EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000010742 (Gene tree)
Gene ID: 105017268
Gene Symbol: chd5
Alias: -
Full Name: chromodomain-helicase-DNA-binding protein 5
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 26286 bases
Position: chrLG17:22035594-22061879
Accession: 105017268
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000032495	ResIII	PF04851.15	2.1e-08	1	1
ENSELUP00000032464	ResIII	PF04851.15	2.3e-08	1	1
ENSELUP00000032522	ResIII	PF04851.15	2.4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000002994	-	5415	XM_010881713	ENSELUP00000032522	1804 (aa)	XP_010880015	-
ENSELUT00000003061	-	5367	-	ENSELUP00000032495	1788 (aa)	-	-
ENSELUT00000003135	-	5340	-	ENSELUP00000032464	1779 (aa)	-	-

Gene Model

Click here to download ENSELUG00000010742's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000010742's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000010742	chd5	94	68.686	ENSELUG00000021276	chd4a	96	68.602
ENSELUG00000010742	chd5	90	79.070	ENSELUG00000018086	-	89	79.070
ENSELUG00000010742	chd5	83	89.116	ENSELUG00000019499	chd3	98	89.116

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000010742	chd5	89	92.417	ENSG00000116254	CHD5	92	82.227	Homo_sapiens
ENSELUG00000010742	chd5	90	92.093	ENSAMEG00000009880	CHD5	95	75.830	Ailuropoda_melanoleuca
ENSELUG00000010742	chd5	93	90.196	ENSACIG00000012582	chd5	99	83.224	Amphilophus_citrinellus
ENSELUG00000010742	chd5	94	90.909	ENSAOCG00000020356	chd5	89	87.838	Amphiprion_ocellaris
ENSELUG00000010742	chd5	91	92.593	ENSAPLG00000015475	CHD5	88	82.745	Anas_platyrhynchos
ENSELUG00000010742	chd5	88	90.148	ENSACAG00000002441	CHD5	93	74.317	Anolis_carolinensis
ENSELUG00000010742	chd5	86	94.872	ENSANAG00000001078	CHD5	87	81.313	Aotus_nancymaae
ENSELUG00000010742	chd5	98	80.960	ENSACLG00000003012	chd5	99	80.606	Astatotilapia_calliptera
ENSELUG00000010742	chd5	92	85.637	ENSAMXG00000008921	chd5	97	85.800	Astyanax_mexicanus
ENSELUG00000010742	chd5	89	91.628	ENSBTAG00000040477	CHD5	99	76.066	Bos_taurus
ENSELUG00000010742	chd5	89	92.417	ENSCJAG00000000101	CHD5	94	76.304	Callithrix_jacchus
ENSELUG00000010742	chd5	94	76.428	ENSCAFG00000019545	CHD5	99	76.564	Canis_familiaris
ENSELUG00000010742	chd5	95	77.967	ENSCAFG00020008689	CHD5	91	77.673	Canis_lupus_dingo
ENSELUG00000010742	chd5	90	91.667	ENSCHIG00000015027	CHD5	93	75.412	Capra_hircus
ENSELUG00000010742	chd5	90	92.417	ENSTSYG00000033991	CHD5	94	74.878	Carlito_syrichta
ENSELUG00000010742	chd5	95	78.226	ENSCAPG00000009294	CHD5	95	77.230	Cavia_aperea
ENSELUG00000010742	chd5	95	78.226	ENSCPOG00000025080	CHD5	95	77.230	Cavia_porcellus
ENSELUG00000010742	chd5	93	92.417	ENSCCAG00000024756	CHD5	94	79.743	Cebus_capucinus
ENSELUG00000010742	chd5	89	92.417	ENSCATG00000043011	CHD5	94	76.250	Cercocebus_atys
ENSELUG00000010742	chd5	95	78.409	ENSCLAG00000010589	CHD5	95	77.593	Chinchilla_lanigera
ENSELUG00000010742	chd5	89	92.417	ENSCSAG00000000733	CHD5	94	76.263	Chlorocebus_sabaeus
ENSELUG00000010742	chd5	89	92.523	ENSCPBG00000019363	CHD5	93	82.609	Chrysemys_picta_bellii
ENSELUG00000010742	chd5	89	92.417	ENSCANG00000032302	CHD5	94	76.317	Colobus_angolensis_palliatus
ENSELUG00000010742	chd5	55	79.208	ENSCGRG00001011042	Chd5	95	80.000	Cricetulus_griseus_chok1gshd
ENSELUG00000010742	chd5	92	81.818	ENSCGRG00000011341	Chd5	95	76.940	Cricetulus_griseus_crigri
