EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000010345 (Gene tree)
Gene ID: 105012532
Gene Symbol: rab42a
Alias: wu:fk59e12|zgc:73061
Full Name: ras-related protein Rab-39B
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 1790 bases
Position: chrLG10:12726294-12728083
Accession: 105012532
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000009856	MMR_HSR1	PF01926.23	0.0001	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000003185	-	780	XM_010873437	ENSELUP00000009856	216 (aa)	XP_010871739	UPI000576589D

Gene Model

Click here to download ENSELUG00000010345's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000010345's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000010345	rab42a	85	42.623	ENSELUG00000012035	rab11al	84	42.623
ENSELUG00000010345	rab42a	81	38.857	ENSELUG00000003805	rab18a	84	38.857
ENSELUG00000010345	rab42a	75	37.126	ENSELUG00000016622	rab9a	82	37.126
ENSELUG00000010345	rab42a	74	44.375	ENSELUG00000022997	rab30	78	44.375
ENSELUG00000010345	rab42a	70	33.775	ENSELUG00000004712	HRAS	85	32.927
ENSELUG00000010345	rab42a	84	34.946	ENSELUG00000000175	zgc:100918	89	34.946
ENSELUG00000010345	rab42a	83	41.667	ENSELUG00000012060	rab25b	84	41.667
ENSELUG00000010345	rab42a	75	34.940	ENSELUG00000006539	RAB7A	79	34.940
ENSELUG00000010345	rab42a	77	42.515	ENSELUG00000012801	rab13	83	42.515
ENSELUG00000010345	rab42a	76	43.293	ENSELUG00000023972	rab35	80	43.293
ENSELUG00000010345	rab42a	75	39.521	ENSELUG00000004378	rab9b	82	39.521
ENSELUG00000010345	rab42a	68	43.243	ENSELUG00000002575	rab33ba	61	43.243
ENSELUG00000010345	rab42a	81	30.682	ENSELUG00000016028	rhebl1	93	30.682
ENSELUG00000010345	rab42a	74	40.244	ENSELUG00000013219	rab33a	68	40.244
ENSELUG00000010345	rab42a	88	40.526	ENSELUG00000015413	rab1ab	93	40.526
ENSELUG00000010345	rab42a	77	34.940	ENSELUG00000008604	rras2	81	34.940
ENSELUG00000010345	rab42a	82	41.011	ENSELUG00000012166	RAB1A	83	41.011
ENSELUG00000010345	rab42a	82	40.678	ENSELUG00000006604	rab25a	82	40.678
ENSELUG00000010345	rab42a	74	37.888	ENSELUG00000023120	-	74	37.888
ENSELUG00000010345	rab42a	81	40.909	ENSELUG00000023247	si:dkey-16l2.16	83	40.909
ENSELUG00000010345	rab42a	78	30.952	ENSELUG00000018367	rheb	89	30.952
ENSELUG00000010345	rab42a	84	41.436	ENSELUG00000020948	-	93	46.341
ENSELUG00000010345	rab42a	75	44.172	ENSELUG00000020012	rab15	76	44.172
ENSELUG00000010345	rab42a	97	33.493	ENSELUG00000010439	-	89	33.493
ENSELUG00000010345	rab42a	84	41.436	ENSELUG00000000916	-	87	47.154
ENSELUG00000010345	rab42a	73	38.854	ENSELUG00000008876	rab6a	75	38.854
ENSELUG00000010345	rab42a	76	31.138	ENSELUG00000013666	si:cabz01085950.1	82	31.138
ENSELUG00000010345	rab42a	72	33.544	ENSELUG00000020788	rab23	70	32.941
ENSELUG00000010345	rab42a	85	38.587	ENSELUG00000023815	-	91	38.587
ENSELUG00000010345	rab42a	85	39.674	ENSELUG00000012428	-	91	39.674
ENSELUG00000010345	rab42a	97	38.095	ENSELUG00000002999	rab11a	88	46.154
ENSELUG00000010345	rab42a	88	46.842	ENSELUG00000023964	rab2a	89	46.842
ENSELUG00000010345	rab42a	100	56.944	ENSELUG00000013957	-	100	56.944
