EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000010942 (Gene tree)
Gene ID: 105014823
Gene Symbol: sfswap
Alias: sfrs8|srsf8|zgc:56184
Full Name: splicing factor SWAP
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 110577 bases
Position: chrLG14:17476853-17587429
Accession: 105014823
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000032826	DRY_EERY	PF09750.9	1.9e-31	1	1
ENSELUP00000010425	DRY_EERY	PF09750.9	3.4e-31	1	1
ENSELUP00000032861	DRY_EERY	PF09750.9	3.4e-31	1	1
ENSELUP00000032861	Surp	PF01805.20	1.6e-27	1	2
ENSELUP00000032861	Surp	PF01805.20	1.6e-27	2	2
ENSELUP00000010425	Surp	PF01805.20	1.6e-27	1	2
ENSELUP00000010425	Surp	PF01805.20	1.6e-27	2	2
ENSELUP00000032826	Surp	PF01805.20	1.5e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000002138	-	4950	XM_013137140	ENSELUP00000032861	983 (aa)	XP_012992594	UPI000661ADEF
ENSELUT00000002175	-	6802	-	ENSELUP00000010425	983 (aa)	-	-
ENSELUT00000002236	-	1962	-	ENSELUP00000032826	653 (aa)	-	-

Gene Model

Click here to download ENSELUG00000010942's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000010942's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000010942	sfswap	90	64.819	ENSG00000061936	SFSWAP	94	67.544	Homo_sapiens
ENSELUG00000010942	sfswap	80	90.698	ENSAPOG00000005784	sfswap	89	86.957	Acanthochromis_polyacanthus
ENSELUG00000010942	sfswap	89	65.347	ENSAMEG00000013818	SFSWAP	100	53.861	Ailuropoda_melanoleuca
ENSELUG00000010942	sfswap	94	65.333	ENSAOCG00000016469	sfswap	70	68.237	Amphiprion_ocellaris
ENSELUG00000010942	sfswap	94	65.185	ENSAPEG00000004965	sfswap	70	68.102	Amphiprion_percula
ENSELUG00000010942	sfswap	94	64.663	ENSATEG00000021053	sfswap	86	67.383	Anabas_testudineus
ENSELUG00000010942	sfswap	80	66.213	ENSAPLG00000013808	SFSWAP	97	53.162	Anas_platyrhynchos
ENSELUG00000010942	sfswap	94	50.611	ENSACAG00000007220	SFSWAP	99	51.646	Anolis_carolinensis
ENSELUG00000010942	sfswap	94	55.340	ENSANAG00000001518	SFSWAP	100	52.627	Aotus_nancymaae
ENSELUG00000010942	sfswap	94	63.636	ENSACLG00000020159	sfswap	88	63.624	Astatotilapia_calliptera
ENSELUG00000010942	sfswap	93	59.689	ENSAMXG00000008657	sfswap	100	60.019	Astyanax_mexicanus
ENSELUG00000010942	sfswap	94	56.215	ENSBTAG00000000439	SFSWAP	59	95.918	Bos_taurus
ENSELUG00000010942	sfswap	100	50.282	ENSCJAG00000003613	SFSWAP	100	52.099	Callithrix_jacchus
ENSELUG00000010942	sfswap	100	53.533	ENSCAFG00000006625	SFSWAP	100	54.247	Canis_familiaris
ENSELUG00000010942	sfswap	88	47.571	ENSCAFG00020011254	SFSWAP	99	48.869	Canis_lupus_dingo
ENSELUG00000010942	sfswap	94	52.646	ENSCHIG00000008838	SFSWAP	100	53.468	Capra_hircus
ENSELUG00000010942	sfswap	84	62.250	ENSTSYG00000010303	SFSWAP	100	53.009	Carlito_syrichta
