EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000010642 (Gene tree)
Gene ID: 105031426
Gene Symbol: tarbp2
Alias: fj51e12|wu:fj51e12|zgc:63778
Full Name: TARBP2%2C RISC loading complex RNA binding subunit
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 25989 bases
Position: chrAZJR03001029.1:913984-939972
Accession: 105031426
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000010123	dsrm	PF00035.26	8.6e-35	1	2
ENSELUP00000010123	dsrm	PF00035.26	8.6e-35	2	2
ENSELUP00000010123	DND1_DSRM	PF14709.7	8.6e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000002652	-	1694	XM_010905841	ENSELUP00000010123	347 (aa)	XP_010904143	UPI00057726FD

Gene Model

Click here to download ENSELUG00000010642's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000010642's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000010642	tarbp2	97	43.452	ENSELUG00000023321	prkra	95	43.284

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000010642	tarbp2	96	67.045	ENSG00000139546	TARBP2	100	67.246	Homo_sapiens
ENSELUG00000010642	tarbp2	100	87.931	ENSAPOG00000019892	tarbp2	100	86.782	Acanthochromis_polyacanthus
ENSELUG00000010642	tarbp2	96	67.898	ENSAMEG00000012601	TARBP2	96	67.898	Ailuropoda_melanoleuca
ENSELUG00000010642	tarbp2	100	86.782	ENSACIG00000016780	tarbp2	100	83.523	Amphilophus_citrinellus
ENSELUG00000010642	tarbp2	100	87.644	ENSAOCG00000005201	tarbp2	100	86.494	Amphiprion_ocellaris
ENSELUG00000010642	tarbp2	100	87.644	ENSAPEG00000008376	tarbp2	100	86.494	Amphiprion_percula
ENSELUG00000010642	tarbp2	100	86.207	ENSATEG00000025012	tarbp2	100	85.345	Anabas_testudineus
ENSELUG00000010642	tarbp2	96	69.774	ENSACAG00000001100	TARBP2	96	69.164	Anolis_carolinensis
ENSELUG00000010642	tarbp2	96	67.045	ENSANAG00000034453	TARBP2	76	90.000	Aotus_nancymaae
ENSELUG00000010642	tarbp2	97	86.095	ENSACLG00000018569	tarbp2	97	83.728	Astatotilapia_calliptera
ENSELUG00000010642	tarbp2	100	85.303	ENSAMXG00000016665	tarbp2	100	84.726	Astyanax_mexicanus
ENSELUG00000010642	tarbp2	96	67.898	ENSBTAG00000000435	TARBP2	96	67.898	Bos_taurus
ENSELUG00000010642	tarbp2	96	67.045	ENSCJAG00000018668	TARBP2	96	67.330	Callithrix_jacchus
ENSELUG00000010642	tarbp2	96	70.238	ENSCAFG00000006874	TARBP2	96	69.643	Canis_familiaris
ENSELUG00000010642	tarbp2	96	67.330	ENSCAFG00020020735	TARBP2	100	67.246	Canis_lupus_dingo
ENSELUG00000010642	tarbp2	96	67.135	ENSCHIG00000026017	TARBP2	96	67.416	Capra_hircus
ENSELUG00000010642	tarbp2	96	68.079	ENSTSYG00000035683	TARBP2	76	90.000	Carlito_syrichta
ENSELUG00000010642	tarbp2	64	69.778	ENSCAPG00000008981	TARBP2	93	72.381	Cavia_aperea
