EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000010318 (Gene tree)
Gene ID: 105027427
Gene Symbol: smarca2
Alias: wu:fa56c07|wu:fi27f11|zgc:66238
Full Name: probable global transcription activator SNF2L2
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 64016 bases
Position: chrLG13:35900222-35964237
Accession: 105027427
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000032324	ResIII	PF04851.15	2.7e-07	1	1
ENSELUP00000009712	ResIII	PF04851.15	3e-07	1	1
ENSELUP00000032324	BRK	PF07533.16	3.9e-17	1	1
ENSELUP00000009601	BRK	PF07533.16	4e-17	1	1
ENSELUP00000032338	BRK	PF07533.16	4.2e-17	1	1
ENSELUP00000009712	BRK	PF07533.16	4.3e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000003389	-	4891	-	ENSELUP00000009712	1577 (aa)	-	-
ENSELUT00000003570	-	4473	-	ENSELUP00000009601	1490 (aa)	-	-
ENSELUT00000003464	-	4816	-	ENSELUP00000032338	1552 (aa)	-	-
ENSELUT00000003510	-	4626	XM_020052629	ENSELUP00000032324	1488 (aa)	XP_019908188	-

Gene Model

Click here to download ENSELUG00000010318's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000010318's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000010318	smarca2	97	72.131	ENSELUG00000010247	smarca4a	93	73.484
ENSELUG00000010318	smarca2	93	69.647	ENSELUG00000023232	-	91	70.469

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000010318	smarca2	96	79.236	ENSG00000080503	SMARCA2	99	98.000	Homo_sapiens
ENSELUG00000010318	smarca2	99	83.108	ENSAPOG00000002641	SMARCA2	100	83.892	Acanthochromis_polyacanthus
ENSELUG00000010318	smarca2	95	76.763	ENSAMEG00000012325	SMARCA2	94	86.462	Ailuropoda_melanoleuca
ENSELUG00000010318	smarca2	99	80.757	ENSACIG00000015607	SMARCA2	96	81.510	Amphilophus_citrinellus
ENSELUG00000010318	smarca2	99	82.440	ENSAOCG00000009647	-	95	83.716	Amphiprion_ocellaris
ENSELUG00000010318	smarca2	99	82.349	ENSAPEG00000007646	SMARCA2	99	83.780	Amphiprion_percula
ENSELUG00000010318	smarca2	99	82.432	ENSATEG00000006916	SMARCA2	94	84.110	Anabas_testudineus
ENSELUG00000010318	smarca2	94	76.327	ENSAPLG00000013873	SMARCA2	92	76.977	Anas_platyrhynchos
ENSELUG00000010318	smarca2	95	79.464	ENSACAG00000002423	SMARCA2	92	80.816	Anolis_carolinensis
ENSELUG00000010318	smarca2	96	79.097	ENSANAG00000026498	SMARCA2	96	78.940	Aotus_nancymaae
ENSELUG00000010318	smarca2	99	81.481	ENSACLG00000004248	SMARCA2	95	83.784	Astatotilapia_calliptera
ENSELUG00000010318	smarca2	99	82.140	ENSAMXG00000012404	smarca2	93	84.828	Astyanax_mexicanus
ENSELUG00000010318	smarca2	96	79.167	ENSBTAG00000007494	SMARCA2	92	80.969	Bos_taurus
ENSELUG00000010318	smarca2	96	79.236	ENSCJAG00000010710	SMARCA2	96	80.405	Callithrix_jacchus
ENSELUG00000010318	smarca2	96	79.528	ENSCAFG00000002013	SMARCA2	92	81.144	Canis_familiaris