ENSELUG00000010345	rab42a	89	36.458	ENSELUG00000014785	rab4a	89	36.458
ENSELUG00000010345	rab42a	96	39.151	ENSELUG00000007123	rab12	84	39.151
ENSELUG00000010345	rab42a	73	37.580	ENSELUG00000022470	rab6bb	75	37.580
ENSELUG00000010345	rab42a	76	40.000	ENSELUG00000016450	rab18b	80	40.000
ENSELUG00000010345	rab42a	98	38.318	ENSELUG00000009832	rab14	97	38.318
ENSELUG00000010345	rab42a	86	30.151	ENSELUG00000013206	rasl11a	76	30.151
ENSELUG00000010345	rab42a	76	34.337	ENSELUG00000018921	rab36	63	34.337
ENSELUG00000010345	rab42a	93	34.500	ENSELUG00000001257	rab6ba	88	34.500
ENSELUG00000010345	rab42a	99	36.916	ENSELUG00000011680	zgc:171927	99	36.916
ENSELUG00000010345	rab42a	74	32.919	ENSELUG00000003058	KRAS	98	31.414
ENSELUG00000010345	rab42a	76	34.756	ENSELUG00000013436	rab5ab	75	34.756
ENSELUG00000010345	rab42a	85	41.530	ENSELUG00000021148	rab11bb	83	41.530
ENSELUG00000010345	rab42a	86	32.258	ENSELUG00000006480	rheb	94	32.258
ENSELUG00000010345	rab42a	79	32.948	ENSELUG00000005597	rab34b	67	32.948
ENSELUG00000010345	rab42a	98	38.785	ENSELUG00000013571	-	97	38.785
ENSELUG00000010345	rab42a	76	36.585	ENSELUG00000018516	rab5c	75	36.585
ENSELUG00000010345	rab42a	96	30.189	ENSELUG00000022157	rab34a	77	30.189
ENSELUG00000010345	rab42a	75	34.940	ENSELUG00000016682	-	79	34.940
ENSELUG00000010345	rab42a	79	38.286	ENSELUG00000021199	RAB9A	80	38.286
ENSELUG00000010345	rab42a	74	41.875	ENSELUG00000005989	RAB15	73	41.875
ENSELUG00000010345	rab42a	100	56.481	ENSELUG00000005304	rab39ba	100	56.481
ENSELUG00000010345	rab42a	81	34.659	ENSELUG00000015343	rab22a	90	34.659
ENSELUG00000010345	rab42a	85	41.530	ENSELUG00000019240	-	93	41.530
ENSELUG00000010345	rab42a	68	40.881	ENSELUG00000011352	-	61	40.881
ENSELUG00000010345	rab42a	70	35.526	ENSELUG00000005090	si:ch73-116o1.2	68	35.366
ENSELUG00000010345	rab42a	82	32.222	ENSELUG00000017558	mras	79	35.542
ENSELUG00000010345	rab42a	76	35.366	ENSELUG00000006462	rab5aa	75	35.366

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000010345	rab42a	100	90.367	ENSAPOG00000009188	rab42a	100	90.367	Acanthochromis_polyacanthus
ENSELUG00000010345	rab42a	100	90.367	ENSACIG00000003102	rab42a	100	90.367	Amphilophus_citrinellus
ENSELUG00000010345	rab42a	100	89.450	ENSAOCG00000012921	rab42a	83	89.450	Amphiprion_ocellaris
ENSELUG00000010345	rab42a	100	89.450	ENSAPEG00000007713	rab42a	83	89.450	Amphiprion_percula
ENSELUG00000010345	rab42a	100	89.908	ENSATEG00000009052	rab42a	100	89.908	Anabas_testudineus
ENSELUG00000010345	rab42a	100	90.783	ENSACLG00000007514	rab42a	100	90.783	Astatotilapia_calliptera
ENSELUG00000010345	rab42a	100	89.352	ENSAMXG00000032729	rab42a	100	89.352	Astyanax_mexicanus
ENSELUG00000010345	rab42a	100	87.615	ENSCSEG00000010582	rab42a	100	87.615	Cynoglossus_semilaevis
ENSELUG00000010345	rab42a	100	89.352	ENSDARG00000034215	rab42a	100	89.352	Danio_rerio
ENSELUG00000010345	rab42a	100	45.622	ENSDARG00000102580	CU571310.1	99	45.622	Danio_rerio
ENSELUG00000010345	rab42a	100	89.450	ENSFHEG00000013106	rab42a	100	89.450	Fundulus_heteroclitus
ENSELUG00000010345	rab42a	100	88.532	ENSGAFG00000002141	rab42a	100	88.532	Gambusia_affinis
