EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSELUG00000010247 (Gene tree)
Gene ID
105013184
Gene Symbol
smarca4a
Alias
brahma-related gene 1|brg1|smarca2|smarca4|wu:fb51a08|yng|young
Full Name
SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 4
Gene Type
protein_coding
Species
Esox_lucius
Status
putative
Strand
Plus strand
Length
19154 bases
Position
chrLG11:18660444-18679597
Accession
105013184
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSELUP00000009606ResIIIPF04851.151e-0811
ENSELUP00000009645ResIIIPF04851.151.1e-0811
ENSELUP00000009606BRKPF07533.165.1e-1611
ENSELUP00000009645BRKPF07533.165.4e-1611
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSELUT00000003495-8153XM_010874532ENSELUP000000096451636 (aa)XP_010872834UPI0005775D6D
ENSELUT00000003561-4734-ENSELUP000000096061577 (aa)--
Gene Model
Click here to download ENSELUG00000010247's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000010247's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSELUG00000010247smarca4a9373.484ENSELUG00000010318smarca29772.131
ENSELUG00000010247smarca4a9981.182ENSELUG00000023232-9981.428
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSELUG00000010247smarca4a10084.643ENSG00000127616SMARCA49795.000Homo_sapiens
ENSELUG00000010247smarca4a9583.863ENSAPOG00000004542SMARCA49987.127Acanthochromis_polyacanthus
ENSELUG00000010247smarca4a7789.666ENSAPOG00000003509smarca4a9888.133Acanthochromis_polyacanthus
ENSELUG00000010247smarca4a10082.090ENSAMEG00000010868SMARCA410083.911Ailuropoda_melanoleuca
ENSELUG00000010247smarca4a9486.087ENSACIG00000003035-9787.000Amphilophus_citrinellus
ENSELUG00000010247smarca4a9790.025ENSACIG00000021550smarca4a9890.708Amphilophus_citrinellus
ENSELUG00000010247smarca4a8791.241ENSAOCG00000019167smarca4a10091.477Amphiprion_ocellaris
ENSELUG00000010247smarca4a9483.915ENSAOCG00000009450-9785.507Amphiprion_ocellaris
ENSELUG00000010247smarca4a10083.304ENSAPEG00000023108-9885.035Amphiprion_percula
ENSELUG00000010247smarca4a8791.387ENSAPEG00000015559smarca4a10091.619Amphiprion_percula
ENSELUG00000010247smarca4a10089.691ENSATEG00000011524smarca4a10090.479Anabas_testudineus
ENSELUG00000010247smarca4a9983.564ENSATEG00000001094-9983.772Anabas_testudineus
ENSELUG00000010247smarca4a9986.200ENSANAG00000036991SMARCA410083.998Aotus_nancymaae
ENSELUG00000010247smarca4a9789.250ENSACLG00000000163smarca4a9990.262Astatotilapia_calliptera
ENSELUG00000010247smarca4a9485.762ENSACLG00000008638-9886.342Astatotilapia_calliptera
ENSELUG00000010247smarca4a9487.370ENSAMXG00000011238-9987.482Astyanax_mexicanus
ENSELUG00000010247smarca4a9789.498ENSAMXG00000021023smarca4a9890.026Astyanax_mexicanus
ENSELUG00000010247smarca4a10085.176ENSBTAG00000019220SMARCA410086.756Bos_taurus
ENSELUG00000010247smarca4a9786.377ENSCJAG00000005936SMARCA410083.998Callithrix_jacchus
ENSELUG00000010247smarca4a10084.643ENSCAFG00000017584SMARCA410086.457Canis_familiaris
ENSELUG00000010247smarca4a9886.196ENSCAFG00020024620SMARCA49986.457Canis_lupus_dingo
ENSELUG00000010247smarca4a10081.846ENSCHIG00000015318SMARCA410083.242Capra_hircus
ENSELUG00000010247smarca4a10084.569ENSTSYG00000012966SMARCA410086.634Carlito_syrichta