ENSELUG00000010642	tarbp2	96	66.947	ENSCPOG00000001009	TARBP2	96	67.330	Cavia_porcellus
ENSELUG00000010642	tarbp2	97	66.573	ENSCCAG00000033025	TARBP2	91	92.453	Cebus_capucinus
ENSELUG00000010642	tarbp2	96	67.045	ENSCATG00000026344	TARBP2	76	90.000	Cercocebus_atys
ENSELUG00000010642	tarbp2	96	67.045	ENSCLAG00000009175	TARBP2	96	67.045	Chinchilla_lanigera
ENSELUG00000010642	tarbp2	96	67.330	ENSCSAG00000005479	TARBP2	96	67.330	Chlorocebus_sabaeus
ENSELUG00000010642	tarbp2	100	67.397	ENSCPBG00000000654	TARBP2	100	69.322	Chrysemys_picta_bellii
ENSELUG00000010642	tarbp2	100	64.754	ENSCANG00000040415	TARBP2	91	90.566	Colobus_angolensis_palliatus
ENSELUG00000010642	tarbp2	96	67.236	ENSCGRG00001011856	TARBP2	96	67.236	Cricetulus_griseus_chok1gshd
ENSELUG00000010642	tarbp2	96	67.236	ENSCGRG00000009088	TARBP2	100	66.255	Cricetulus_griseus_crigri
ENSELUG00000010642	tarbp2	100	85.345	ENSCSEG00000010631	tarbp2	100	83.621	Cynoglossus_semilaevis
ENSELUG00000010642	tarbp2	100	85.632	ENSCVAG00000009832	tarbp2	100	84.195	Cyprinodon_variegatus
ENSELUG00000010642	tarbp2	100	83.143	ENSDARG00000070471	tarbp2	100	82.571	Danio_rerio
ENSELUG00000010642	tarbp2	96	67.614	ENSDNOG00000002144	TARBP2	96	67.330	Dasypus_novemcinctus
ENSELUG00000010642	tarbp2	65	68.996	ENSDORG00000001390	Tarbp2	86	72.381	Dipodomys_ordii
ENSELUG00000010642	tarbp2	81	91.667	ENSETEG00000002458	TARBP2	73	90.769	Echinops_telfairi
ENSELUG00000010642	tarbp2	95	56.839	ENSEBUG00000002377	tarbp2	98	57.751	Eptatretus_burgeri
ENSELUG00000010642	tarbp2	96	67.614	ENSEASG00005010030	TARBP2	96	67.898	Equus_asinus_asinus
ENSELUG00000010642	tarbp2	96	70.833	ENSECAG00000011695	TARBP2	96	70.833	Equus_caballus
ENSELUG00000010642	tarbp2	80	64.765	ENSEEUG00000001128	-	95	64.765	Erinaceus_europaeus
ENSELUG00000010642	tarbp2	96	67.416	ENSFCAG00000007757	TARBP2	96	67.898	Felis_catus
ENSELUG00000010642	tarbp2	96	66.387	ENSFDAG00000011932	TARBP2	100	65.984	Fukomys_damarensis
ENSELUG00000010642	tarbp2	94	88.450	ENSFHEG00000016118	tarbp2	100	86.544	Fundulus_heteroclitus
ENSELUG00000010642	tarbp2	100	84.900	ENSGMOG00000001290	tarbp2	100	83.714	Gadus_morhua
ENSELUG00000010642	tarbp2	60	76.077	ENSGALG00000038939	-	78	75.845	Gallus_gallus
ENSELUG00000010642	tarbp2	100	87.679	ENSGAFG00000013341	tarbp2	100	85.920	Gambusia_affinis
ENSELUG00000010642	tarbp2	100	82.353	ENSGACG00000006645	tarbp2	100	81.513	Gasterosteus_aculeatus
ENSELUG00000010642	tarbp2	100	67.945	ENSGAGG00000021169	TARBP2	100	67.500	Gopherus_agassizii
