EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000010390 (Gene tree)
Gene ID: 105020895
Gene Symbol: -
Alias: -
Full Name: pre-mRNA processing factor 38B
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 23543 bases
Position: chrLG03:12779039-12802581
Accession: 105020895
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000032488	PRP38	PF03371.15	3.9e-56	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000003072	-	5037	XM_010888241	ENSELUP00000032488	528 (aa)	XP_010886543	-

Gene Model

Click here to download ENSELUG00000010390's gene model file

Pathways

Pathway ID	Pathway Name	Source
els03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000010390's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000010390	-	97	63.048	ENSATEG00000014482	-	100	67.495	Anabas_testudineus
ENSELUG00000010390	-	54	84.068	ENSAMXG00000039494	-	51	80.205	Astyanax_mexicanus
ENSELUG00000010390	-	50	78.113	ENSBTAG00000047874	PRPF38B	57	71.613	Bos_taurus
ENSELUG00000010390	-	50	45.522	WBGene00022434	Y108G3AL.2	62	53.695	Caenorhabditis_elegans
ENSELUG00000010390	-	50	64.925	ENSCAFG00020010992	-	95	50.640	Canis_lupus_dingo
ENSELUG00000010390	-	50	78.113	ENSCHIG00000024357	-	57	71.613	Capra_hircus
ENSELUG00000010390	-	50	80.669	ENSCPOG00000039545	-	57	71.061	Cavia_porcellus
ENSELUG00000010390	-	50	80.224	ENSCLAG00000005801	-	96	49.658	Chinchilla_lanigera
ENSELUG00000010390	-	56	57.627	ENSCSAVG00000009443	-	69	76.471	Ciona_savignyi
ENSELUG00000010390	-	70	65.632	ENSCSEG00000015030	-	100	65.392	Cynoglossus_semilaevis
ENSELUG00000010390	-	50	76.493	ENSETEG00000014690	-	69	69.453	Echinops_telfairi
ENSELUG00000010390	-	97	68.462	ENSGMOG00000012080	-	62	83.221	Gadus_morhua
ENSELUG00000010390	-	97	69.290	ENSGAFG00000008943	-	100	63.098	Gambusia_affinis
ENSELUG00000010390	-	50	78.113	ENSHGLG00000016583	PRPF38B	53	74.061	Heterocephalus_glaber_female
ENSELUG00000010390	-	50	78.113	ENSHGLG00100015525	-	53	74.061	Heterocephalus_glaber_male
ENSELUG00000010390	-	50	85.768	ENSHCOG00000001071	-	99	64.961	Hippocampus_comes
ENSELUG00000010390	-	97	64.943	ENSKMAG00000005540	-	100	63.931	Kryptolebias_marmoratus
ENSELUG00000010390	-	100	60.213	ENSLACG00000015511	-	99	57.041	Latimeria_chalumnae
ENSELUG00000010390	-	50	79.926	ENSMOCG00000020285	-	57	71.290	Microtus_ochrogaster
ENSELUG00000010390	-	96	67.118	ENSMMOG00000011639	-	99	63.760	Mola_mola
ENSELUG00000010390	-	61	76.780	ENSMODG00000002350	-	87	77.860	Monodelphis_domestica
ENSELUG00000010390	-	97	68.069	ENSMALG00000019479	-	100	67.495	Monopterus_albus
ENSELUG00000010390	-	92	71.573	ENSONIG00000010129	-	98	69.355	Oreochromis_niloticus
ENSELUG00000010390	-	75	62.759	ENSOANG00000007343	-	71	73.510	Ornithorhynchus_anatinus
ENSELUG00000010390	-	97	66.795	ENSORLG00000015621	-	95	88.757	Oryzias_latipes
ENSELUG00000010390	-	97	66.988	ENSORLG00020016276	-	94	88.757	Oryzias_latipes_hni
ENSELUG00000010390	-	97	66.602	ENSORLG00015016270	-	80	88.757	Oryzias_latipes_hsok
ENSELUG00000010390	-	97	66.023	ENSOMEG00000022050	-	97	88.304	Oryzias_melastigma
ENSELUG00000010390	-	50	78.113	ENSOGAG00000027048	-	97	48.983	Otolemur_garnettii
ENSELUG00000010390	-	54	72.148	ENSOARG00000018899	-	56	72.848	Ovis_aries
ENSELUG00000010390	-	95	65.362	ENSPKIG00000004815	-	58	76.451	Paramormyrops_kingsleyae
ENSELUG00000010390	-	90	68.399	ENSPKIG00000017291	-	54	79.585	Paramormyrops_kingsleyae
ENSELUG00000010390	-	97	69.674	ENSPFOG00000004025	-	88	88.690	Poecilia_formosa
ENSELUG00000010390	-	97	69.674	ENSPLAG00000019842	-	100	62.333	Poecilia_latipinna
ENSELUG00000010390	-	98	69.450	ENSPMEG00000004807	-	99	63.138	Poecilia_mexicana
ENSELUG00000010390	-	97	69.098	ENSPREG00000015599	-	89	88.757	Poecilia_reticulata
ENSELUG00000010390	-	91	65.455	ENSPNAG00000017484	-	96	61.584	Pygocentrus_nattereri
ENSELUG00000010390	-	50	79.926	ENSRNOG00000020438	Prpf38b	57	71.290	Rattus_norvegicus
ENSELUG00000010390	-	90	65.618	ENSSFOG00015011251	-	88	86.982	Scleropages_formosus
ENSELUG00000010390	-	97	67.939	ENSSLDG00000023487	-	89	87.574	Seriola_lalandi_dorsalis
ENSELUG00000010390	-	96	64.922	ENSTRUG00000011765	-	99	64.854	Takifugu_rubripes
ENSELUG00000010390	-	53	83.275	ENSTNIG00000015299	-	99	81.787	Tetraodon_nigroviridis
ENSELUG00000010390	-	50	69.057	ENSTBEG00000007504	-	96	52.259	Tupaia_belangeri
ENSELUG00000010390	-	50	78.113	ENSTTRG00000006479	-	57	71.613	Tursiops_truncatus
ENSELUG00000010390	-	92	58.365	ENSXETG00000005260	prpf38b	96	53.696	Xenopus_tropicalis
ENSELUG00000010390	-	97	69.290	ENSXCOG00000008329	-	100	65.209	Xiphophorus_couchianus
ENSELUG00000010390	-	97	69.098	ENSXMAG00000023831	-	100	65.019	Xiphophorus_maculatus