ENSELUG00000010318	smarca2	76	86.174	ENSCAFG00020026802	SMARCA2	94	85.801	Canis_lupus_dingo
ENSELUG00000010318	smarca2	96	79.167	ENSCHIG00000025863	SMARCA2	92	81.038	Capra_hircus
ENSELUG00000010318	smarca2	96	75.972	ENSTSYG00000003858	SMARCA2	93	79.294	Carlito_syrichta
ENSELUG00000010318	smarca2	96	76.817	ENSCAPG00000002890	SMARCA2	93	79.473	Cavia_aperea
ENSELUG00000010318	smarca2	96	78.893	ENSCPOG00000005475	SMARCA2	92	81.127	Cavia_porcellus
ENSELUG00000010318	smarca2	96	79.306	ENSCCAG00000030636	SMARCA2	96	79.667	Cebus_capucinus
ENSELUG00000010318	smarca2	96	78.483	ENSCATG00000031470	SMARCA2	97	79.375	Cercocebus_atys
ENSELUG00000010318	smarca2	96	78.999	ENSCLAG00000014484	SMARCA2	92	80.923	Chinchilla_lanigera
ENSELUG00000010318	smarca2	96	79.306	ENSCSAG00000008650	SMARCA2	97	80.920	Chlorocebus_sabaeus
ENSELUG00000010318	smarca2	87	80.348	ENSCHOG00000004316	SMARCA2	84	80.326	Choloepus_hoffmanni
ENSELUG00000010318	smarca2	96	79.860	ENSCPBG00000025463	SMARCA2	92	81.658	Chrysemys_picta_bellii
ENSELUG00000010318	smarca2	96	79.375	ENSCANG00000039597	SMARCA2	96	80.403	Colobus_angolensis_palliatus
ENSELUG00000010318	smarca2	77	81.355	ENSCGRG00001002323	Smarca2	92	74.830	Cricetulus_griseus_chok1gshd
ENSELUG00000010318	smarca2	96	80.432	ENSCSEG00000019311	SMARCA2	95	80.785	Cynoglossus_semilaevis
ENSELUG00000010318	smarca2	91	77.938	ENSCVAG00000016571	SMARCA2	98	78.566	Cyprinodon_variegatus
ENSELUG00000010318	smarca2	99	82.167	ENSDARG00000008904	smarca2	93	84.600	Danio_rerio
ENSELUG00000010318	smarca2	96	78.897	ENSDNOG00000006402	SMARCA2	92	80.785	Dasypus_novemcinctus
ENSELUG00000010318	smarca2	96	78.874	ENSDORG00000014832	Smarca2	93	79.559	Dipodomys_ordii
ENSELUG00000010318	smarca2	81	61.188	FBgn0000212	brm	86	54.161	Drosophila_melanogaster
ENSELUG00000010318	smarca2	87	61.283	ENSEBUG00000002449	-	94	62.619	Eptatretus_burgeri
ENSELUG00000010318	smarca2	95	70.625	ENSEBUG00000011442	-	96	69.494	Eptatretus_burgeri
ENSELUG00000010318	smarca2	96	79.389	ENSEASG00005010312	SMARCA2	92	81.076	Equus_asinus_asinus
ENSELUG00000010318	smarca2	62	88.235	ENSEEUG00000015540	-	64	92.308	Erinaceus_europaeus
ENSELUG00000010318	smarca2	96	79.528	ENSFCAG00000001568	SMARCA2	92	80.939	Felis_catus
ENSELUG00000010318	smarca2	95	80.367	ENSFALG00000010416	SMARCA2	94	82.749	Ficedula_albicollis
ENSELUG00000010318	smarca2	96	76.091	ENSFDAG00000010502	SMARCA2	92	79.489	Fukomys_damarensis
ENSELUG00000010318	smarca2	99	81.097	ENSFHEG00000021250	SMARCA2	95	82.529	Fundulus_heteroclitus
ENSELUG00000010318	smarca2	99	78.476	ENSGMOG00000014229	SMARCA2	93	81.216	Gadus_morhua
ENSELUG00000010318	smarca2	95	80.663	ENSGALG00000010164	SMARCA2	92	82.041	Gallus_gallus
ENSELUG00000010318	smarca2	99	74.430	ENSGAFG00000001164	SMARCA2	95	76.637	Gambusia_affinis
