EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000010510 (Gene tree)
Gene ID: 105027229
Gene Symbol: rrp12
Alias: im:7142677|im:7149218|zgc:111822
Full Name: ribosomal RNA processing 12 homolog
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 14295 bases
Position: chrLG06:10420488-10434782
Accession: 105027229
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000009931	NUC173	PF08161.12	9.7e-71	1	1
ENSELUP00000009979	NUC173	PF08161.12	1.6e-70	1	1
ENSELUP00000032535	NUC173	PF08161.12	5.8e-69	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000002978	-	3702	-	ENSELUP00000032535	1233 (aa)	-	-
ENSELUT00000002912	-	4678	XM_010899214	ENSELUP00000009979	1336 (aa)	XP_010897516	-
ENSELUT00000002988	-	4696	-	ENSELUP00000009931	1180 (aa)	-	-

Gene Model

Click here to download ENSELUG00000010510's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000010510's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000010510	rrp12	97	69.792	ENSG00000052749	RRP12	100	79.688	Homo_sapiens
ENSELUG00000010510	rrp12	100	76.962	ENSAPOG00000013355	rrp12	99	77.666	Acanthochromis_polyacanthus
ENSELUG00000010510	rrp12	100	63.339	ENSAMEG00000000134	RRP12	99	63.720	Ailuropoda_melanoleuca
ENSELUG00000010510	rrp12	100	78.559	ENSACIG00000022673	rrp12	99	79.086	Amphilophus_citrinellus
ENSELUG00000010510	rrp12	100	79.780	ENSAOCG00000016149	rrp12	99	80.248	Amphiprion_ocellaris
ENSELUG00000010510	rrp12	100	77.956	ENSAPEG00000016023	rrp12	99	78.577	Amphiprion_percula
ENSELUG00000010510	rrp12	100	78.426	ENSATEG00000022627	rrp12	99	78.776	Anabas_testudineus
ENSELUG00000010510	rrp12	99	59.932	ENSAPLG00000014387	RRP12	99	59.475	Anas_platyrhynchos
ENSELUG00000010510	rrp12	97	68.085	ENSACAG00000002175	RRP12	99	59.382	Anolis_carolinensis
ENSELUG00000010510	rrp12	92	83.784	ENSANAG00000037485	RRP12	99	76.316	Aotus_nancymaae
ENSELUG00000010510	rrp12	99	77.816	ENSACLG00000007354	rrp12	99	78.278	Astatotilapia_calliptera
ENSELUG00000010510	rrp12	97	80.851	ENSAMXG00000012852	rrp12	99	74.496	Astyanax_mexicanus
ENSELUG00000010510	rrp12	97	68.539	ENSBTAG00000002191	RRP12	99	75.325	Bos_taurus
ENSELUG00000010510	rrp12	90	61.474	ENSCJAG00000016549	-	99	61.580	Callithrix_jacchus
ENSELUG00000010510	rrp12	100	63.087	ENSCAFG00000009043	RRP12	99	63.490	Canis_familiaris
ENSELUG00000010510	rrp12	100	63.087	ENSCAFG00020005991	RRP12	99	63.490	Canis_lupus_dingo
ENSELUG00000010510	rrp12	99	61.290	ENSCHIG00000011876	RRP12	99	61.503	Capra_hircus
ENSELUG00000010510	rrp12	55	54.805	ENSTSYG00000030210	-	99	54.820	Carlito_syrichta
ENSELUG00000010510	rrp12	100	57.131	ENSCAPG00000008991	RRP12	98	57.006	Cavia_aperea
ENSELUG00000010510	rrp12	100	62.532	ENSCPOG00000004215	RRP12	99	62.828	Cavia_porcellus
