003189	rpp38	95	55.363	Maylandia_zebra
ENSELUG00000010160	rpp38	96	53.979	ENSMZEG00005003200	rpp38	95	54.671	Maylandia_zebra
ENSELUG00000010160	rpp38	96	42.807	ENSMGAG00000008217	RPP38	89	42.807	Meleagris_gallopavo
ENSELUG00000010160	rpp38	94	42.553	ENSMAUG00000003644	Rpp38	88	42.491	Mesocricetus_auratus
ENSELUG00000010160	rpp38	94	43.056	ENSMOCG00000007020	Rpp38	88	42.446	Microtus_ochrogaster
ENSELUG00000010160	rpp38	99	50.167	ENSMMOG00000003446	rpp38	95	50.000	Mola_mola
ENSELUG00000010160	rpp38	96	44.291	ENSMODG00000024091	RPP38	91	44.444	Monodelphis_domestica
ENSELUG00000010160	rpp38	96	49.164	ENSMALG00000002356	rpp38	93	49.310	Monopterus_albus
ENSELUG00000010160	rpp38	94	43.972	MGP_CAROLIEiJ_G0023133	Rpp38	88	43.382	Mus_caroli
ENSELUG00000010160	rpp38	94	43.262	ENSMUSG00000049950	Rpp38	88	42.647	Mus_musculus
ENSELUG00000010160	rpp38	94	43.617	MGP_PahariEiJ_G0019193	Rpp38	88	43.015	Mus_pahari
ENSELUG00000010160	rpp38	94	42.908	MGP_SPRETEiJ_G0024051	Rpp38	88	42.279	Mus_spretus
ENSELUG00000010160	rpp38	96	43.686	ENSMPUG00000018523	RPP38	88	45.126	Mustela_putorius_furo
ENSELUG00000010160	rpp38	90	42.857	ENSMLUG00000002153	RPP38	89	44.565	Myotis_lucifugus
ENSELUG00000010160	rpp38	94	46.127	ENSNGAG00000011066	Rpp38	88	45.620	Nannospalax_galili
ENSELUG00000010160	rpp38	96	52.759	ENSNBRG00000006994	rpp38	96	55.517	Neolamprologus_brichardi
ENSELUG00000010160	rpp38	96	54.138	ENSONIG00000020467	rpp38	94	54.828	Oreochromis_niloticus
ENSELUG00000010160	rpp38	89	41.418	ENSOCUG00000024367	-	87	42.963	Oryctolagus_cuniculus
ENSELUG00000010160	rpp38	89	41.392	ENSOCUG00000022768	-	87	42.963	Oryctolagus_cuniculus
ENSELUG00000010160	rpp38	97	50.859	ENSORLG00000009219	rpp38	95	51.890	Oryzias_latipes
ENSELUG00000010160	rpp38	97	52.397	ENSORLG00020011503	rpp38	92	53.242	Oryzias_latipes_hni
ENSELUG00000010160	rpp38	97	51.027	ENSORLG00015017702	rpp38	92	53.082	Oryzias_latipes_hsok
ENSELUG00000010160	rpp38	92	51.986	ENSOMEG00000005414	rpp38	95	53.082	Oryzias_melastigma
ENSELUG00000010160	rpp38	94	44.876	ENSOGAG00000008059	RPP38	88	44.689	Otolemur_garnettii
ENSELUG00000010160	rpp38	95	47.887	ENSOARG00000004534	RPP38	88	48.000	Ovis_aries
ENSELUG00000010160	rpp38	94	44.056	ENSPPAG00000041577	RPP38	80	43.478	Pan_paniscus
ENSELUG00000010160	rpp38	94	46.643	ENSPPRG00000015329	RPP38	88	46.520	Panthera_pardus
ENSELUG00000010160	rpp38	94	46.643	ENSPTIG00000007188	RPP38	88	46.520	Panthera_tigris_altaica
ENSELUG00000010160	rpp38	94	44.056	ENSPTRG00000002318	RPP38	80	43.478	Pan_troglodytes
ENSELUG00000010160	rpp38	95	47.902	ENSPKIG00000025652	rpp38	93	48.276	Paramormyrops_kingsleyae