ENSELUG00000010742	chd5	94	88.446	ENSDARG00000105083	chd5	96	88.408	Danio_rerio
ENSELUG00000010742	chd5	92	83.256	ENSDARG00000025789	chd4b	85	83.256	Danio_rerio
ENSELUG00000010742	chd5	90	77.646	ENSDNOG00000046342	CHD5	93	72.104	Dasypus_novemcinctus
ENSELUG00000010742	chd5	90	91.628	ENSDORG00000005923	Chd5	95	77.059	Dipodomys_ordii
ENSELUG00000010742	chd5	89	91.628	ENSEASG00005021464	CHD5	89	92.398	Equus_asinus_asinus
ENSELUG00000010742	chd5	93	91.628	ENSECAG00000025043	CHD5	92	91.626	Equus_caballus
ENSELUG00000010742	chd5	68	95.333	ENSEEUG00000002772	CHD5	61	95.333	Erinaceus_europaeus
ENSELUG00000010742	chd5	90	91.628	ENSFCAG00000006319	CHD5	94	76.609	Felis_catus
ENSELUG00000010742	chd5	89	90.826	ENSFALG00000009740	CHD5	94	74.757	Ficedula_albicollis
ENSELUG00000010742	chd5	95	78.079	ENSFDAG00000012881	CHD5	92	77.298	Fukomys_damarensis
ENSELUG00000010742	chd5	92	81.818	ENSGALG00000000747	CHD5	94	75.654	Gallus_gallus
ENSELUG00000010742	chd5	62	84.683	ENSGACG00000004389	chd5	98	84.024	Gasterosteus_aculeatus
ENSELUG00000010742	chd5	90	91.667	ENSGAGG00000001590	CHD5	97	90.777	Gopherus_agassizii
ENSELUG00000010742	chd5	89	92.417	ENSGGOG00000000708	CHD5	95	76.263	Gorilla_gorilla
ENSELUG00000010742	chd5	98	81.598	ENSHBUG00000013453	chd5	99	81.229	Haplochromis_burtoni
ENSELUG00000010742	chd5	92	82.213	ENSHGLG00000018184	CHD5	97	75.845	Heterocephalus_glaber_female
ENSELUG00000010742	chd5	92	82.213	ENSHGLG00100013261	CHD5	94	69.776	Heterocephalus_glaber_male
ENSELUG00000010742	chd5	92	87.698	ENSIPUG00000005446	chd5	97	83.776	Ictalurus_punctatus
ENSELUG00000010742	chd5	88	91.584	ENSSTOG00000002778	CHD5	95	77.323	Ictidomys_tridecemlineatus
ENSELUG00000010742	chd5	96	79.170	ENSJJAG00000019072	Chd5	93	77.432	Jaculus_jaculus
ENSELUG00000010742	chd5	93	95.431	ENSLOCG00000004944	chd5	87	87.938	Lepisosteus_oculatus
ENSELUG00000010742	chd5	90	91.628	ENSLAFG00000006348	CHD5	100	75.830	Loxodonta_africana
ENSELUG00000010742	chd5	89	91.943	ENSMFAG00000033993	CHD5	99	76.217	Macaca_fascicularis
ENSELUG00000010742	chd5	88	91.089	ENSMMUG00000016838	CHD5	93	77.691	Macaca_mulatta
ENSELUG00000010742	chd5	89	92.417	ENSMNEG00000040044	CHD5	94	76.263	Macaca_nemestrina
ENSELUG00000010742	chd5	91	77.445	ENSMLEG00000039166	CHD5	95	73.273	Mandrillus_leucophaeus
ENSELUG00000010742	chd5	98	79.587	ENSMZEG00005000841	chd5	99	79.468	Maylandia_zebra
ENSELUG00000010742	chd5	91	81.496	ENSMGAG00000001055	CHD5	94	75.543	Meleagris_gallopavo
ENSELUG00000010742	chd5	95	78.283	ENSMICG00000017862	CHD5	93	78.171	Microcebus_murinus
ENSELUG00000010742	chd5	90	91.163	ENSMOCG00000011049	Chd5	95	79.238	Microtus_ochrogaster
ENSELUG00000010742	chd5	74	91.584	ENSMODG00000006294	CHD5	63	91.584	Monodelphis_domestica
ENSELUG00000010742	chd5	96	89.062	ENSMALG00000002831	chd5	93	89.062	Monopterus_albus
ENSELUG00000010742	chd5	90	91.163	MGP_CAROLIEiJ_G0026857	Chd5	93	76.009	Mus_caroli
ENSELUG00000010742	chd5	90	90.783	ENSMUSG00000005045	Chd5	90	80.412	Mus_musculus
ENSELUG00000010742	chd5	90	90.783	MGP_PahariEiJ_G0029205	Chd5	93	77.094	Mus_pahari
ENSELUG00000010742	chd5	90	90.783	MGP_SPRETEiJ_G0027850	Chd5	95	78.854	Mus_spretus
ENSELUG00000010742	chd5	88	91.089	ENSMPUG00000007122	CHD5	82	91.089	Mustela_putorius_furo
