EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000010733 (Gene tree)
Gene ID: 105028101
Gene Symbol: hnrnpub
Alias: hnrnpu|hnrpu|wu:fa66f11|wu:fc18b08|wu:fi89c08|zgc:111835|zgc:136480
Full Name: heterogeneous nuclear ribonucleoprotein U
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 15382 bases
Position: chrLG18:6975640-6991021
Accession: 105028101
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000032736	SAP	PF02037.27	3.8e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000002465	-	6315	XM_010900605	ENSELUP00000032736	845 (aa)	XP_010898907	UPI000577B96A

Gene Model

Click here to download ENSELUG00000010733's gene model file

Pathways

Pathway ID	Pathway Name	Source
els03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000010733's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000010733	hnrnpub	78	30.792	ENSELUG00000008134	si:ch211-107m4.1	74	32.985
ENSELUG00000010733	hnrnpub	93	51.282	ENSELUG00000019520	HNRNPUL1	82	46.914
ENSELUG00000010733	hnrnpub	100	56.491	ENSELUG00000011966	hnrnpua	98	69.772
ENSELUG00000010733	hnrnpub	57	50.823	ENSELUG00000021668	-	51	67.391

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000010733	hnrnpub	68	62.270	ENSG00000153187	HNRNPU	99	67.667	Homo_sapiens
ENSELUG00000010733	hnrnpub	100	72.164	ENSAPOG00000017400	hnrnpub	100	72.865	Acanthochromis_polyacanthus
ENSELUG00000010733	hnrnpub	62	65.876	ENSAMEG00000009145	HNRNPU	71	58.211	Ailuropoda_melanoleuca
ENSELUG00000010733	hnrnpub	87	74.830	ENSACIG00000012138	hnrnpub	100	72.207	Amphilophus_citrinellus
ENSELUG00000010733	hnrnpub	100	74.235	ENSAOCG00000015843	hnrnpub	100	73.225	Amphiprion_ocellaris
ENSELUG00000010733	hnrnpub	100	74.235	ENSAPEG00000014679	hnrnpub	100	73.225	Amphiprion_percula
ENSELUG00000010733	hnrnpub	87	78.562	ENSATEG00000016178	hnrnpub	97	73.678	Anabas_testudineus
ENSELUG00000010733	hnrnpub	87	70.833	ENSACAG00000004511	HNRNPU	80	62.500	Anolis_carolinensis
ENSELUG00000010733	hnrnpub	82	57.293	ENSANAG00000033895	-	98	57.766	Aotus_nancymaae
ENSELUG00000010733	hnrnpub	100	72.706	ENSACLG00000008165	hnrnpub	100	72.695	Astatotilapia_calliptera
ENSELUG00000010733	hnrnpub	68	62.104	ENSBTAG00000007606	HNRNPU	70	62.957	Bos_taurus
ENSELUG00000010733	hnrnpub	63	65.162	ENSCJAG00000016914	HNRNPU	98	57.766	Callithrix_jacchus
ENSELUG00000010733	hnrnpub	77	65.814	ENSCAFG00020000918	HNRNPU	70	62.957	Canis_lupus_dingo
ENSELUG00000010733	hnrnpub	68	62.333	ENSCHIG00000004900	HNRNPU	70	62.957	Capra_hircus
ENSELUG00000010733	hnrnpub	62	65.996	ENSCPOG00000011887	HNRNPU	73	57.632	Cavia_porcellus
ENSELUG00000010733	hnrnpub	82	57.162	ENSCCAG00000037859	-	98	57.629	Cebus_capucinus
ENSELUG00000010733	hnrnpub	88	54.424	ENSCATG00000035273	HNRNPU	98	58.038	Cercocebus_atys
ENSELUG00000010733	hnrnpub	62	65.996	ENSCLAG00000007100	HNRNPU	73	57.632	Chinchilla_lanigera