ENSELUG00000010642	tarbp2	97	66.573	ENSGGOG00000012637	TARBP2	81	85.938	Gorilla_gorilla
ENSELUG00000010642	tarbp2	100	86.494	ENSHBUG00000018639	tarbp2	100	84.195	Haplochromis_burtoni
ENSELUG00000010642	tarbp2	96	67.330	ENSHGLG00000001284	TARBP2	96	67.330	Heterocephalus_glaber_female
ENSELUG00000010642	tarbp2	96	67.330	ENSHGLG00100011274	TARBP2	96	67.330	Heterocephalus_glaber_male
ENSELUG00000010642	tarbp2	100	83.095	ENSHCOG00000001027	tarbp2	100	80.747	Hippocampus_comes
ENSELUG00000010642	tarbp2	100	84.375	ENSIPUG00000023701	tarbp2	100	83.429	Ictalurus_punctatus
ENSELUG00000010642	tarbp2	97	66.854	ENSSTOG00000003678	TARBP2	100	65.984	Ictidomys_tridecemlineatus
ENSELUG00000010642	tarbp2	100	87.931	ENSKMAG00000012142	tarbp2	100	86.207	Kryptolebias_marmoratus
ENSELUG00000010642	tarbp2	100	84.594	ENSLBEG00000015027	tarbp2	100	83.754	Labrus_bergylta
ENSELUG00000010642	tarbp2	95	65.152	ENSLACG00000007087	TARBP2	60	76.500	Latimeria_chalumnae
ENSELUG00000010642	tarbp2	100	80.682	ENSLOCG00000005711	tarbp2	100	80.403	Lepisosteus_oculatus
ENSELUG00000010642	tarbp2	73	61.397	ENSLAFG00000002620	TARBP2	95	61.194	Loxodonta_africana
ENSELUG00000010642	tarbp2	96	67.045	ENSMFAG00000013567	TARBP2	76	90.000	Macaca_fascicularis
ENSELUG00000010642	tarbp2	96	67.330	ENSMMUG00000018492	TARBP2	96	67.614	Macaca_mulatta
ENSELUG00000010642	tarbp2	96	67.045	ENSMNEG00000036477	TARBP2	76	90.000	Macaca_nemestrina
ENSELUG00000010642	tarbp2	96	67.262	ENSMLEG00000029583	TARBP2	76	90.000	Mandrillus_leucophaeus
ENSELUG00000010642	tarbp2	95	86.061	ENSMAMG00000010272	tarbp2	97	82.558	Mastacembelus_armatus
ENSELUG00000010642	tarbp2	100	86.782	ENSMZEG00005006895	tarbp2	100	84.483	Maylandia_zebra
ENSELUG00000010642	tarbp2	96	67.236	ENSMAUG00000019805	Tarbp2	96	66.952	Mesocricetus_auratus
ENSELUG00000010642	tarbp2	94	67.536	ENSMICG00000027441	TARBP2	100	67.536	Microcebus_murinus
ENSELUG00000010642	tarbp2	96	67.806	ENSMOCG00000003691	Tarbp2	96	67.521	Microtus_ochrogaster
ENSELUG00000010642	tarbp2	94	85.843	ENSMMOG00000010374	tarbp2	100	84.195	Mola_mola
ENSELUG00000010642	tarbp2	100	87.069	ENSMALG00000009773	tarbp2	100	85.345	Monopterus_albus
ENSELUG00000010642	tarbp2	96	66.952	MGP_CAROLIEiJ_G0020356	Tarbp2	91	92.453	Mus_caroli
ENSELUG00000010642	tarbp2	96	66.952	ENSMUSG00000023051	Tarbp2	91	92.453	Mus_musculus
ENSELUG00000010642	tarbp2	96	66.667	MGP_PahariEiJ_G0020355	Tarbp2	91	92.453	Mus_pahari
ENSELUG00000010642	tarbp2	96	66.952	MGP_SPRETEiJ_G0021249	Tarbp2	91	92.453	Mus_spretus
ENSELUG00000010642	tarbp2	96	68.091	ENSMPUG00000005944	TARBP2	96	67.521	Mustela_putorius_furo