ENSELUG00000010247smarca4a9383.379ENSCAPG00000015932SMARCA49488.185Cavia_aperea
ENSELUG00000010247smarca4a10084.462ENSCPOG00000015549SMARCA410085.749Cavia_porcellus
ENSELUG00000010247smarca4a10080.551ENSCCAG00000031660SMARCA49983.584Cebus_capucinus
ENSELUG00000010247smarca4a10084.643ENSCATG00000029530SMARCA410086.578Cercocebus_atys
ENSELUG00000010247smarca4a9886.894ENSCLAG00000011946SMARCA410086.817Chinchilla_lanigera
ENSELUG00000010247smarca4a10085.239ENSCPBG00000009994SMARCA410086.328Chrysemys_picta_bellii
ENSELUG00000010247smarca4a10084.704ENSCANG00000036013SMARCA410086.638Colobus_angolensis_palliatus
ENSELUG00000010247smarca4a10084.583ENSCGRG00001016732Smarca410086.397Cricetulus_griseus_chok1gshd
ENSELUG00000010247smarca4a10084.583ENSCGRG00000017242Smarca410086.397Cricetulus_griseus_crigri
ENSELUG00000010247smarca4a9788.631ENSCSEG00000014771smarca4a10089.152Cynoglossus_semilaevis
ENSELUG00000010247smarca4a9980.677ENSCVAG00000003018-9882.729Cyprinodon_variegatus
ENSELUG00000010247smarca4a9788.481ENSCVAG00000006979smarca4a9989.183Cyprinodon_variegatus
ENSELUG00000010247smarca4a9283.487ENSDARG00000104339SMARCA49584.076Danio_rerio
ENSELUG00000010247smarca4a10089.333ENSDARG00000077226smarca4a10090.000Danio_rerio
ENSELUG00000010247smarca4a9983.524ENSDNOG00000048847SMARCA410080.150Dasypus_novemcinctus
ENSELUG00000010247smarca4a8381.131ENSDORG00000002544Smarca49579.014Dipodomys_ordii
ENSELUG00000010247smarca4a9475.303ENSETEG00000013361SMARCA49476.835Echinops_telfairi
ENSELUG00000010247smarca4a9986.392ENSEASG00005006167SMARCA49986.565Equus_asinus_asinus
ENSELUG00000010247smarca4a10084.764ENSECAG00000008334SMARCA410086.638Equus_caballus
ENSELUG00000010247smarca4a10084.430ENSFCAG00000004894SMARCA410086.405Felis_catus
ENSELUG00000010247smarca4a9183.254ENSFALG00000004208SMARCA49581.725Ficedula_albicollis
ENSELUG00000010247smarca4a9185.801ENSFDAG00000012237SMARCA49786.205Fukomys_damarensis
ENSELUG00000010247smarca4a10083.194ENSFHEG00000007902-9883.250Fundulus_heteroclitus
ENSELUG00000010247smarca4a9787.671ENSFHEG00000010182smarca4a10088.161Fundulus_heteroclitus
ENSELUG00000010247smarca4a8889.180ENSGMOG00000002649smarca4a9489.286Gadus_morhua
ENSELUG00000010247smarca4a9080.667ENSGMOG00000005756-9380.565Gadus_morhua
ENSELUG00000010247smarca4a7384.942ENSGALG00000047145SMARCA410086.606Gallus_gallus
ENSELUG00000010247smarca4a9089.099ENSGAFG00000014900smarca4a9990.014Gambusia_affinis
ENSELUG00000010247smarca4a9882.606ENSGAFG00000008827-9883.696Gambusia_affinis
ENSELUG00000010247smarca4a10088.296ENSGACG00000006691smarca4a10088.781Gasterosteus_aculeatus
ENSELUG00000010247smarca4a9978.520ENSGACG00000016033-9979.461Gasterosteus_aculeatus
ENSELUG00000010247smarca4a10085.455ENSGAGG00000016757SMARCA410086.545Gopherus_agassizii
ENSELUG00000010247smarca4a10084.643ENSGGOG00000009882SMARCA410086.578Gorilla_gorilla
ENSELUG00000010247smarca4a10082.399ENSHBUG00000005447-9886.676Haplochromis_burtoni
ENSELUG00000010247smarca4a10090.959ENSHBUG00000021172smarca4a10091.019Haplochromis_burtoni
ENSELUG00000010247smarca4a10085.491ENSHGLG00000010519SMARCA410086.033Heterocephalus_glaber_female
ENSELUG00000010247smarca4a10085.628ENSHGLG00100013774SMARCA410085.568Heterocephalus_glaber_male