ENSELUG00000010733	hnrnpub	82	56.533	ENSCSAG00000009219	HNRNPU	76	56.941	Chlorocebus_sabaeus
ENSELUG00000010733	hnrnpub	85	76.087	ENSCHOG00000001387	HNRNPU	76	76.087	Choloepus_hoffmanni
ENSELUG00000010733	hnrnpub	86	61.165	ENSCPBG00000009415	HNRNPU	77	67.164	Chrysemys_picta_bellii
ENSELUG00000010733	hnrnpub	68	76.087	ENSCANG00000022780	HNRNPU	99	57.200	Colobus_angolensis_palliatus
ENSELUG00000010733	hnrnpub	82	56.842	ENSCGRG00001020525	Hnrnpu	76	57.347	Cricetulus_griseus_chok1gshd
ENSELUG00000010733	hnrnpub	100	68.973	ENSCSEG00000010804	hnrnpub	100	69.861	Cynoglossus_semilaevis
ENSELUG00000010733	hnrnpub	91	66.079	ENSCVAG00000004280	hnrnpub	100	64.480	Cyprinodon_variegatus
ENSELUG00000010733	hnrnpub	100	60.070	ENSDARG00000004735	hnrnpub	100	59.953	Danio_rerio
ENSELUG00000010733	hnrnpub	100	59.740	ENSDARG00000015206	hnrnpua	100	58.422	Danio_rerio
ENSELUG00000010733	hnrnpub	68	73.469	ENSDNOG00000000215	HNRNPU	87	73.469	Dasypus_novemcinctus
ENSELUG00000010733	hnrnpub	62	65.814	ENSDORG00000015491	Hnrnpu	74	58.321	Dipodomys_ordii
ENSELUG00000010733	hnrnpub	97	55.527	ENSETEG00000014565	HNRNPU	78	76.087	Echinops_telfairi
ENSELUG00000010733	hnrnpub	63	65.233	ENSEASG00005003017	HNRNPU	75	57.407	Equus_asinus_asinus
ENSELUG00000010733	hnrnpub	63	65.054	ENSECAG00000007955	HNRNPU	75	57.265	Equus_caballus
ENSELUG00000010733	hnrnpub	68	61.937	ENSFCAG00000002156	HNRNPU	69	62.609	Felis_catus
ENSELUG00000010733	hnrnpub	90	78.261	ENSFDAG00000006026	HNRNPU	99	78.261	Fukomys_damarensis
ENSELUG00000010733	hnrnpub	100	71.429	ENSFHEG00000022639	hnrnpub	100	71.016	Fundulus_heteroclitus
ENSELUG00000010733	hnrnpub	100	66.629	ENSGMOG00000001755	hnrnpub	99	66.514	Gadus_morhua
ENSELUG00000010733	hnrnpub	70	68.657	ENSGALG00000010671	HNRNPU	76	67.164	Gallus_gallus
ENSELUG00000010733	hnrnpub	85	73.066	ENSGAFG00000009369	hnrnpub	100	69.204	Gambusia_affinis
ENSELUG00000010733	hnrnpub	84	69.160	ENSGACG00000004679	hnrnpub	99	66.002	Gasterosteus_aculeatus
ENSELUG00000010733	hnrnpub	82	56.881	ENSGGOG00000004061	HNRNPU	98	58.038	Gorilla_gorilla
ENSELUG00000010733	hnrnpub	100	72.824	ENSHBUG00000012290	hnrnpub	100	72.813	Haplochromis_burtoni
ENSELUG00000010733	hnrnpub	62	65.996	ENSHGLG00000010594	-	76	57.062	Heterocephalus_glaber_female
ENSELUG00000010733	hnrnpub	91	74.000	ENSHGLG00100015093	HNRNPU	99	74.000	Heterocephalus_glaber_male
ENSELUG00000010733	hnrnpub	85	70.556	ENSHCOG00000020091	hnrnpub	100	67.509	Hippocampus_comes
ENSELUG00000010733	hnrnpub	78	93.617	ENSIPUG00000007749	hnrnpu	98	81.667	Ictalurus_punctatus
ENSELUG00000010733	hnrnpub	85	86.047	ENSJJAG00000011371	Hnrnpu	83	61.842	Jaculus_jaculus
ENSELUG00000010733	hnrnpub	100	70.396	ENSKMAG00000004532	hnrnpub	100	71.228	Kryptolebias_marmoratus
ENSELUG00000010733	hnrnpub	100	74.292	ENSLBEG00000022520	hnrnpub	100	74.416	Labrus_bergylta
ENSELUG00000010733	hnrnpub	99	47.032	ENSLACG00000017463	HNRNPU	99	45.973	Latimeria_chalumnae