ENSELUG00000010510	rrp12	74	58.503	ENSCCAG00000033123	-	82	58.617	Cebus_capucinus
ENSELUG00000010510	rrp12	79	67.160	ENSCCAG00000024088	RRP12	99	69.466	Cebus_capucinus
ENSELUG00000010510	rrp12	97	61.717	ENSCATG00000045310	RRP12	99	59.969	Cercocebus_atys
ENSELUG00000010510	rrp12	99	62.363	ENSCLAG00000003753	RRP12	99	62.500	Chinchilla_lanigera
ENSELUG00000010510	rrp12	94	62.131	ENSCSAG00000005877	RRP12	99	62.021	Chlorocebus_sabaeus
ENSELUG00000010510	rrp12	57	71.547	ENSCHOG00000003095	-	60	71.547	Choloepus_hoffmanni
ENSELUG00000010510	rrp12	100	64.666	ENSCPBG00000011935	RRP12	97	64.745	Chrysemys_picta_bellii
ENSELUG00000010510	rrp12	67	38.896	ENSCSAVG00000006059	-	99	39.505	Ciona_savignyi
ENSELUG00000010510	rrp12	91	88.889	ENSCANG00000031653	RRP12	99	70.115	Colobus_angolensis_palliatus
ENSELUG00000010510	rrp12	96	63.430	ENSCGRG00001004338	Rrp12	99	63.396	Cricetulus_griseus_chok1gshd
ENSELUG00000010510	rrp12	100	63.721	ENSCGRG00000011965	Rrp12	99	63.089	Cricetulus_griseus_crigri
ENSELUG00000010510	rrp12	100	77.034	ENSCSEG00000007799	rrp12	99	77.149	Cynoglossus_semilaevis
ENSELUG00000010510	rrp12	100	78.069	ENSCVAG00000003418	rrp12	99	78.217	Cyprinodon_variegatus
ENSELUG00000010510	rrp12	99	72.789	ENSDARG00000022410	rrp12	99	72.791	Danio_rerio
ENSELUG00000010510	rrp12	100	61.933	ENSDNOG00000005120	RRP12	99	62.943	Dasypus_novemcinctus
ENSELUG00000010510	rrp12	97	64.686	ENSDORG00000009199	Rrp12	99	63.279	Dipodomys_ordii
ENSELUG00000010510	rrp12	96	52.273	FBgn0030504	CG2691	92	52.830	Drosophila_melanogaster
ENSELUG00000010510	rrp12	90	61.111	ENSETEG00000002455	RRP12	92	70.000	Echinops_telfairi
ENSELUG00000010510	rrp12	86	66.667	ENSEBUG00000006555	rrp12	99	66.667	Eptatretus_burgeri
ENSELUG00000010510	rrp12	100	63.131	ENSEASG00005008693	RRP12	99	63.867	Equus_asinus_asinus
ENSELUG00000010510	rrp12	100	63.215	ENSECAG00000010892	RRP12	99	63.525	Equus_caballus
ENSELUG00000010510	rrp12	62	60.000	ENSEEUG00000005447	-	65	60.000	Erinaceus_europaeus
ENSELUG00000010510	rrp12	97	68.966	ENSFCAG00000028639	RRP12	99	68.966	Felis_catus
ENSELUG00000010510	rrp12	99	62.669	ENSFALG00000008458	RRP12	99	62.593	Ficedula_albicollis
ENSELUG00000010510	rrp12	100	62.057	ENSFDAG00000019108	RRP12	95	62.269	Fukomys_damarensis
ENSELUG00000010510	rrp12	100	69.231	ENSFHEG00000004148	rrp12	99	70.124	Fundulus_heteroclitus
ENSELUG00000010510	rrp12	94	77.368	ENSGMOG00000004188	rrp12	100	68.981	Gadus_morhua
ENSELUG00000010510	rrp12	100	62.130	ENSGALG00000041331	RRP12	96	62.351	Gallus_gallus
ENSELUG00000010510	rrp12	100	77.561	ENSGAFG00000009038	rrp12	99	77.537	Gambusia_affinis
ENSELUG00000010510	rrp12	100	76.799	ENSGACG00000007175	rrp12	99	77.364	Gasterosteus_aculeatus
ENSELUG00000010510	rrp12	69	66.667	ENSGAGG00000019169	RRP12	96	67.013	Gopherus_agassizii