ENSELUG00000010247smarca4a9389.092ENSHCOG00000009510smarca4a9690.758Hippocampus_comes
ENSELUG00000010247smarca4a10089.037ENSIPUG00000006107smarca4a10089.461Ictalurus_punctatus
ENSELUG00000010247smarca4a9884.577ENSIPUG00000016346-9984.128Ictalurus_punctatus
ENSELUG00000010247smarca4a10084.462ENSSTOG00000007939SMARCA410086.276Ictidomys_tridecemlineatus
ENSELUG00000010247smarca4a10083.572ENSJJAG00000012877Smarca410085.407Jaculus_jaculus
ENSELUG00000010247smarca4a10087.971ENSKMAG00000011931smarca4a10089.138Kryptolebias_marmoratus
ENSELUG00000010247smarca4a10082.255ENSKMAG00000019518-9885.150Kryptolebias_marmoratus
ENSELUG00000010247smarca4a9873.776ENSLBEG00000020655-9874.856Labrus_bergylta
ENSELUG00000010247smarca4a9387.435ENSLBEG00000017383smarca4a9787.877Labrus_bergylta
ENSELUG00000010247smarca4a5282.471ENSLACG00000015309SMARCA410082.588Latimeria_chalumnae
ENSELUG00000010247smarca4a10085.471ENSLOCG00000007820smarca4a9986.020Lepisosteus_oculatus
ENSELUG00000010247smarca4a9985.554ENSLAFG00000001433SMARCA410086.301Loxodonta_africana
ENSELUG00000010247smarca4a9886.196ENSMFAG00000032146SMARCA49986.578Macaca_fascicularis
ENSELUG00000010247smarca4a9986.254ENSMMUG00000012042SMARCA410086.578Macaca_mulatta
ENSELUG00000010247smarca4a10084.625ENSMNEG00000028512SMARCA410086.562Macaca_nemestrina
ENSELUG00000010247smarca4a10084.490ENSMLEG00000034976SMARCA410086.421Mandrillus_leucophaeus
ENSELUG00000010247smarca4a10089.617ENSMAMG00000009256smarca4a10090.407Mastacembelus_armatus
ENSELUG00000010247smarca4a9982.861ENSMAMG00000002841-9885.519Mastacembelus_armatus
ENSELUG00000010247smarca4a9582.999ENSMZEG00005023861-9883.667Maylandia_zebra
ENSELUG00000010247smarca4a10089.933ENSMZEG00005003889smarca4a10090.358Maylandia_zebra
ENSELUG00000010247smarca4a10084.430ENSMAUG00000020731Smarca410086.119Mesocricetus_auratus
ENSELUG00000010247smarca4a10084.490ENSMICG00000009806SMARCA410086.301Microcebus_murinus
ENSELUG00000010247smarca4a10084.369ENSMOCG00000022209Smarca410086.301Microtus_ochrogaster
ENSELUG00000010247smarca4a9587.859ENSMMOG00000007571smarca4a9888.705Mola_mola
ENSELUG00000010247smarca4a9983.643ENSMMOG00000008466-9883.869Mola_mola
ENSELUG00000010247smarca4a10084.579ENSMODG00000006287SMARCA410085.996Monodelphis_domestica
ENSELUG00000010247smarca4a8985.064ENSMALG00000021534-9985.593Monopterus_albus
ENSELUG00000010247smarca4a9789.378ENSMALG00000003388smarca4a10089.509Monopterus_albus
ENSELUG00000010247smarca4a10084.643MGP_CAROLIEiJ_G0031879Smarca410086.457Mus_caroli
ENSELUG00000010247smarca4a10084.643ENSMUSG00000032187Smarca410086.457Mus_musculus
ENSELUG00000010247smarca4a10085.012MGP_PahariEiJ_G0014745Smarca410086.830Mus_pahari
ENSELUG00000010247smarca4a10084.643MGP_SPRETEiJ_G0033003Smarca410086.457Mus_spretus
ENSELUG00000010247smarca4a10084.583ENSMPUG00000005711SMARCA410086.397Mustela_putorius_furo
ENSELUG00000010247smarca4a10084.825ENSMLUG00000004491-10086.683Myotis_lucifugus
ENSELUG00000010247smarca4a10084.727ENSNGAG00000021852Smarca410086.303Nannospalax_galili
ENSELUG00000010247smarca4a9491.249ENSNBRG00000011457smarca4a9691.594Neolamprologus_brichardi
ENSELUG00000010247smarca4a8985.633ENSNBRG00000018865-9986.506Neolamprologus_brichardi
