EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000010546 (Gene tree)
Gene ID: 105029660
Gene Symbol: si:ch211-256m1.8
Alias: -
Full Name: uncharacterized LOC105029660
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 15926 bases
Position: chrLG11:18306340-18322265
Accession: 105029660
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000032599	tRNA-synt_2	PF00152.20	2.1e-27	1	1
ENSELUP00000032604	tRNA-synt_2	PF00152.20	2.1e-27	1	1
ENSELUP00000032607	tRNA-synt_2	PF00152.20	2.1e-27	1	1
ENSELUP00000010039	tRNA-synt_2	PF00152.20	2.1e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000002813	-	5973	-	ENSELUP00000032599	1594 (aa)	-	UPI000575E7D5
ENSELUT00000002806	-	6052	-	ENSELUP00000032607	1594 (aa)	-	UPI000575E7D5
ENSELUT00000002818	-	6736	XM_020051091	ENSELUP00000032604	1594 (aa)	XP_019906650	UPI000575E7D5
ENSELUT00000002803	-	6466	-	ENSELUP00000010039	1615 (aa)	-	-

Gene Model

Click here to download ENSELUG00000010546's gene model file

Pathways

Pathway ID	Pathway Name	Source
els00250	Alanine, aspartate and glutamate metabolism	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000010546's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000010546	si:ch211-256m1.8	100	69.086	ENSAPOG00000007012	si:ch211-256m1.8	100	69.086	Acanthochromis_polyacanthus
ENSELUG00000010546	si:ch211-256m1.8	100	69.019	ENSAOCG00000012258	si:ch211-256m1.8	100	69.019	Amphiprion_ocellaris
ENSELUG00000010546	si:ch211-256m1.8	100	68.832	ENSAPEG00000002724	si:ch211-256m1.8	100	68.832	Amphiprion_percula
ENSELUG00000010546	si:ch211-256m1.8	100	71.169	ENSATEG00000006278	si:ch211-256m1.8	100	71.169	Anabas_testudineus
ENSELUG00000010546	si:ch211-256m1.8	100	71.509	ENSACLG00000011503	si:ch211-256m1.8	100	71.509	Astatotilapia_calliptera
ENSELUG00000010546	si:ch211-256m1.8	100	70.990	ENSAMXG00000038245	si:ch211-256m1.8	100	70.990	Astyanax_mexicanus
ENSELUG00000010546	si:ch211-256m1.8	100	68.817	ENSCSEG00000006255	si:ch211-256m1.8	100	68.817	Cynoglossus_semilaevis
ENSELUG00000010546	si:ch211-256m1.8	100	67.830	ENSCVAG00000003376	si:ch211-256m1.8	100	67.830	Cyprinodon_variegatus
ENSELUG00000010546	si:ch211-256m1.8	100	68.797	ENSDARG00000055172	si:ch211-256m1.8	100	68.797	Danio_rerio
ENSELUG00000010546	si:ch211-256m1.8	100	66.708	ENSFHEG00000005847	si:ch211-256m1.8	100	66.708	Fundulus_heteroclitus
ENSELUG00000010546	si:ch211-256m1.8	100	68.128	ENSGAFG00000010269	si:ch211-256m1.8	100	68.128	Gambusia_affinis
ENSELUG00000010546	si:ch211-256m1.8	100	71.572	ENSHBUG00000014407	si:ch211-256m1.8	100	71.572	Haplochromis_burtoni
ENSELUG00000010546	si:ch211-256m1.8	100	66.604	ENSHCOG00000006884	si:ch211-256m1.8	100	68.268	Hippocampus_comes
ENSELUG00000010546	si:ch211-256m1.8	100	69.125	ENSIPUG00000022659	si:ch211-256m1.8	100	69.125	Ictalurus_punctatus
ENSELUG00000010546	si:ch211-256m1.8	100	70.356	ENSKMAG00000016377	si:ch211-256m1.8	100	70.356	Kryptolebias_marmoratus
ENSELUG00000010546	si:ch211-256m1.8	100	71.044	ENSLBEG00000010639	si:ch211-256m1.8	100	71.044	Labrus_bergylta