ENSELUG00000010345	rab42a	100	90.783	ENSHBUG00000015126	rab42a	82	90.783	Haplochromis_burtoni
ENSELUG00000010345	rab42a	100	87.037	ENSIPUG00000011376	rab42a	100	87.037	Ictalurus_punctatus
ENSELUG00000010345	rab42a	100	88.991	ENSKMAG00000007267	rab42a	100	88.991	Kryptolebias_marmoratus
ENSELUG00000010345	rab42a	100	89.862	ENSLBEG00000001193	rab42a	100	89.862	Labrus_bergylta
ENSELUG00000010345	rab42a	100	62.963	ENSLACG00000012755	-	100	62.963	Latimeria_chalumnae
ENSELUG00000010345	rab42a	100	82.870	ENSLOCG00000003453	rab42a	100	82.870	Lepisosteus_oculatus
ENSELUG00000010345	rab42a	100	50.917	ENSLOCG00000015825	-	99	50.917	Lepisosteus_oculatus
ENSELUG00000010345	rab42a	100	90.367	ENSMAMG00000002296	rab42a	100	90.367	Mastacembelus_armatus
ENSELUG00000010345	rab42a	100	90.783	ENSMZEG00005012460	rab42a	82	90.783	Maylandia_zebra
ENSELUG00000010345	rab42a	100	87.156	ENSMMOG00000014358	rab42a	100	87.156	Mola_mola
ENSELUG00000010345	rab42a	100	90.367	ENSNBRG00000021487	rab42a	82	90.367	Neolamprologus_brichardi
ENSELUG00000010345	rab42a	100	89.450	ENSORLG00000022335	rab42a	100	89.450	Oryzias_latipes
ENSELUG00000010345	rab42a	100	89.450	ENSORLG00020013895	rab42a	100	89.450	Oryzias_latipes_hni
ENSELUG00000010345	rab42a	100	89.450	ENSORLG00015004273	rab42a	100	89.450	Oryzias_latipes_hsok
ENSELUG00000010345	rab42a	100	89.450	ENSOMEG00000020418	rab42a	100	89.450	Oryzias_melastigma
ENSELUG00000010345	rab42a	99	47.907	ENSPKIG00000015234	-	99	47.907	Paramormyrops_kingsleyae
ENSELUG00000010345	rab42a	100	76.852	ENSPKIG00000021215	-	100	76.852	Paramormyrops_kingsleyae
ENSELUG00000010345	rab42a	91	93.909	ENSPMGG00000024112	rab42a	90	93.909	Periophthalmus_magnuspinnatus
ENSELUG00000010345	rab42a	100	88.991	ENSPFOG00000004838	rab42a	82	88.991	Poecilia_formosa
ENSELUG00000010345	rab42a	100	88.991	ENSPLAG00000005628	rab42a	100	88.991	Poecilia_latipinna
ENSELUG00000010345	rab42a	100	88.991	ENSPMEG00000019497	rab42a	100	88.991	Poecilia_mexicana
ENSELUG00000010345	rab42a	100	88.532	ENSPREG00000013962	rab42a	100	88.532	Poecilia_reticulata
ENSELUG00000010345	rab42a	100	90.783	ENSPNYG00000010325	rab42a	82	90.783	Pundamilia_nyererei
ENSELUG00000010345	rab42a	100	88.889	ENSPNAG00000016567	rab42a	100	88.889	Pygocentrus_nattereri
ENSELUG00000010345	rab42a	100	47.005	ENSSFOG00015016000	-	97	47.005	Scleropages_formosus
ENSELUG00000010345	rab42a	100	84.722	ENSSFOG00015020732	rab42a	100	84.722	Scleropages_formosus
ENSELUG00000010345	rab42a	100	88.532	ENSSMAG00000020311	rab42a	100	88.532	Scophthalmus_maximus
ENSELUG00000010345	rab42a	100	89.908	ENSSDUG00000011851	rab42a	100	89.908	Seriola_dumerili
ENSELUG00000010345	rab42a	100	89.908	ENSSLDG00000020354	rab42a	100	89.908	Seriola_lalandi_dorsalis
ENSELUG00000010345	rab42a	100	90.367	ENSSPAG00000016167	rab42a	100	90.367	Stegastes_partitus
ENSELUG00000010345	rab42a	100	89.450	ENSTRUG00000010224	rab42a	100	89.450	Takifugu_rubripes
ENSELUG00000010345	rab42a	100	88.991	ENSXCOG00000003428	rab42a	100	88.991	Xiphophorus_couchianus
ENSELUG00000010345	rab42a	100	88.991	ENSXMAG00000028376	rab42a	100	88.991	Xiphophorus_maculatus