EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000010454 (Gene tree)
Gene ID: 105027631
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 184-like
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 10993 bases
Position: chrAZJR03000550.1:393554-404546
Accession: 105027631
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000032531	zf-C2H2	PF00096.26	6e-41	1	6
ENSELUP00000032531	zf-C2H2	PF00096.26	6e-41	2	6
ENSELUP00000032531	zf-C2H2	PF00096.26	6e-41	3	6
ENSELUP00000032531	zf-C2H2	PF00096.26	6e-41	4	6
ENSELUP00000032531	zf-C2H2	PF00096.26	6e-41	5	6
ENSELUP00000032531	zf-C2H2	PF00096.26	6e-41	6	6
ENSELUP00000032531	zf-met	PF12874.7	0.00062	1	2
ENSELUP00000032531	zf-met	PF12874.7	0.00062	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000002987	-	6162	XM_010899799	ENSELUP00000032531	995 (aa)	XP_010898101	UPI00057616AB

Gene Model

Click here to download ENSELUG00000010454's gene model file

Pathways

Pathway ID	Pathway Name	Source
els05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000010454's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000010454	-	63	43.636	ENSELUG00000004677	-	59	43.636
ENSELUG00000010454	-	65	31.136	ENSELUG00000017958	-	74	31.502
ENSELUG00000010454	-	98	35.455	ENSELUG00000001991	-	70	46.479
ENSELUG00000010454	-	66	42.017	ENSELUG00000013094	-	96	40.909
ENSELUG00000010454	-	85	41.589	ENSELUG00000011838	-	84	44.271
ENSELUG00000010454	-	98	41.752	ENSELUG00000010470	-	99	47.525
ENSELUG00000010454	-	98	31.439	ENSELUG00000021381	-	97	61.905
ENSELUG00000010454	-	65	31.987	ENSELUG00000021229	-	84	31.650
ENSELUG00000010454	-	65	30.189	ENSELUG00000019008	-	91	33.333
ENSELUG00000010454	-	64	31.835	ENSELUG00000022942	-	62	30.526
ENSELUG00000010454	-	63	40.336	ENSELUG00000013844	-	60	40.336
ENSELUG00000010454	-	65	37.719	ENSELUG00000024007	-	84	37.719
ENSELUG00000010454	-	64	31.250	ENSELUG00000018737	znf526	65	31.250
ENSELUG00000010454	-	63	42.553	ENSELUG00000018405	-	95	40.870
ENSELUG00000010454	-	64	37.719	ENSELUG00000020211	znf236	75	37.719
ENSELUG00000010454	-	67	38.318	ENSELUG00000016397	-	52	39.252
ENSELUG00000010454	-	50	40.741	ENSELUG00000021551	-	57	40.741
ENSELUG00000010454	-	63	32.852	ENSELUG00000013311	-	67	31.522
ENSELUG00000010454	-	64	41.441	ENSELUG00000008797	-	76	41.441
ENSELUG00000010454	-	64	50.000	ENSELUG00000017463	-	87	50.000
ENSELUG00000010454	-	65	37.398	ENSELUG00000019204	-	87	30.588
ENSELUG00000010454	-	63	35.398	ENSELUG00000013321	-	90	35.398
ENSELUG00000010454	-	51	43.363	ENSELUG00000000281	-	68	52.830
ENSELUG00000010454	-	65	30.252	ENSELUG00000010423	znf646	81	30.252
ENSELUG00000010454	-	64	37.975	ENSELUG00000013245	-	96	31.687
ENSELUG00000010454	-	63	48.214	ENSELUG00000012597	-	99	48.214
ENSELUG00000010454	-	63	40.187	ENSELUG00000009575	-	97	40.187
ENSELUG00000010454	-	65	31.165	ENSELUG00000013064	-	74	31.165
ENSELUG00000010454	-	64	44.262	ENSELUG00000021499	-	79	44.262
ENSELUG00000010454	-	63	30.000	ENSELUG00000005894	prdm5	67	30.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000010454	-	63	38.095	ENSAPEG00000019755	-	84	38.095	Amphiprion_percula
ENSELUG00000010454	-	75	42.353	ENSCSAVG00000009574	-	99	42.353	Ciona_savignyi
ENSELUG00000010454	-	66	46.250	ENSDARG00000012642	si:ch211-266d19.4	96	41.237	Danio_rerio
ENSELUG00000010454	-	63	30.597	ENSFHEG00000012990	-	93	30.597	Fundulus_heteroclitus
ENSELUG00000010454	-	87	44.770	ENSFHEG00000007344	-	80	44.156	Fundulus_heteroclitus
ENSELUG00000010454	-	63	37.500	ENSHCOG00000014887	-	76	38.372	Hippocampus_comes
ENSELUG00000010454	-	94	30.739	ENSKMAG00000012909	-	98	31.549	Kryptolebias_marmoratus
ENSELUG00000010454	-	63	31.081	ENSORLG00015018254	-	97	31.081	Oryzias_latipes_hsok
ENSELUG00000010454	-	63	41.584	ENSPMGG00000000458	-	95	33.333	Periophthalmus_magnuspinnatus
ENSELUG00000010454	-	66	34.247	ENSPMGG00000022524	-	95	36.441	Periophthalmus_magnuspinnatus
ENSELUG00000010454	-	63	37.302	ENSPMAG00000007983	-	97	42.056	Petromyzon_marinus
ENSELUG00000010454	-	55	43.636	ENSPLAG00000011254	-	82	43.636	Poecilia_latipinna
ENSELUG00000010454	-	56	43.363	ENSPMEG00000007503	-	76	43.363	Poecilia_mexicana
ENSELUG00000010454	-	56	43.363	ENSPREG00000015352	-	75	43.363	Poecilia_reticulata
ENSELUG00000010454	-	64	30.579	ENSTNIG00000008154	-	100	30.579	Tetraodon_nigroviridis
ENSELUG00000010454	-	58	43.636	ENSXMAG00000022242	-	89	43.636	Xiphophorus_maculatus