ENSELUG00000010318	smarca2	99	81.538	ENSGACG00000014488	SMARCA2	96	82.731	Gasterosteus_aculeatus
ENSELUG00000010318	smarca2	96	79.790	ENSGAGG00000024412	SMARCA2	92	81.590	Gopherus_agassizii
ENSELUG00000010318	smarca2	85	87.837	ENSGGOG00000000513	SMARCA2	91	86.074	Gorilla_gorilla
ENSELUG00000010318	smarca2	99	82.195	ENSHBUG00000006691	SMARCA2	95	83.968	Haplochromis_burtoni
ENSELUG00000010318	smarca2	93	78.994	ENSHGLG00000005215	SMARCA2	92	79.033	Heterocephalus_glaber_female
ENSELUG00000010318	smarca2	96	79.152	ENSHGLG00100010496	SMARCA2	92	81.228	Heterocephalus_glaber_male
ENSELUG00000010318	smarca2	85	85.125	ENSHCOG00000015348	-	88	89.676	Hippocampus_comes
ENSELUG00000010318	smarca2	99	80.682	ENSIPUG00000011060	smarca2	94	83.625	Ictalurus_punctatus
ENSELUG00000010318	smarca2	96	79.071	ENSSTOG00000006812	SMARCA2	93	80.733	Ictidomys_tridecemlineatus
ENSELUG00000010318	smarca2	96	78.670	ENSJJAG00000010867	Smarca2	92	80.582	Jaculus_jaculus
ENSELUG00000010318	smarca2	99	80.848	ENSKMAG00000015844	-	95	82.368	Kryptolebias_marmoratus
ENSELUG00000010318	smarca2	51	68.222	ENSLACG00000000270	SMARCA2	94	67.402	Latimeria_chalumnae
ENSELUG00000010318	smarca2	95	81.843	ENSLOCG00000011499	smarca2	93	83.555	Lepisosteus_oculatus
ENSELUG00000010318	smarca2	96	77.755	ENSLAFG00000014061	SMARCA2	92	80.554	Loxodonta_africana
ENSELUG00000010318	smarca2	93	80.670	ENSMFAG00000003814	SMARCA2	95	79.466	Macaca_fascicularis
ENSELUG00000010318	smarca2	96	79.306	ENSMMUG00000015279	SMARCA2	92	81.373	Macaca_mulatta
ENSELUG00000010318	smarca2	96	78.641	ENSMNEG00000041069	SMARCA2	97	79.856	Macaca_nemestrina
ENSELUG00000010318	smarca2	88	87.062	ENSMLEG00000027418	SMARCA2	97	79.583	Mandrillus_leucophaeus
ENSELUG00000010318	smarca2	99	81.788	ENSMAMG00000003056	SMARCA2	100	82.120	Mastacembelus_armatus
ENSELUG00000010318	smarca2	99	82.294	ENSMZEG00005020709	SMARCA2	95	83.882	Maylandia_zebra
ENSELUG00000010318	smarca2	79	65.987	ENSMGAG00000005160	-	97	68.248	Meleagris_gallopavo
ENSELUG00000010318	smarca2	96	79.444	ENSMICG00000005162	SMARCA2	97	78.694	Microcebus_murinus
ENSELUG00000010318	smarca2	96	78.973	ENSMOCG00000001611	Smarca2	92	80.801	Microtus_ochrogaster
ENSELUG00000010318	smarca2	99	80.161	ENSMMOG00000014196	SMARCA2	96	82.879	Mola_mola
ENSELUG00000010318	smarca2	95	80.579	ENSMODG00000003578	SMARCA2	92	81.905	Monodelphis_domestica
ENSELUG00000010318	smarca2	96	83.662	ENSMALG00000009611	SMARCA2	95	83.299	Monopterus_albus
ENSELUG00000010318	smarca2	94	78.185	MGP_CAROLIEiJ_G0022841	Smarca2	93	78.818	Mus_caroli
ENSELUG00000010318	smarca2	93	79.104	ENSMUSG00000024921	Smarca2	99	98.000	Mus_musculus
ENSELUG00000010318	smarca2	96	79.155	MGP_PahariEiJ_G0014334	Smarca2	92	80.432	Mus_pahari
ENSELUG00000010318	smarca2	93	78.983	MGP_SPRETEiJ_G0023759	Smarca2	89	89.737	Mus_spretus