ENSELUG00000010247smarca4a9583.355ENSNLEG00000012389SMARCA49483.951Nomascus_leucogenys
ENSELUG00000010247smarca4a8186.207ENSOPRG00000000885-7886.207Ochotona_princeps
ENSELUG00000010247smarca4a10084.709ENSODEG00000017127SMARCA410084.882Octodon_degus
ENSELUG00000010247smarca4a10082.598ENSONIG00000018040-10083.075Oreochromis_niloticus
ENSELUG00000010247smarca4a10090.049ENSONIG00000008196smarca4a10090.655Oreochromis_niloticus
ENSELUG00000010247smarca4a9780.865ENSOCUG00000001787SMARCA49880.997Oryctolagus_cuniculus
ENSELUG00000010247smarca4a9788.413ENSORLG00000015452smarca4a10089.078Oryzias_latipes
ENSELUG00000010247smarca4a9583.032ENSORLG00000003955-9982.952Oryzias_latipes
ENSELUG00000010247smarca4a9583.105ENSORLG00020009728-9982.842Oryzias_latipes_hni
ENSELUG00000010247smarca4a9788.098ENSORLG00020004611smarca4a10089.078Oryzias_latipes_hni
ENSELUG00000010247smarca4a9788.098ENSORLG00015016560smarca4a10089.078Oryzias_latipes_hsok
ENSELUG00000010247smarca4a9982.459ENSORLG00015007739-9982.761Oryzias_latipes_hsok
ENSELUG00000010247smarca4a10088.375ENSOMEG00000007486smarca4a10089.362Oryzias_melastigma
ENSELUG00000010247smarca4a9582.671ENSOMEG00000016626-9982.562Oryzias_melastigma
ENSELUG00000010247smarca4a8984.573ENSOGAG00000016148SMARCA410084.750Otolemur_garnettii
ENSELUG00000010247smarca4a9885.252ENSOARG00000017454SMARCA410086.444Ovis_aries
ENSELUG00000010247smarca4a10084.643ENSPPAG00000043191SMARCA410086.578Pan_paniscus
ENSELUG00000010247smarca4a10084.430ENSPPRG00000000064SMARCA410086.405Panthera_pardus
ENSELUG00000010247smarca4a8085.564ENSPTIG00000017447SMARCA410081.726Panthera_tigris_altaica
ENSELUG00000010247smarca4a10084.643ENSPTRG00000010488SMARCA410086.578Pan_troglodytes
ENSELUG00000010247smarca4a9886.304ENSPANG00000011042SMARCA49986.683Papio_anubis
ENSELUG00000010247smarca4a9788.972ENSPKIG00000007770SMARCA410089.569Paramormyrops_kingsleyae
ENSELUG00000010247smarca4a10085.549ENSPKIG00000010087-10086.760Paramormyrops_kingsleyae
ENSELUG00000010247smarca4a10081.579ENSPSIG00000005547SMARCA410082.424Pelodiscus_sinensis
ENSELUG00000010247smarca4a10084.490ENSPEMG00000020389Smarca410086.301Peromyscus_maniculatus_bairdii
ENSELUG00000010247smarca4a10085.048ENSPCIG00000017138SMARCA410086.848Phascolarctos_cinereus
ENSELUG00000010247smarca4a10082.409ENSPFOG00000012930-9983.026Poecilia_formosa
ENSELUG00000010247smarca4a10086.763ENSPFOG00000007892smarca4a10088.147Poecilia_formosa
ENSELUG00000010247smarca4a8688.700ENSPLAG00000018616-9984.805Poecilia_latipinna
ENSELUG00000010247smarca4a10086.883ENSPLAG00000014294smarca4a10088.267Poecilia_latipinna
ENSELUG00000010247smarca4a9985.272ENSPMEG00000003725smarca4a9788.615Poecilia_mexicana
ENSELUG00000010247smarca4a9984.795ENSPMEG00000008929-9985.894Poecilia_mexicana
ENSELUG00000010247smarca4a10086.563ENSPREG00000014608smarca4a10087.582Poecilia_reticulata
ENSELUG00000010247smarca4a9981.686ENSPREG00000014823-9982.859Poecilia_reticulata
ENSELUG00000010247smarca4a10083.692ENSPPYG00000009568SMARCA410085.347Pongo_abelii
ENSELUG00000010247smarca4a7886.755ENSPCAG00000014054SMARCA47592.248Procavia_capensis
ENSELUG00000010247smarca4a10084.430ENSPCOG00000023011SMARCA410086.421Propithecus_coquereli