ENSELUG00000010510	rrp12	97	69.792	ENSGGOG00000014850	RRP12	99	69.540	Gorilla_gorilla
ENSELUG00000010510	rrp12	99	78.242	ENSHBUG00000023527	rrp12	99	78.666	Haplochromis_burtoni
ENSELUG00000010510	rrp12	100	62.511	ENSHGLG00000016772	RRP12	99	62.809	Heterocephalus_glaber_female
ENSELUG00000010510	rrp12	100	62.511	ENSHGLG00100015110	RRP12	99	62.809	Heterocephalus_glaber_male
ENSELUG00000010510	rrp12	100	74.576	ENSHCOG00000019519	rrp12	99	75.039	Hippocampus_comes
ENSELUG00000010510	rrp12	94	84.615	ENSIPUG00000000311	RRP12	99	73.220	Ictalurus_punctatus
ENSELUG00000010510	rrp12	100	62.901	ENSSTOG00000006515	RRP12	99	63.629	Ictidomys_tridecemlineatus
ENSELUG00000010510	rrp12	100	63.415	ENSJJAG00000000110	Rrp12	99	63.179	Jaculus_jaculus
ENSELUG00000010510	rrp12	96	92.105	ENSKMAG00000020621	rrp12	99	77.812	Kryptolebias_marmoratus
ENSELUG00000010510	rrp12	100	74.915	ENSLBEG00000015335	rrp12	99	75.485	Labrus_bergylta
ENSELUG00000010510	rrp12	72	65.591	ENSLACG00000016633	RRP12	81	66.045	Latimeria_chalumnae
ENSELUG00000010510	rrp12	99	68.913	ENSLOCG00000003846	rrp12	99	68.942	Lepisosteus_oculatus
ENSELUG00000010510	rrp12	100	62.982	ENSLAFG00000015965	RRP12	99	63.392	Loxodonta_africana
ENSELUG00000010510	rrp12	91	87.302	ENSMFAG00000041558	RRP12	99	69.540	Macaca_fascicularis
ENSELUG00000010510	rrp12	91	87.302	ENSMMUG00000019634	RRP12	99	69.540	Macaca_mulatta
ENSELUG00000010510	rrp12	91	87.302	ENSMNEG00000036759	RRP12	99	69.540	Macaca_nemestrina
ENSELUG00000010510	rrp12	91	88.889	ENSMLEG00000041317	RRP12	99	60.782	Mandrillus_leucophaeus
ENSELUG00000010510	rrp12	100	78.644	ENSMAMG00000002964	rrp12	99	78.695	Mastacembelus_armatus
ENSELUG00000010510	rrp12	99	77.986	ENSMZEG00005003241	rrp12	99	78.433	Maylandia_zebra
ENSELUG00000010510	rrp12	100	62.258	ENSMGAG00000009829	RRP12	99	60.970	Meleagris_gallopavo
ENSELUG00000010510	rrp12	99	61.617	ENSMAUG00000020743	Rrp12	99	61.617	Mesocricetus_auratus
ENSELUG00000010510	rrp12	92	75.817	ENSMICG00000007624	RRP12	99	69.143	Microcebus_murinus
ENSELUG00000010510	rrp12	100	63.445	ENSMOCG00000006753	Rrp12	99	63.741	Microtus_ochrogaster
ENSELUG00000010510	rrp12	100	74.598	ENSMMOG00000010708	rrp12	99	74.942	Mola_mola
ENSELUG00000010510	rrp12	100	63.406	ENSMODG00000004315	RRP12	99	63.833	Monodelphis_domestica
ENSELUG00000010510	rrp12	99	73.146	ENSMALG00000016560	rrp12	99	77.787	Monopterus_albus
ENSELUG00000010510	rrp12	100	62.991	MGP_CAROLIEiJ_G0022957	Rrp12	99	63.400	Mus_caroli
ENSELUG00000010510	rrp12	100	63.499	ENSMUSG00000035049	Rrp12	99	63.867	Mus_musculus
ENSELUG00000010510	rrp12	100	63.499	MGP_PahariEiJ_G0014447	Rrp12	99	63.867	Mus_pahari
ENSELUG00000010510	rrp12	100	63.667	MGP_SPRETEiJ_G0023878	Rrp12	99	64.022	Mus_spretus