ENSELUG00000010942	sfswap	83	65.598	ENSCAPG00000004394	SFSWAP	96	52.518	Cavia_aperea
ENSELUG00000010942	sfswap	90	63.855	ENSCPOG00000005280	SFSWAP	100	52.964	Cavia_porcellus
ENSELUG00000010942	sfswap	90	65.060	ENSCCAG00000037255	SFSWAP	100	52.828	Cebus_capucinus
ENSELUG00000010942	sfswap	90	65.301	ENSCATG00000031094	SFSWAP	100	52.964	Cercocebus_atys
ENSELUG00000010942	sfswap	90	63.614	ENSCLAG00000008380	SFSWAP	100	52.541	Chinchilla_lanigera
ENSELUG00000010942	sfswap	90	65.060	ENSCSAG00000001884	SFSWAP	100	52.868	Chlorocebus_sabaeus
ENSELUG00000010942	sfswap	76	60.630	ENSCHOG00000003578	SFSWAP	93	58.416	Choloepus_hoffmanni
ENSELUG00000010942	sfswap	97	52.246	ENSCPBG00000024757	SFSWAP	96	51.917	Chrysemys_picta_bellii
ENSELUG00000010942	sfswap	90	65.060	ENSCANG00000036501	SFSWAP	100	52.868	Colobus_angolensis_palliatus
ENSELUG00000010942	sfswap	99	64.234	ENSCGRG00001011284	Sfswap	100	52.253	Cricetulus_griseus_chok1gshd
ENSELUG00000010942	sfswap	99	64.234	ENSCGRG00000017417	Sfswap	100	52.253	Cricetulus_griseus_crigri
ENSELUG00000010942	sfswap	93	62.647	ENSCSEG00000003773	sfswap	72	64.486	Cynoglossus_semilaevis
ENSELUG00000010942	sfswap	59	58.150	ENSCVAG00000001205	-	80	57.987	Cyprinodon_variegatus
ENSELUG00000010942	sfswap	100	63.132	ENSDARG00000005980	sfswap	100	62.586	Danio_rerio
ENSELUG00000010942	sfswap	90	64.929	ENSDNOG00000018742	SFSWAP	99	50.180	Dasypus_novemcinctus
ENSELUG00000010942	sfswap	87	57.447	ENSDORG00000010352	Sfswap	99	49.602	Dipodomys_ordii
ENSELUG00000010942	sfswap	67	49.145	FBgn0003638	su(w[a])	56	59.551	Drosophila_melanogaster
ENSELUG00000010942	sfswap	80	82.895	ENSETEG00000016657	-	56	100.000	Echinops_telfairi
ENSELUG00000010942	sfswap	71	58.580	ENSEBUG00000016748	SFSWAP	63	57.396	Eptatretus_burgeri
ENSELUG00000010942	sfswap	90	62.704	ENSEASG00005016502	SFSWAP	100	53.654	Equus_asinus_asinus
ENSELUG00000010942	sfswap	90	62.471	ENSECAG00000007657	SFSWAP	99	53.137	Equus_caballus
ENSELUG00000010942	sfswap	76	53.381	ENSEEUG00000001713	SFSWAP	99	46.476	Erinaceus_europaeus
ENSELUG00000010942	sfswap	100	64.439	ENSFCAG00000010778	SFSWAP	100	53.979	Felis_catus
ENSELUG00000010942	sfswap	90	56.395	ENSFALG00000009577	SFSWAP	95	54.134	Ficedula_albicollis
ENSELUG00000010942	sfswap	100	53.212	ENSFDAG00000017235	SFSWAP	100	53.155	Fukomys_damarensis
ENSELUG00000010942	sfswap	62	80.812	ENSGMOG00000009205	sfswap	52	83.871	Gadus_morhua
ENSELUG00000010942	sfswap	87	69.152	ENSGALG00000002487	SFSWAP	81	58.146	Gallus_gallus
ENSELUG00000010942	sfswap	94	62.407	ENSGAFG00000006272	sfswap	100	58.491	Gambusia_affinis
ENSELUG00000010942	sfswap	83	78.626	ENSGACG00000017647	sfswap	100	54.051	Gasterosteus_aculeatus