ENSELUG00000010642	tarbp2	96	67.898	ENSMLUG00000010035	TARBP2	96	68.182	Myotis_lucifugus
ENSELUG00000010642	tarbp2	96	67.045	ENSNLEG00000017690	TARBP2	76	90.000	Nomascus_leucogenys
ENSELUG00000010642	tarbp2	96	72.372	ENSMEUG00000001916	TARBP2	96	71.171	Notamacropus_eugenii
ENSELUG00000010642	tarbp2	64	70.667	ENSOPRG00000011397	TARBP2	100	70.667	Ochotona_princeps
ENSELUG00000010642	tarbp2	61	68.142	ENSODEG00000013413	TARBP2	100	68.142	Octodon_degus
ENSELUG00000010642	tarbp2	95	83.191	ENSONIG00000005115	tarbp2	98	79.070	Oreochromis_niloticus
ENSELUG00000010642	tarbp2	96	68.466	ENSOCUG00000005700	TARBP2	96	67.898	Oryctolagus_cuniculus
ENSELUG00000010642	tarbp2	100	84.770	ENSORLG00000005209	tarbp2	100	83.046	Oryzias_latipes
ENSELUG00000010642	tarbp2	100	84.770	ENSORLG00020017755	tarbp2	100	83.046	Oryzias_latipes_hni
ENSELUG00000010642	tarbp2	100	84.770	ENSORLG00015013237	tarbp2	100	83.046	Oryzias_latipes_hsok
ENSELUG00000010642	tarbp2	100	85.057	ENSOMEG00000018860	tarbp2	100	83.621	Oryzias_melastigma
ENSELUG00000010642	tarbp2	96	67.045	ENSOGAG00000001744	TARBP2	96	67.045	Otolemur_garnettii
ENSELUG00000010642	tarbp2	96	67.614	ENSOARG00000016437	TARBP2	96	67.614	Ovis_aries
ENSELUG00000010642	tarbp2	96	67.045	ENSPPAG00000030429	TARBP2	76	90.000	Pan_paniscus
ENSELUG00000010642	tarbp2	96	66.947	ENSPPRG00000000189	TARBP2	96	67.614	Panthera_pardus
ENSELUG00000010642	tarbp2	96	69.971	ENSPTIG00000007859	TARBP2	96	69.971	Panthera_tigris_altaica
ENSELUG00000010642	tarbp2	96	67.045	ENSPTRG00000005020	TARBP2	76	90.000	Pan_troglodytes
ENSELUG00000010642	tarbp2	96	67.045	ENSPANG00000010689	TARBP2	76	90.000	Papio_anubis
ENSELUG00000010642	tarbp2	100	80.726	ENSPKIG00000002455	tarbp2	100	80.112	Paramormyrops_kingsleyae
ENSELUG00000010642	tarbp2	100	86.207	ENSPMGG00000006497	tarbp2	100	84.195	Periophthalmus_magnuspinnatus
ENSELUG00000010642	tarbp2	96	66.382	ENSPEMG00000014285	Tarbp2	96	66.382	Peromyscus_maniculatus_bairdii
ENSELUG00000010642	tarbp2	93	62.154	ENSPMAG00000000105	tarbp2	99	61.801	Petromyzon_marinus
ENSELUG00000010642	tarbp2	96	72.372	ENSPCIG00000006672	TARBP2	89	71.171	Phascolarctos_cinereus
ENSELUG00000010642	tarbp2	100	87.966	ENSPFOG00000007586	tarbp2	100	86.207	Poecilia_formosa
ENSELUG00000010642	tarbp2	100	87.966	ENSPLAG00000017659	tarbp2	100	86.207	Poecilia_latipinna
ENSELUG00000010642	tarbp2	100	87.966	ENSPMEG00000007775	tarbp2	100	86.207	Poecilia_mexicana
ENSELUG00000010642	tarbp2	100	87.393	ENSPREG00000007815	tarbp2	100	85.632	Poecilia_reticulata