ENSELUG00000010510	rrp12	100	62.605	ENSMPUG00000017046	RRP12	99	63.048	Mustela_putorius_furo
ENSELUG00000010510	rrp12	98	64.671	ENSMLUG00000017160	RRP12	99	63.622	Myotis_lucifugus
ENSELUG00000010510	rrp12	100	63.246	ENSNGAG00000024144	Rrp12	99	63.917	Nannospalax_galili
ENSELUG00000010510	rrp12	99	76.726	ENSNBRG00000009987	rrp12	99	77.132	Neolamprologus_brichardi
ENSELUG00000010510	rrp12	97	69.792	ENSNLEG00000013762	RRP12	99	69.540	Nomascus_leucogenys
ENSELUG00000010510	rrp12	100	59.291	ENSMEUG00000003185	RRP12	99	58.637	Notamacropus_eugenii
ENSELUG00000010510	rrp12	93	67.304	ENSOPRG00000005001	RRP12	94	68.220	Ochotona_princeps
ENSELUG00000010510	rrp12	100	61.864	ENSODEG00000016439	RRP12	99	62.296	Octodon_degus
ENSELUG00000010510	rrp12	99	78.858	ENSONIG00000009528	rrp12	99	79.302	Oreochromis_niloticus
ENSELUG00000010510	rrp12	100	58.514	ENSOANG00000006560	RRP12	99	58.927	Ornithorhynchus_anatinus
ENSELUG00000010510	rrp12	100	62.732	ENSOCUG00000005662	RRP12	99	63.524	Oryctolagus_cuniculus
ENSELUG00000010510	rrp12	100	76.630	ENSORLG00000008688	rrp12	100	77.030	Oryzias_latipes
ENSELUG00000010510	rrp12	100	76.969	ENSORLG00020002355	rrp12	99	77.222	Oryzias_latipes_hni
ENSELUG00000010510	rrp12	100	77.138	ENSORLG00015006709	rrp12	100	77.477	Oryzias_latipes_hsok
ENSELUG00000010510	rrp12	100	77.307	ENSOMEG00000002609	rrp12	99	77.601	Oryzias_melastigma
ENSELUG00000010510	rrp12	98	66.102	ENSOGAG00000001626	RRP12	99	62.903	Otolemur_garnettii
ENSELUG00000010510	rrp12	100	62.521	ENSOARG00000009681	RRP12	99	62.260	Ovis_aries
ENSELUG00000010510	rrp12	97	69.792	ENSPPAG00000043885	RRP12	99	69.540	Pan_paniscus
ENSELUG00000010510	rrp12	97	68.391	ENSPPRG00000002029	RRP12	99	68.391	Panthera_pardus
ENSELUG00000010510	rrp12	97	68.966	ENSPTIG00000004428	RRP12	99	68.966	Panthera_tigris_altaica
ENSELUG00000010510	rrp12	97	69.792	ENSPTRG00000002806	RRP12	99	69.540	Pan_troglodytes
ENSELUG00000010510	rrp12	91	88.889	ENSPANG00000021360	RRP12	99	69.540	Papio_anubis
ENSELUG00000010510	rrp12	99	72.358	ENSPKIG00000016516	rrp12	99	71.914	Paramormyrops_kingsleyae
ENSELUG00000010510	rrp12	100	75.360	ENSPMGG00000020217	rrp12	99	75.851	Periophthalmus_magnuspinnatus
ENSELUG00000010510	rrp12	100	63.896	ENSPEMG00000008437	Rrp12	99	64.049	Peromyscus_maniculatus_bairdii
ENSELUG00000010510	rrp12	79	65.574	ENSPMAG00000007493	rrp12	82	55.119	Petromyzon_marinus
ENSELUG00000010510	rrp12	98	77.727	ENSPCIG00000002157	RRP12	96	75.503	Phascolarctos_cinereus
ENSELUG00000010510	rrp12	100	77.477	ENSPFOG00000014975	rrp12	99	77.459	Poecilia_formosa
ENSELUG00000010510	rrp12	100	77.327	ENSPLAG00000009840	rrp12	99	77.304	Poecilia_latipinna
ENSELUG00000010510	rrp12	100	77.561	ENSPMEG00000021871	rrp12	99	77.537	Poecilia_mexicana