ENSELUG00000010733	hnrnpub	88	91.489	ENSLOCG00000016652	hnrnpua	79	84.615	Lepisosteus_oculatus
ENSELUG00000010733	hnrnpub	97	55.203	ENSLAFG00000021377	HNRNPU	77	56.638	Loxodonta_africana
ENSELUG00000010733	hnrnpub	82	56.881	ENSMFAG00000037308	HNRNPU	98	58.038	Macaca_fascicularis
ENSELUG00000010733	hnrnpub	82	56.533	ENSMMUG00000021098	HNRNPU	76	56.941	Macaca_mulatta
ENSELUG00000010733	hnrnpub	82	56.881	ENSMNEG00000043645	HNRNPU	98	58.038	Macaca_nemestrina
ENSELUG00000010733	hnrnpub	100	75.708	ENSMAMG00000007196	hnrnpub	100	74.882	Mastacembelus_armatus
ENSELUG00000010733	hnrnpub	100	72.706	ENSMZEG00005003185	hnrnpub	100	72.695	Maylandia_zebra
ENSELUG00000010733	hnrnpub	82	56.767	ENSMAUG00000008842	Hnrnpu	76	57.347	Mesocricetus_auratus
ENSELUG00000010733	hnrnpub	82	56.750	ENSMICG00000004616	HNRNPU	99	50.335	Microcebus_murinus
ENSELUG00000010733	hnrnpub	82	56.693	ENSMOCG00000015623	Hnrnpu	76	56.860	Microtus_ochrogaster
ENSELUG00000010733	hnrnpub	68	73.469	ENSMODG00000006515	HNRNPU	78	73.469	Monodelphis_domestica
ENSELUG00000010733	hnrnpub	95	75.619	ENSMALG00000018243	hnrnpub	97	74.564	Monopterus_albus
ENSELUG00000010733	hnrnpub	82	56.675	MGP_CAROLIEiJ_G0014962	Hnrnpu	76	56.860	Mus_caroli
ENSELUG00000010733	hnrnpub	68	62.207	ENSMUSG00000039630	Hnrnpu	71	63.066	Mus_musculus
ENSELUG00000010733	hnrnpub	62	65.568	MGP_PahariEiJ_G0028193	Hnrnpu	76	57.001	Mus_pahari
ENSELUG00000010733	hnrnpub	62	65.934	MGP_SPRETEiJ_G0015761	Hnrnpu	76	56.860	Mus_spretus
ENSELUG00000010733	hnrnpub	83	55.698	ENSMLUG00000000475	HNRNPU	80	78.261	Myotis_lucifugus
ENSELUG00000010733	hnrnpub	82	56.845	ENSNGAG00000019075	Hnrnpu	77	56.921	Nannospalax_galili
ENSELUG00000010733	hnrnpub	100	72.824	ENSNBRG00000017855	hnrnpub	100	72.813	Neolamprologus_brichardi
ENSELUG00000010733	hnrnpub	68	73.469	ENSMEUG00000000541	HNRNPU	73	73.469	Notamacropus_eugenii
ENSELUG00000010733	hnrnpub	100	72.695	ENSONIG00000001260	hnrnpub	100	72.577	Oreochromis_niloticus
ENSELUG00000010733	hnrnpub	68	62.814	ENSOCUG00000014469	HNRNPU	63	64.085	Oryctolagus_cuniculus
ENSELUG00000010733	hnrnpub	100	71.513	ENSORLG00000016114	hnrnpub	100	70.000	Oryzias_latipes
ENSELUG00000010733	hnrnpub	100	71.631	ENSORLG00020005363	hnrnpub	100	70.000	Oryzias_latipes_hni
ENSELUG00000010733	hnrnpub	100	71.749	ENSORLG00015001190	hnrnpub	100	69.803	Oryzias_latipes_hsok
ENSELUG00000010733	hnrnpub	84	74.406	ENSOMEG00000014951	hnrnpub	100	71.074	Oryzias_melastigma
ENSELUG00000010733	hnrnpub	82	56.533	ENSOGAG00000014024	HNRNPU	76	57.203	Otolemur_garnettii
ENSELUG00000010733	hnrnpub	82	76.087	ENSOARG00000004985	HNRNPU	85	76.087	Ovis_aries
ENSELUG00000010733	hnrnpub	82	57.012	ENSPPAG00000038652	HNRNPU	98	57.902	Pan_paniscus
ENSELUG00000010733	hnrnpub	62	65.448	ENSPPRG00000002662	HNRNPU	72	56.223	Panthera_pardus
ENSELUG00000010733	hnrnpub	82	57.012	ENSPTRG00000002182	HNRNPU	98	57.902	Pan_troglodytes