ENSELUG00000010546	si:ch211-256m1.8	100	62.118	ENSLOCG00000011127	si:ch211-256m1.8	100	62.118	Lepisosteus_oculatus
ENSELUG00000010546	si:ch211-256m1.8	99	70.031	ENSMAMG00000005651	si:ch211-256m1.8	99	70.031	Mastacembelus_armatus
ENSELUG00000010546	si:ch211-256m1.8	100	71.446	ENSMZEG00005006924	si:ch211-256m1.8	100	71.446	Maylandia_zebra
ENSELUG00000010546	si:ch211-256m1.8	100	67.270	ENSMMOG00000001736	si:ch211-256m1.8	100	67.270	Mola_mola
ENSELUG00000010546	si:ch211-256m1.8	100	71.384	ENSNBRG00000005143	si:ch211-256m1.8	100	71.384	Neolamprologus_brichardi
ENSELUG00000010546	si:ch211-256m1.8	100	68.543	ENSORLG00000022248	si:ch211-256m1.8	100	68.543	Oryzias_latipes
ENSELUG00000010546	si:ch211-256m1.8	100	68.168	ENSORLG00020000214	si:ch211-256m1.8	100	68.168	Oryzias_latipes_hni
ENSELUG00000010546	si:ch211-256m1.8	100	68.523	ENSORLG00015020297	si:ch211-256m1.8	100	68.710	Oryzias_latipes_hsok
ENSELUG00000010546	si:ch211-256m1.8	100	68.043	ENSOMEG00000004519	si:ch211-256m1.8	100	68.447	Oryzias_melastigma
ENSELUG00000010546	si:ch211-256m1.8	96	69.391	ENSPKIG00000007399	si:ch211-256m1.8	100	69.391	Paramormyrops_kingsleyae
ENSELUG00000010546	si:ch211-256m1.8	100	62.078	ENSPMGG00000007698	si:ch211-256m1.8	100	62.078	Periophthalmus_magnuspinnatus
ENSELUG00000010546	si:ch211-256m1.8	100	68.358	ENSPFOG00000005178	si:ch211-256m1.8	100	68.358	Poecilia_formosa
ENSELUG00000010546	si:ch211-256m1.8	100	68.253	ENSPLAG00000006872	si:ch211-256m1.8	100	68.253	Poecilia_latipinna
ENSELUG00000010546	si:ch211-256m1.8	100	68.358	ENSPMEG00000021815	si:ch211-256m1.8	100	68.358	Poecilia_mexicana
ENSELUG00000010546	si:ch211-256m1.8	100	68.316	ENSPREG00000018669	si:ch211-256m1.8	100	68.316	Poecilia_reticulata
ENSELUG00000010546	si:ch211-256m1.8	100	71.446	ENSPNYG00000018038	si:ch211-256m1.8	100	71.446	Pundamilia_nyererei
ENSELUG00000010546	si:ch211-256m1.8	99	69.756	ENSPNAG00000003552	si:ch211-256m1.8	99	69.756	Pygocentrus_nattereri
ENSELUG00000010546	si:ch211-256m1.8	99	68.523	ENSPNAG00000018965	-	99	68.523	Pygocentrus_nattereri
ENSELUG00000010546	si:ch211-256m1.8	100	67.732	ENSSFOG00015008344	si:ch211-256m1.8	100	67.732	Scleropages_formosus
ENSELUG00000010546	si:ch211-256m1.8	100	70.732	ENSSMAG00000007562	si:ch211-256m1.8	100	70.732	Scophthalmus_maximus
ENSELUG00000010546	si:ch211-256m1.8	100	72.670	ENSSDUG00000018180	si:ch211-256m1.8	100	72.670	Seriola_dumerili
ENSELUG00000010546	si:ch211-256m1.8	100	72.670	ENSSLDG00000020310	si:ch211-256m1.8	100	72.670	Seriola_lalandi_dorsalis
ENSELUG00000010546	si:ch211-256m1.8	100	69.457	ENSSPAG00000013419	si:ch211-256m1.8	100	69.457	Stegastes_partitus
ENSELUG00000010546	si:ch211-256m1.8	100	63.750	ENSTRUG00000023803	si:ch211-256m1.8	100	63.750	Takifugu_rubripes
ENSELUG00000010546	si:ch211-256m1.8	100	68.352	ENSXCOG00000017726	si:ch211-256m1.8	100	68.352	Xiphophorus_couchianus
ENSELUG00000010546	si:ch211-256m1.8	100	68.477	ENSXMAG00000026576	si:ch211-256m1.8	100	68.477	Xiphophorus_maculatus