ENSELUG00000010942	sfswap	97	52.246	ENSGAGG00000002611	SFSWAP	96	51.819	Gopherus_agassizii
ENSELUG00000010942	sfswap	85	61.845	ENSGGOG00000014877	SFSWAP	100	52.772	Gorilla_gorilla
ENSELUG00000010942	sfswap	94	63.543	ENSHBUG00000005629	sfswap	88	65.212	Haplochromis_burtoni
ENSELUG00000010942	sfswap	90	63.855	ENSHGLG00000019216	SFSWAP	100	52.828	Heterocephalus_glaber_female
ENSELUG00000010942	sfswap	90	63.614	ENSHGLG00100019350	SFSWAP	100	52.733	Heterocephalus_glaber_male
ENSELUG00000010942	sfswap	94	61.739	ENSHCOG00000009475	sfswap	100	57.609	Hippocampus_comes
ENSELUG00000010942	sfswap	93	61.383	ENSIPUG00000010598	sfswap	100	59.941	Ictalurus_punctatus
ENSELUG00000010942	sfswap	100	52.358	ENSSTOG00000000773	SFSWAP	100	52.642	Ictidomys_tridecemlineatus
ENSELUG00000010942	sfswap	100	53.089	ENSJJAG00000006609	Sfswap	100	52.828	Jaculus_jaculus
ENSELUG00000010942	sfswap	94	62.903	ENSKMAG00000013168	sfswap	70	65.765	Kryptolebias_marmoratus
ENSELUG00000010942	sfswap	93	62.739	ENSLBEG00000010239	sfswap	75	66.985	Labrus_bergylta
ENSELUG00000010942	sfswap	97	49.851	ENSLACG00000018678	SFSWAP	96	50.895	Latimeria_chalumnae
ENSELUG00000010942	sfswap	94	60.342	ENSLOCG00000006202	sfswap	100	57.502	Lepisosteus_oculatus
ENSELUG00000010942	sfswap	82	68.142	ENSLAFG00000014462	SFSWAP	100	52.371	Loxodonta_africana
ENSELUG00000010942	sfswap	91	65.301	ENSMFAG00000037352	SFSWAP	53	95.918	Macaca_fascicularis
ENSELUG00000010942	sfswap	100	53.698	ENSMMUG00000020343	SFSWAP	100	53.059	Macaca_mulatta
ENSELUG00000010942	sfswap	100	53.698	ENSMNEG00000041002	SFSWAP	100	53.059	Macaca_nemestrina
ENSELUG00000010942	sfswap	90	63.350	ENSMLEG00000035728	SFSWAP	100	52.253	Mandrillus_leucophaeus
ENSELUG00000010942	sfswap	99	63.062	ENSMAMG00000006631	sfswap	100	61.690	Mastacembelus_armatus
ENSELUG00000010942	sfswap	94	63.636	ENSMZEG00005017834	SFSWAP	70	63.462	Maylandia_zebra
ENSELUG00000010942	sfswap	87	68.638	ENSMGAG00000002191	SFSWAP	80	57.825	Meleagris_gallopavo
ENSELUG00000010942	sfswap	90	64.819	ENSMICG00000004465	SFSWAP	100	53.397	Microcebus_murinus
ENSELUG00000010942	sfswap	89	64.964	ENSMOCG00000014390	Sfswap	100	52.632	Microtus_ochrogaster
ENSELUG00000010942	sfswap	83	62.500	ENSMODG00000015581	SFSWAP	91	56.486	Monodelphis_domestica
ENSELUG00000010942	sfswap	81	84.091	ENSMALG00000012603	sfswap	100	59.980	Monopterus_albus
ENSELUG00000010942	sfswap	99	63.990	MGP_CAROLIEiJ_G0027780	Sfswap	94	66.667	Mus_caroli
ENSELUG00000010942	sfswap	99	64.720	ENSMUSG00000029439	Sfswap	94	66.667	Mus_musculus
ENSELUG00000010942	sfswap	99	63.990	MGP_PahariEiJ_G0024360	Sfswap	94	66.667	Mus_pahari
ENSELUG00000010942	sfswap	100	64.337	MGP_SPRETEiJ_G0028779	Sfswap	94	66.667	Mus_spretus