ENSELUG00000010742	chd5	95	76.071	ENSNGAG00000019812	Chd5	91	75.828	Nannospalax_galili
ENSELUG00000010742	chd5	91	78.808	ENSNLEG00000010320	CHD5	95	74.267	Nomascus_leucogenys
ENSELUG00000010742	chd5	81	74.380	ENSOPRG00000004304	CHD5	80	73.400	Ochotona_princeps
ENSELUG00000010742	chd5	95	78.125	ENSODEG00000010262	CHD5	95	77.414	Octodon_degus
ENSELUG00000010742	chd5	94	91.304	ENSONIG00000000619	chd5	88	91.304	Oreochromis_niloticus
ENSELUG00000010742	chd5	89	90.783	ENSOANG00000001819	CHD5	84	90.686	Ornithorhynchus_anatinus
ENSELUG00000010742	chd5	96	76.099	ENSOGAG00000005703	CHD5	94	76.198	Otolemur_garnettii
ENSELUG00000010742	chd5	90	91.244	ENSOARG00000013425	CHD5	94	76.478	Ovis_aries
ENSELUG00000010742	chd5	89	92.417	ENSPPAG00000034048	CHD5	95	76.221	Pan_paniscus
ENSELUG00000010742	chd5	90	91.628	ENSPPRG00000009453	CHD5	87	83.794	Panthera_pardus
ENSELUG00000010742	chd5	95	71.018	ENSPTIG00000013926	CHD5	95	71.529	Panthera_tigris_altaica
ENSELUG00000010742	chd5	89	92.417	ENSPTRG00000000075	CHD5	94	76.221	Pan_troglodytes
ENSELUG00000010742	chd5	89	92.417	ENSPANG00000006765	CHD5	94	76.263	Papio_anubis
ENSELUG00000010742	chd5	95	85.565	ENSPKIG00000004282	chd5	98	84.308	Paramormyrops_kingsleyae
ENSELUG00000010742	chd5	90	77.664	ENSPSIG00000006414	CHD5	90	77.785	Pelodiscus_sinensis
ENSELUG00000010742	chd5	66	80.301	ENSPEMG00000014799	Chd5	92	80.433	Peromyscus_maniculatus_bairdii
ENSELUG00000010742	chd5	90	91.628	ENSPCIG00000028310	CHD5	91	76.804	Phascolarctos_cinereus
ENSELUG00000010742	chd5	93	92.975	ENSPLAG00000005343	chd5	99	81.764	Poecilia_latipinna
ENSELUG00000010742	chd5	96	77.586	ENSPPYG00000001952	CHD5	95	77.840	Pongo_abelii
ENSELUG00000010742	chd5	88	91.584	ENSPCOG00000022930	CHD5	94	76.291	Propithecus_coquereli
ENSELUG00000010742	chd5	94	90.438	ENSPNYG00000003183	chd5	91	90.438	Pundamilia_nyererei
ENSELUG00000010742	chd5	90	91.163	ENSRNOG00000011268	Chd5	94	76.009	Rattus_norvegicus
ENSELUG00000010742	chd5	90	92.417	ENSRBIG00000032140	CHD5	85	91.584	Rhinopithecus_bieti
ENSELUG00000010742	chd5	89	92.417	ENSRROG00000041146	CHD5	94	76.209	Rhinopithecus_roxellana
ENSELUG00000010742	chd5	90	92.417	ENSSBOG00000001955	CHD5	99	78.056	Saimiri_boliviensis_boliviensis
ENSELUG00000010742	chd5	92	76.394	ENSSHAG00000018641	CHD5	97	69.653	Sarcophilus_harrisii
ENSELUG00000010742	chd5	96	88.446	ENSSFOG00015006296	chd5	97	82.012	Scleropages_formosus
ENSELUG00000010742	chd5	98	86.382	ENSSDUG00000017526	chd5	99	86.462	Seriola_dumerili
ENSELUG00000010742	chd5	89	92.056	ENSSPUG00000010622	CHD5	87	82.812	Sphenodon_punctatus
ENSELUG00000010742	chd5	90	90.455	ENSSSCG00000003366	CHD5	99	76.467	Sus_scrofa
ENSELUG00000010742	chd5	90	84.914	ENSTGUG00000002634	-	91	80.567	Taeniopygia_guttata
ENSELUG00000010742	chd5	56	84.283	ENSTNIG00000004346	chd5	99	84.366	Tetraodon_nigroviridis
ENSELUG00000010742	chd5	88	91.089	ENSTTRG00000010468	CHD5	94	76.753	Tursiops_truncatus
ENSELUG00000010742	chd5	90	92.093	ENSUAMG00000024509	CHD5	92	90.777	Ursus_americanus
ENSELUG00000010742	chd5	88	93.846	ENSUMAG00000024173	CHD5	88	84.000	Ursus_maritimus
ENSELUG00000010742	chd5	89	89.952	ENSVVUG00000026480	CHD5	89	93.333	Vulpes_vulpes
ENSELUG00000010742	chd5	98	74.011	ENSXETG00000002904	chd5	97	73.810	Xenopus_tropicalis
ENSELUG00000010742	chd5	63	85.175	ENSXCOG00000014202	chd5	99	85.093	Xiphophorus_couchianus