ENSELUG00000010510	rrp12	100	74.874	ENSPREG00000020950	rrp12	99	75.212	Poecilia_reticulata
ENSELUG00000010510	rrp12	100	62.888	ENSPPYG00000002528	RRP12	99	63.000	Pongo_abelii
ENSELUG00000010510	rrp12	94	84.848	ENSPCAG00000008967	RRP12	94	78.531	Procavia_capensis
ENSELUG00000010510	rrp12	92	82.432	ENSPCOG00000014009	RRP12	99	69.540	Propithecus_coquereli
ENSELUG00000010510	rrp12	100	60.050	ENSPVAG00000003370	RRP12	99	60.893	Pteropus_vampyrus
ENSELUG00000010510	rrp12	99	78.413	ENSPNYG00000009451	rrp12	99	78.821	Pundamilia_nyererei
ENSELUG00000010510	rrp12	99	73.957	ENSPNAG00000007658	rrp12	99	74.186	Pygocentrus_nattereri
ENSELUG00000010510	rrp12	100	63.636	ENSRNOG00000048495	Rrp12	99	63.840	Rattus_norvegicus
ENSELUG00000010510	rrp12	97	71.765	ENSRBIG00000021296	RRP12	99	70.115	Rhinopithecus_bieti
ENSELUG00000010510	rrp12	97	71.765	ENSRROG00000032482	RRP12	99	70.115	Rhinopithecus_roxellana
ENSELUG00000010510	rrp12	92	83.784	ENSSBOG00000030992	RRP12	100	75.658	Saimiri_boliviensis_boliviensis
ENSELUG00000010510	rrp12	100	62.384	ENSSHAG00000018275	RRP12	99	63.207	Sarcophilus_harrisii
ENSELUG00000010510	rrp12	99	75.021	ENSSFOG00015016400	rrp12	99	74.554	Scleropages_formosus
ENSELUG00000010510	rrp12	100	77.712	ENSSMAG00000004047	rrp12	99	78.760	Scophthalmus_maximus
ENSELUG00000010510	rrp12	100	78.934	ENSSDUG00000022871	rrp12	99	79.086	Seriola_dumerili
ENSELUG00000010510	rrp12	100	78.934	ENSSLDG00000003038	rrp12	99	79.086	Seriola_lalandi_dorsalis
ENSELUG00000010510	rrp12	99	61.840	ENSSPUG00000012221	RRP12	99	61.253	Sphenodon_punctatus
ENSELUG00000010510	rrp12	100	79.086	ENSSPAG00000002261	rrp12	99	79.628	Stegastes_partitus
ENSELUG00000010510	rrp12	99	62.763	ENSSSCG00000010514	RRP12	99	62.943	Sus_scrofa
ENSELUG00000010510	rrp12	94	59.839	ENSTGUG00000009711	RRP12	99	59.983	Taeniopygia_guttata
ENSELUG00000010510	rrp12	100	71.949	ENSTRUG00000012017	rrp12	99	72.558	Takifugu_rubripes
ENSELUG00000010510	rrp12	100	76.291	ENSTNIG00000016522	rrp12	99	76.434	Tetraodon_nigroviridis
ENSELUG00000010510	rrp12	80	79.769	ENSTBEG00000004907	RRP12	80	76.471	Tupaia_belangeri
ENSELUG00000010510	rrp12	99	60.591	ENSTTRG00000009878	RRP12	99	61.343	Tursiops_truncatus
ENSELUG00000010510	rrp12	100	63.507	ENSUAMG00000009092	RRP12	99	63.825	Ursus_americanus
ENSELUG00000010510	rrp12	100	62.385	ENSUMAG00000021621	RRP12	99	62.000	Ursus_maritimus
ENSELUG00000010510	rrp12	97	69.444	ENSVVUG00000023168	RRP12	99	63.566	Vulpes_vulpes
ENSELUG00000010510	rrp12	100	64.226	ENSXETG00000003430	rrp12	99	64.715	Xenopus_tropicalis
ENSELUG00000010510	rrp12	98	75.082	ENSXCOG00000012082	rrp12	99	76.877	Xiphophorus_couchianus
ENSELUG00000010510	rrp12	100	77.392	ENSXMAG00000013498	rrp12	99	77.364	Xiphophorus_maculatus