ENSELUG00000010160	rpp38	96	38.908	ENSPSIG00000001527	RPP38	91	38.163	Pelodiscus_sinensis
ENSELUG00000010160	rpp38	94	41.637	ENSPEMG00000008375	Rpp38	88	42.279	Peromyscus_maniculatus_bairdii
ENSELUG00000010160	rpp38	99	44.482	ENSPCIG00000009096	RPP38	89	43.945	Phascolarctos_cinereus
ENSELUG00000010160	rpp38	67	53.465	ENSPFOG00000016823	rpp38	81	53.403	Poecilia_formosa
ENSELUG00000010160	rpp38	100	49.667	ENSPLAG00000007626	rpp38	96	51.211	Poecilia_latipinna
ENSELUG00000010160	rpp38	96	44.983	ENSPMEG00000020392	rpp38	96	46.713	Poecilia_mexicana
ENSELUG00000010160	rpp38	95	48.797	ENSPREG00000017744	rpp38	92	49.643	Poecilia_reticulata
ENSELUG00000010160	rpp38	94	44.056	ENSPPYG00000002113	RPP38	88	43.478	Pongo_abelii
ENSELUG00000010160	rpp38	90	42.336	ENSPVAG00000007155	RPP38	89	43.165	Pteropus_vampyrus
ENSELUG00000010160	rpp38	96	54.325	ENSPNYG00000004293	rpp38	95	55.017	Pundamilia_nyererei
ENSELUG00000010160	rpp38	92	42.909	ENSPNAG00000010633	rpp38	94	43.103	Pygocentrus_nattereri
ENSELUG00000010160	rpp38	94	46.809	ENSRNOG00000038025	Rpp38	88	46.520	Rattus_norvegicus
ENSELUG00000010160	rpp38	99	41.414	ENSSHAG00000015529	RPP38	94	42.509	Sarcophilus_harrisii
ENSELUG00000010160	rpp38	96	48.797	ENSSMAG00000018276	rpp38	91	48.582	Scophthalmus_maximus
ENSELUG00000010160	rpp38	96	52.595	ENSSDUG00000001651	rpp38	96	53.979	Seriola_dumerili
ENSELUG00000010160	rpp38	96	53.287	ENSSLDG00000014355	rpp38	96	53.979	Seriola_lalandi_dorsalis
ENSELUG00000010160	rpp38	94	39.146	ENSSARG00000012099	RPP38	86	38.376	Sorex_araneus
ENSELUG00000010160	rpp38	96	42.561	ENSSPUG00000018363	-	90	41.935	Sphenodon_punctatus
ENSELUG00000010160	rpp38	96	39.721	ENSSPUG00000008560	-	91	38.989	Sphenodon_punctatus
ENSELUG00000010160	rpp38	96	43.253	ENSSPUG00000005237	-	90	42.652	Sphenodon_punctatus
ENSELUG00000010160	rpp38	96	52.069	ENSSPAG00000020387	rpp38	95	51.724	Stegastes_partitus
ENSELUG00000010160	rpp38	95	42.361	ENSSSCG00000027110	RPP38	88	41.727	Sus_scrofa
ENSELUG00000010160	rpp38	92	43.416	ENSTGUG00000001366	RPP38	91	43.816	Taeniopygia_guttata
ENSELUG00000010160	rpp38	99	49.498	ENSTNIG00000001334	rpp38	96	50.173	Tetraodon_nigroviridis
ENSELUG00000010160	rpp38	96	47.241	ENSTTRG00000004420	RPP38	90	46.786	Tursiops_truncatus
ENSELUG00000010160	rpp38	96	43.206	ENSUAMG00000002618	RPP38	88	43.841	Ursus_americanus
ENSELUG00000010160	rpp38	96	42.953	ENSUMAG00000012382	RPP38	88	44.689	Ursus_maritimus
ENSELUG00000010160	rpp38	94	43.662	ENSVVUG00000005272	RPP38	88	43.728	Vulpes_vulpes
ENSELUG00000010160	rpp38	93	37.770	ENSXETG00000003419	rpp38	92	37.770	Xenopus_tropicalis