ENSELUG00000010942	sfswap	100	65.632	ENSMPUG00000002218	SFSWAP	100	54.572	Mustela_putorius_furo
ENSELUG00000010942	sfswap	93	56.294	ENSMLUG00000011296	SFSWAP	81	56.446	Myotis_lucifugus
ENSELUG00000010942	sfswap	98	51.030	ENSNGAG00000018167	Sfswap	100	52.445	Nannospalax_galili
ENSELUG00000010942	sfswap	85	61.502	ENSNBRG00000020857	sfswap	68	64.829	Neolamprologus_brichardi
ENSELUG00000010942	sfswap	88	62.379	ENSNLEG00000008386	SFSWAP	99	52.441	Nomascus_leucogenys
ENSELUG00000010942	sfswap	68	59.468	ENSMEUG00000009556	-	80	58.389	Notamacropus_eugenii
ENSELUG00000010942	sfswap	81	57.317	ENSOPRG00000006983	-	76	60.976	Ochotona_princeps
ENSELUG00000010942	sfswap	89	64.234	ENSODEG00000008020	SFSWAP	100	51.962	Octodon_degus
ENSELUG00000010942	sfswap	94	61.411	ENSONIG00000003757	sfswap	86	64.939	Oreochromis_niloticus
ENSELUG00000010942	sfswap	82	68.639	ENSOANG00000013861	SFSWAP	100	52.605	Ornithorhynchus_anatinus
ENSELUG00000010942	sfswap	82	61.347	ENSOCUG00000002165	SFSWAP	100	52.331	Oryctolagus_cuniculus
ENSELUG00000010942	sfswap	94	63.158	ENSORLG00000010983	sfswap	100	60.573	Oryzias_latipes
ENSELUG00000010942	sfswap	94	63.811	ENSORLG00020010779	sfswap	71	67.804	Oryzias_latipes_hni
ENSELUG00000010942	sfswap	94	63.447	ENSORLG00015023093	sfswap	99	58.672	Oryzias_latipes_hsok
ENSELUG00000010942	sfswap	94	63.785	ENSOMEG00000022065	sfswap	100	59.783	Oryzias_melastigma
ENSELUG00000010942	sfswap	82	60.848	ENSOGAG00000016724	SFSWAP	99	53.284	Otolemur_garnettii
ENSELUG00000010942	sfswap	94	52.510	ENSOARG00000014314	SFSWAP	100	53.365	Ovis_aries
ENSELUG00000010942	sfswap	84	61.596	ENSPPAG00000036706	SFSWAP	100	52.717	Pan_paniscus
ENSELUG00000010942	sfswap	100	61.364	ENSPPRG00000017318	SFSWAP	83	57.969	Panthera_pardus
ENSELUG00000010942	sfswap	88	63.747	ENSPTIG00000004304	SFSWAP	97	63.260	Panthera_tigris_altaica
ENSELUG00000010942	sfswap	84	61.596	ENSPTRG00000005640	SFSWAP	100	52.526	Pan_troglodytes
ENSELUG00000010942	sfswap	90	65.301	ENSPANG00000019737	SFSWAP	100	52.964	Papio_anubis
ENSELUG00000010942	sfswap	93	59.216	ENSPKIG00000008327	sfswap	100	58.251	Paramormyrops_kingsleyae
ENSELUG00000010942	sfswap	100	64.183	ENSPEMG00000001237	Sfswap	100	52.637	Peromyscus_maniculatus_bairdii
ENSELUG00000010942	sfswap	62	50.759	ENSPMAG00000008279	sfswap	98	51.982	Petromyzon_marinus
ENSELUG00000010942	sfswap	83	69.412	ENSPCIG00000006062	SFSWAP	90	64.850	Phascolarctos_cinereus
ENSELUG00000010942	sfswap	94	63.501	ENSPFOG00000019657	sfswap	72	65.940	Poecilia_formosa
ENSELUG00000010942	sfswap	94	63.852	ENSPLAG00000008513	sfswap	99	58.524	Poecilia_latipinna
ENSELUG00000010942	sfswap	94	63.407	ENSPMEG00000008716	sfswap	72	65.940	Poecilia_mexicana