ENSELUG00000010247smarca4a9480.488ENSPVAG00000007787SMARCA49683.818Pteropus_vampyrus
ENSELUG00000010247smarca4a9791.123ENSPNYG00000000717smarca4a9691.443Pundamilia_nyererei
ENSELUG00000010247smarca4a9485.428ENSPNYG00000023995-9886.667Pundamilia_nyererei
ENSELUG00000010247smarca4a9586.253ENSPNAG00000006636-9786.654Pygocentrus_nattereri
ENSELUG00000010247smarca4a9887.516ENSPNAG00000024136smarca4a9887.836Pygocentrus_nattereri
ENSELUG00000010247smarca4a10084.643ENSRNOG00000009271Smarca410086.457Rattus_norvegicus
ENSELUG00000010247smarca4a9886.196ENSRBIG00000038696SMARCA49986.518Rhinopithecus_bieti
ENSELUG00000010247smarca4a10084.583ENSRROG00000045509SMARCA410086.518Rhinopithecus_roxellana
ENSELUG00000010247smarca4a9986.369ENSSBOG00000026896SMARCA49986.867Saimiri_boliviensis_boliviensis
ENSELUG00000010247smarca4a10085.048ENSSHAG00000001642SMARCA410087.091Sarcophilus_harrisii
ENSELUG00000010247smarca4a10089.630ENSSFOG00015013823smarca410089.994Scleropages_formosus
ENSELUG00000010247smarca4a9684.567ENSSFOG00015009921-9391.629Scleropages_formosus
ENSELUG00000010247smarca4a9982.061ENSSMAG00000014082-9982.164Scophthalmus_maximus
ENSELUG00000010247smarca4a9890.458ENSSMAG00000003200smarca4a10090.315Scophthalmus_maximus
ENSELUG00000010247smarca4a10085.463ENSSDUG00000017298smarca4a10086.155Seriola_dumerili
ENSELUG00000010247smarca4a9983.902ENSSDUG00000005388-9884.122Seriola_dumerili
ENSELUG00000010247smarca4a9584.167ENSSLDG00000023663-9786.207Seriola_lalandi_dorsalis
ENSELUG00000010247smarca4a10091.212ENSSLDG00000024486smarca4a10092.357Seriola_lalandi_dorsalis
ENSELUG00000010247smarca4a6495.031ENSSARG00000013477SMARCA48295.031Sorex_araneus
ENSELUG00000010247smarca4a9583.291ENSSPUG00000004558SMARCA49884.204Sphenodon_punctatus
ENSELUG00000010247smarca4a10090.727ENSSPAG00000004248smarca4a10091.091Stegastes_partitus
ENSELUG00000010247smarca4a10082.238ENSSPAG00000012533-9982.999Stegastes_partitus
ENSELUG00000010247smarca4a10084.852ENSSSCG00000013629SMARCA410086.421Sus_scrofa
ENSELUG00000010247smarca4a5383.392ENSTGUG00000015488-9982.807Taeniopygia_guttata
ENSELUG00000010247smarca4a9580.824ENSTRUG00000001378SMARCA49882.778Takifugu_rubripes
ENSELUG00000010247smarca4a8985.084ENSTRUG00000004885smarca4a10084.840Takifugu_rubripes
ENSELUG00000010247smarca4a7288.542ENSTNIG00000004859-10088.542Tetraodon_nigroviridis
ENSELUG00000010247smarca4a10080.762ENSTNIG00000004536SMARCA410081.490Tetraodon_nigroviridis
ENSELUG00000010247smarca4a10083.134ENSTTRG00000009519SMARCA410084.211Tursiops_truncatus
ENSELUG00000010247smarca4a10084.583ENSUAMG00000014661SMARCA410086.397Ursus_americanus
ENSELUG00000010247smarca4a9589.226ENSUMAG00000022005SMARCA49889.521Ursus_maritimus
ENSELUG00000010247smarca4a9886.196ENSVVUG00000017820SMARCA49786.457Vulpes_vulpes
ENSELUG00000010247smarca4a10082.036ENSXETG00000009355smarca410082.512Xenopus_tropicalis
ENSELUG00000010247smarca4a9884.749ENSXCOG00000013494-9885.466Xiphophorus_couchianus
ENSELUG00000010247smarca4a9884.813ENSXMAG00000007030-9885.678Xiphophorus_maculatus
ENSELUG00000010247smarca4a10087.319ENSXMAG00000006321smarca4a10089.485Xiphophorus_maculatus

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