ENSELUG00000010318	smarca2	77	86.589	ENSMPUG00000005171	SMARCA2	88	86.341	Mustela_putorius_furo
ENSELUG00000010318	smarca2	96	74.627	ENSMLUG00000002342	SMARCA2	93	76.640	Myotis_lucifugus
ENSELUG00000010318	smarca2	96	77.984	ENSNGAG00000000108	Smarca2	92	79.570	Nannospalax_galili
ENSELUG00000010318	smarca2	88	78.919	ENSNBRG00000017998	SMARCA2	94	82.587	Neolamprologus_brichardi
ENSELUG00000010318	smarca2	93	79.790	ENSNLEG00000008575	SMARCA2	95	78.853	Nomascus_leucogenys
ENSELUG00000010318	smarca2	95	74.162	ENSMEUG00000009812	SMARCA2	91	75.910	Notamacropus_eugenii
ENSELUG00000010318	smarca2	96	74.393	ENSOPRG00000013474	SMARCA2	92	76.439	Ochotona_princeps
ENSELUG00000010318	smarca2	93	78.912	ENSODEG00000005452	SMARCA2	92	80.623	Octodon_degus
ENSELUG00000010318	smarca2	99	82.162	ENSONIG00000014163	SMARCA2	95	83.735	Oreochromis_niloticus
ENSELUG00000010318	smarca2	54	82.316	ENSOANG00000008299	-	95	88.251	Ornithorhynchus_anatinus
ENSELUG00000010318	smarca2	96	78.037	ENSOCUG00000006320	SMARCA2	93	79.715	Oryctolagus_cuniculus
ENSELUG00000010318	smarca2	99	81.258	ENSORLG00000020820	SMARCA2	100	81.731	Oryzias_latipes
ENSELUG00000010318	smarca2	99	81.447	ENSORLG00015006289	SMARCA2	99	81.865	Oryzias_latipes_hsok
ENSELUG00000010318	smarca2	99	81.989	ENSOMEG00000009736	-	97	82.990	Oryzias_melastigma
ENSELUG00000010318	smarca2	77	87.280	ENSOGAG00000017053	SMARCA2	93	79.078	Otolemur_garnettii
ENSELUG00000010318	smarca2	96	78.735	ENSOARG00000013265	SMARCA2	92	79.931	Ovis_aries
ENSELUG00000010318	smarca2	87	87.819	ENSPPAG00000038717	SMARCA2	90	87.008	Pan_paniscus
ENSELUG00000010318	smarca2	96	79.598	ENSPPRG00000001879	SMARCA2	92	81.007	Panthera_pardus
ENSELUG00000010318	smarca2	96	79.236	ENSPTRG00000051168	SMARCA2	95	80.290	Pan_troglodytes
ENSELUG00000010318	smarca2	93	77.113	ENSPANG00000025121	SMARCA2	92	76.539	Papio_anubis
ENSELUG00000010318	smarca2	99	82.691	ENSPKIG00000018469	-	95	84.074	Paramormyrops_kingsleyae
ENSELUG00000010318	smarca2	95	80.113	ENSPSIG00000006284	SMARCA2	92	81.318	Pelodiscus_sinensis
ENSELUG00000010318	smarca2	99	77.078	ENSPMGG00000013696	-	93	81.476	Periophthalmus_magnuspinnatus
ENSELUG00000010318	smarca2	96	77.978	ENSPEMG00000019821	Smarca2	92	79.905	Peromyscus_maniculatus_bairdii
ENSELUG00000010318	smarca2	99	70.842	ENSPMAG00000005337	-	94	71.560	Petromyzon_marinus
ENSELUG00000010318	smarca2	95	80.650	ENSPCIG00000015658	SMARCA2	93	81.140	Phascolarctos_cinereus
ENSELUG00000010318	smarca2	99	81.187	ENSPFOG00000001856	SMARCA2	95	82.484	Poecilia_formosa
ENSELUG00000010318	smarca2	99	80.543	ENSPLAG00000017829	SMARCA2	94	80.898	Poecilia_latipinna
ENSELUG00000010318	smarca2	99	80.662	ENSPMEG00000001815	-	95	82.025	Poecilia_mexicana
