EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000010470 (Gene tree)
Gene ID: 105027633
Gene Symbol: -
Alias: -
Full Name: zinc finger protein Xfin-like
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 13618 bases
Position: chrAZJR03000550.1:379829-393446
Accession: 105027633
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000009963	zf-C2H2	PF00096.26	9.8e-33	1	3
ENSELUP00000009963	zf-C2H2	PF00096.26	9.8e-33	2	3
ENSELUP00000009963	zf-C2H2	PF00096.26	9.8e-33	3	3
ENSELUP00000009963	zf-met	PF12874.7	2.7e-09	1	2
ENSELUP00000009963	zf-met	PF12874.7	2.7e-09	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000002939	-	4906	XM_010899802	ENSELUP00000009963	1145 (aa)	XP_010898104	UPI000577277C

Gene Model

Click here to download ENSELUG00000010470's gene model file

Pathways

Pathway ID	Pathway Name	Source
els05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000010470's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000010470	-	57	33.117	ENSELUG00000001968	-	71	33.117
ENSELUG00000010470	-	56	45.652	ENSELUG00000018405	-	97	45.652
ENSELUG00000010470	-	82	39.749	ENSELUG00000011838	-	76	45.026
ENSELUG00000010470	-	75	45.299	ENSELUG00000002844	-	77	44.298
ENSELUG00000010470	-	54	42.593	ENSELUG00000013844	-	72	42.593
ENSELUG00000010470	-	57	36.434	ENSELUG00000021248	-	84	36.434
ENSELUG00000010470	-	57	48.810	ENSELUG00000017463	-	84	45.070
ENSELUG00000010470	-	62	40.876	ENSELUG00000013094	-	97	38.158
ENSELUG00000010470	-	56	44.340	ENSELUG00000012597	-	99	44.340
ENSELUG00000010470	-	56	36.879	ENSELUG00000018970	-	84	36.879
ENSELUG00000010470	-	80	34.661	ENSELUG00000001909	-	77	40.887
ENSELUG00000010470	-	64	40.171	ENSELUG00000005912	-	85	40.171
ENSELUG00000010470	-	61	39.535	ENSELUG00000013348	-	94	39.535
ENSELUG00000010470	-	71	35.433	ENSELUG00000021551	-	74	35.433
ENSELUG00000010470	-	99	47.525	ENSELUG00000010454	-	98	41.752
ENSELUG00000010470	-	73	46.454	ENSELUG00000021560	-	96	47.863
ENSELUG00000010470	-	77	44.534	ENSELUG00000001991	-	77	48.113
ENSELUG00000010470	-	64	40.678	ENSELUG00000019008	-	92	40.678
ENSELUG00000010470	-	75	52.049	ENSELUG00000020794	-	81	56.373
ENSELUG00000010470	-	82	60.345	ENSELUG00000021381	-	97	62.500
ENSELUG00000010470	-	63	40.179	ENSELUG00000013796	-	61	40.179
ENSELUG00000010470	-	65	38.583	ENSELUG00000013245	-	93	37.162
ENSELUG00000010470	-	61	44.275	ENSELUG00000000485	-	92	44.275
ENSELUG00000010470	-	60	40.230	ENSELUG00000007694	-	87	40.230
ENSELUG00000010470	-	62	30.726	ENSELUG00000019204	-	95	30.726
ENSELUG00000010470	-	54	42.500	ENSELUG00000020211	znf236	70	42.500
ENSELUG00000010470	-	53	35.802	ENSELUG00000018737	znf526	51	35.802
ENSELUG00000010470	-	63	43.103	ENSELUG00000021499	-	97	43.103

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000010470	-	55	34.426	ENSCSEG00000018571	-	73	34.426	Cynoglossus_semilaevis
ENSELUG00000010470	-	56	32.143	ENSXCOG00000003001	-	88	32.143	Xiphophorus_couchianus