ENSELUG00000010733	hnrnpub	88	54.424	ENSPANG00000011643	HNRNPU	98	58.038	Papio_anubis
ENSELUG00000010733	hnrnpub	100	65.661	ENSPKIG00000006885	hnrnpua	100	64.261	Paramormyrops_kingsleyae
ENSELUG00000010733	hnrnpub	100	65.701	ENSPKIG00000022332	hnrnpub	100	65.777	Paramormyrops_kingsleyae
ENSELUG00000010733	hnrnpub	68	73.469	ENSPCIG00000008657	HNRNPU	78	73.469	Phascolarctos_cinereus
ENSELUG00000010733	hnrnpub	100	70.141	ENSPFOG00000002908	hnrnpub	100	71.546	Poecilia_formosa
ENSELUG00000010733	hnrnpub	100	69.438	ENSPLAG00000004160	hnrnpub	100	71.077	Poecilia_latipinna
ENSELUG00000010733	hnrnpub	62	62.206	ENSPCOG00000003883	-	77	56.223	Propithecus_coquereli
ENSELUG00000010733	hnrnpub	82	56.430	ENSPCOG00000018655	-	99	50.000	Propithecus_coquereli
ENSELUG00000010733	hnrnpub	80	58.174	ENSPVAG00000002581	HNRNPU	73	57.632	Pteropus_vampyrus
ENSELUG00000010733	hnrnpub	100	73.059	ENSPNYG00000021642	hnrnpub	100	73.050	Pundamilia_nyererei
ENSELUG00000010733	hnrnpub	100	66.513	ENSPNAG00000001055	hnrnpub	100	65.176	Pygocentrus_nattereri
ENSELUG00000010733	hnrnpub	68	62.375	ENSRNOG00000033790	Hnrnpu	70	63.240	Rattus_norvegicus
ENSELUG00000010733	hnrnpub	82	56.527	ENSRBIG00000031519	HNRNPU	98	57.357	Rhinopithecus_bieti
ENSELUG00000010733	hnrnpub	82	57.050	ENSRROG00000041642	HNRNPU	98	57.724	Rhinopithecus_roxellana
ENSELUG00000010733	hnrnpub	100	67.168	ENSSFOG00015001124	hnrnpub	100	65.970	Scleropages_formosus
ENSELUG00000010733	hnrnpub	100	65.478	ENSSFOG00015019004	hnrnpu	99	66.494	Scleropages_formosus
ENSELUG00000010733	hnrnpub	85	75.978	ENSSMAG00000003607	hnrnpub	100	71.577	Scophthalmus_maximus
ENSELUG00000010733	hnrnpub	100	75.472	ENSSDUG00000005912	hnrnpub	100	76.297	Seriola_dumerili
ENSELUG00000010733	hnrnpub	85	79.050	ENSSLDG00000004899	hnrnpub	100	74.797	Seriola_lalandi_dorsalis
ENSELUG00000010733	hnrnpub	84	80.488	ENSSPUG00000011393	HNRNPU	79	76.087	Sphenodon_punctatus
ENSELUG00000010733	hnrnpub	100	70.478	ENSSPAG00000011853	hnrnpub	100	73.090	Stegastes_partitus
ENSELUG00000010733	hnrnpub	68	62.437	ENSSSCG00000010877	HNRNPU	70	63.130	Sus_scrofa
ENSELUG00000010733	hnrnpub	100	69.535	ENSTRUG00000007759	hnrnpub	100	69.319	Takifugu_rubripes
ENSELUG00000010733	hnrnpub	100	65.242	ENSTNIG00000009725	hnrnpub	98	78.947	Tetraodon_nigroviridis
ENSELUG00000010733	hnrnpub	62	65.996	ENSUAMG00000021120	HNRNPU	99	53.082	Ursus_americanus
ENSELUG00000010733	hnrnpub	83	68.085	ENSUMAG00000012322	HNRNPU	84	68.085	Ursus_maritimus
ENSELUG00000010733	hnrnpub	76	76.087	ENSVPAG00000010520	HNRNPU	82	76.087	Vicugna_pacos
ENSELUG00000010733	hnrnpub	77	65.814	ENSVVUG00000026524	HNRNPU	70	62.957	Vulpes_vulpes
ENSELUG00000010733	hnrnpub	99	48.811	ENSXETG00000011386	hnrnpu	77	54.000	Xenopus_tropicalis
ENSELUG00000010733	hnrnpub	100	69.438	ENSXMAG00000010356	hnrnpub	100	69.708	Xiphophorus_maculatus