ENSELUG00000010642	tarbp2	97	66.176	ENSPPYG00000004583	TARBP2	97	66.471	Pongo_abelii
ENSELUG00000010642	tarbp2	78	63.230	ENSPCAG00000005352	TARBP2	57	73.810	Procavia_capensis
ENSELUG00000010642	tarbp2	96	67.614	ENSPCOG00000013102	TARBP2	76	90.000	Propithecus_coquereli
ENSELUG00000010642	tarbp2	96	67.045	ENSPVAG00000012286	TARBP2	96	67.045	Pteropus_vampyrus
ENSELUG00000010642	tarbp2	100	86.494	ENSPNYG00000014125	tarbp2	100	84.195	Pundamilia_nyererei
ENSELUG00000010642	tarbp2	100	86.744	ENSPNAG00000011128	tarbp2	100	86.167	Pygocentrus_nattereri
ENSELUG00000010642	tarbp2	96	66.382	ENSRNOG00000042355	Tarbp2	96	66.667	Rattus_norvegicus
ENSELUG00000010642	tarbp2	96	67.045	ENSRBIG00000027150	TARBP2	76	90.000	Rhinopithecus_bieti
ENSELUG00000010642	tarbp2	96	67.045	ENSRROG00000044783	TARBP2	100	67.246	Rhinopithecus_roxellana
ENSELUG00000010642	tarbp2	96	67.045	ENSSBOG00000027305	TARBP2	76	90.000	Saimiri_boliviensis_boliviensis
ENSELUG00000010642	tarbp2	94	72.086	ENSSHAG00000007064	TARBP2	100	71.166	Sarcophilus_harrisii
ENSELUG00000010642	tarbp2	100	80.387	ENSSFOG00015010784	tarbp2	100	79.944	Scleropages_formosus
ENSELUG00000010642	tarbp2	100	85.876	ENSSMAG00000012769	tarbp2	100	85.028	Scophthalmus_maximus
ENSELUG00000010642	tarbp2	100	86.782	ENSSDUG00000018818	tarbp2	100	85.632	Seriola_dumerili
ENSELUG00000010642	tarbp2	100	86.782	ENSSLDG00000001835	tarbp2	100	85.345	Seriola_lalandi_dorsalis
ENSELUG00000010642	tarbp2	75	68.657	ENSSARG00000001010	TARBP2	73	68.657	Sorex_araneus
ENSELUG00000010642	tarbp2	98	50.877	ENSSPUG00000005895	TARBP2	70	78.261	Sphenodon_punctatus
ENSELUG00000010642	tarbp2	100	88.218	ENSSPAG00000022797	tarbp2	100	86.207	Stegastes_partitus
ENSELUG00000010642	tarbp2	96	67.614	ENSSSCG00000000276	TARBP2	100	67.536	Sus_scrofa
ENSELUG00000010642	tarbp2	71	56.226	ENSTGUG00000017031	TARBP2	70	80.328	Taeniopygia_guttata
ENSELUG00000010642	tarbp2	100	85.920	ENSTRUG00000014379	tarbp2	100	84.770	Takifugu_rubripes
ENSELUG00000010642	tarbp2	100	84.483	ENSTNIG00000007065	tarbp2	100	83.333	Tetraodon_nigroviridis
ENSELUG00000010642	tarbp2	96	68.182	ENSTTRG00000017177	TARBP2	96	68.182	Tursiops_truncatus
ENSELUG00000010642	tarbp2	96	67.898	ENSUAMG00000009011	TARBP2	96	68.182	Ursus_americanus
ENSELUG00000010642	tarbp2	96	67.330	ENSUMAG00000010461	TARBP2	96	67.614	Ursus_maritimus
ENSELUG00000010642	tarbp2	96	67.330	ENSVVUG00000028150	TARBP2	100	67.246	Vulpes_vulpes
ENSELUG00000010642	tarbp2	98	70.141	ENSXETG00000012644	tarbp2	99	68.466	Xenopus_tropicalis
ENSELUG00000010642	tarbp2	100	88.539	ENSXMAG00000017836	tarbp2	100	86.494	Xiphophorus_maculatus