ENSELUG00000010318	smarca2	99	80.675	ENSPREG00000013800	SMARCA2	95	82.036	Poecilia_reticulata
ENSELUG00000010318	smarca2	96	78.973	ENSPPYG00000019258	SMARCA2	92	79.822	Pongo_abelii
ENSELUG00000010318	smarca2	74	94.286	ENSPCAG00000016969	SMARCA2	67	94.286	Procavia_capensis
ENSELUG00000010318	smarca2	96	77.516	ENSPCOG00000025709	SMARCA2	97	77.445	Propithecus_coquereli
ENSELUG00000010318	smarca2	89	89.189	ENSPVAG00000000901	SMARCA2	89	89.130	Pteropus_vampyrus
ENSELUG00000010318	smarca2	99	79.570	ENSPNYG00000004533	SMARCA2	95	81.213	Pundamilia_nyererei
ENSELUG00000010318	smarca2	99	81.739	ENSPNAG00000014635	smarca2	92	85.165	Pygocentrus_nattereri
ENSELUG00000010318	smarca2	96	77.839	ENSRNOG00000011931	Smarca2	92	79.741	Rattus_norvegicus
ENSELUG00000010318	smarca2	96	77.816	ENSRBIG00000038618	SMARCA2	97	79.955	Rhinopithecus_bieti
ENSELUG00000010318	smarca2	96	78.660	ENSRROG00000019271	SMARCA2	97	80.552	Rhinopithecus_roxellana
ENSELUG00000010318	smarca2	88	87.364	ENSSBOG00000034827	SMARCA2	87	87.573	Saimiri_boliviensis_boliviensis
ENSELUG00000010318	smarca2	95	80.720	ENSSHAG00000007884	SMARCA2	92	81.973	Sarcophilus_harrisii
ENSELUG00000010318	smarca2	98	80.190	ENSSFOG00015014870	SMARCA2	97	83.659	Scleropages_formosus
ENSELUG00000010318	smarca2	99	80.823	ENSSMAG00000013707	SMARCA2	95	84.150	Scophthalmus_maximus
ENSELUG00000010318	smarca2	96	84.584	ENSSDUG00000008852	-	94	84.360	Seriola_dumerili
ENSELUG00000010318	smarca2	96	83.434	ENSSLDG00000025449	SMARCA2	95	83.143	Seriola_lalandi_dorsalis
ENSELUG00000010318	smarca2	87	93.846	ENSSARG00000007888	SMARCA2	87	89.130	Sorex_araneus
ENSELUG00000010318	smarca2	92	79.707	ENSSPUG00000001629	SMARCA2	92	79.498	Sphenodon_punctatus
ENSELUG00000010318	smarca2	98	83.452	ENSSPAG00000020091	-	99	82.780	Stegastes_partitus
ENSELUG00000010318	smarca2	96	78.958	ENSSSCG00000005232	SMARCA2	92	80.842	Sus_scrofa
ENSELUG00000010318	smarca2	95	80.226	ENSTGUG00000005460	SMARCA2	92	81.497	Taeniopygia_guttata
ENSELUG00000010318	smarca2	99	79.721	ENSTRUG00000015619	SMARCA2	95	83.001	Takifugu_rubripes
ENSELUG00000010318	smarca2	67	92.857	ENSTBEG00000008767	SMARCA2	66	92.857	Tupaia_belangeri
ENSELUG00000010318	smarca2	95	79.351	ENSTTRG00000002033	SMARCA2	93	79.122	Tursiops_truncatus
ENSELUG00000010318	smarca2	96	76.768	ENSUAMG00000024701	SMARCA2	97	79.899	Ursus_americanus
ENSELUG00000010318	smarca2	88	76.631	ENSVPAG00000001204	SMARCA2	95	78.495	Vicugna_pacos
ENSELUG00000010318	smarca2	78	85.495	ENSVVUG00000004598	SMARCA2	96	85.714	Vulpes_vulpes
ENSELUG00000010318	smarca2	92	82.697	ENSXETG00000015299	smarca2	92	77.467	Xenopus_tropicalis
ENSELUG00000010318	smarca2	96	77.732	ENSXCOG00000011073	SMARCA2	99	80.115	Xiphophorus_couchianus
ENSELUG00000010318	smarca2	99	80.119	ENSXMAG00000015611	SMARCA2	95	83.037	Xiphophorus_maculatus