ENSELUG00000010942	sfswap	94	63.556	ENSPREG00000006692	sfswap	100	60.079	Poecilia_reticulata
ENSELUG00000010942	sfswap	88	65.060	ENSPPYG00000005129	SFSWAP	100	52.237	Pongo_abelii
ENSELUG00000010942	sfswap	67	57.258	ENSPCAG00000004977	-	60	56.424	Procavia_capensis
ENSELUG00000010942	sfswap	74	70.345	ENSPCOG00000023786	SFSWAP	100	52.823	Propithecus_coquereli
ENSELUG00000010942	sfswap	61	81.667	ENSPVAG00000014918	SFSWAP	57	97.872	Pteropus_vampyrus
ENSELUG00000010942	sfswap	94	63.397	ENSPNYG00000012660	sfswap	87	65.125	Pundamilia_nyererei
ENSELUG00000010942	sfswap	93	60.714	ENSPNAG00000007073	sfswap	100	60.158	Pygocentrus_nattereri
ENSELUG00000010942	sfswap	99	63.990	ENSRNOG00000000931	Sfswap	100	52.657	Rattus_norvegicus
ENSELUG00000010942	sfswap	90	65.301	ENSRBIG00000036330	SFSWAP	100	52.000	Rhinopithecus_bieti
ENSELUG00000010942	sfswap	90	65.301	ENSRROG00000032001	SFSWAP	100	52.964	Rhinopithecus_roxellana
ENSELUG00000010942	sfswap	90	65.060	ENSSBOG00000026217	SFSWAP	100	54.560	Saimiri_boliviensis_boliviensis
ENSELUG00000010942	sfswap	83	54.096	ENSSHAG00000014232	SFSWAP	100	52.459	Sarcophilus_harrisii
ENSELUG00000010942	sfswap	97	61.162	ENSSFOG00015000766	sfswap	100	58.651	Scleropages_formosus
ENSELUG00000010942	sfswap	94	64.317	ENSSMAG00000018718	sfswap	90	66.492	Scophthalmus_maximus
ENSELUG00000010942	sfswap	94	66.077	ENSSDUG00000021680	sfswap	69	68.151	Seriola_dumerili
ENSELUG00000010942	sfswap	94	65.976	ENSSLDG00000010835	sfswap	84	68.556	Seriola_lalandi_dorsalis
ENSELUG00000010942	sfswap	78	65.242	ENSSARG00000000424	SFSWAP	81	57.563	Sorex_araneus
ENSELUG00000010942	sfswap	75	52.218	ENSSPUG00000010272	SFSWAP	70	54.923	Sphenodon_punctatus
ENSELUG00000010942	sfswap	94	65.782	ENSSPAG00000014310	sfswap	88	67.500	Stegastes_partitus
ENSELUG00000010942	sfswap	56	95.918	ENSSSCG00000009744	SFSWAP	100	53.713	Sus_scrofa
ENSELUG00000010942	sfswap	79	65.489	ENSTGUG00000004623	SFSWAP	99	53.854	Taeniopygia_guttata
ENSELUG00000010942	sfswap	57	72.917	ENSTBEG00000004983	-	52	74.825	Tupaia_belangeri
ENSELUG00000010942	sfswap	87	63.981	ENSTTRG00000013478	SFSWAP	94	59.653	Tursiops_truncatus
ENSELUG00000010942	sfswap	100	65.394	ENSUAMG00000016807	SFSWAP	100	54.002	Ursus_americanus
ENSELUG00000010942	sfswap	84	65.116	ENSUMAG00000002957	SFSWAP	76	65.375	Ursus_maritimus
ENSELUG00000010942	sfswap	63	86.458	ENSVPAG00000010479	-	62	67.480	Vicugna_pacos
ENSELUG00000010942	sfswap	100	53.824	ENSVVUG00000010753	SFSWAP	100	54.344	Vulpes_vulpes
ENSELUG00000010942	sfswap	88	61.750	ENSXETG00000009350	sfswap	92	55.614	Xenopus_tropicalis
ENSELUG00000010942	sfswap	94	62.239	ENSXMAG00000009020	sfswap	72	63.870	Xiphophorus_maculatus