EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000010974 (Gene tree)
Gene ID: 105018527
Gene Symbol: usb1
Alias: zgc:91896
Full Name: U6 snRNA biogenesis phosphodiesterase 1
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 2394 bases
Position: chrLG19:28835206-28837599
Accession: 105018527
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000032882	HVSL	PF09749.9	6.1e-63	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000002080	-	822	XM_020040234	ENSELUP00000032882	273 (aa)	XP_019895793	-

Gene Model

Click here to download ENSELUG00000010974's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000010974's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000010974	usb1	88	47.755	ENSG00000103005	USB1	100	49.302	Homo_sapiens
ENSELUG00000010974	usb1	99	61.071	ENSAPOG00000011942	usb1	89	64.400	Acanthochromis_polyacanthus
ENSELUG00000010974	usb1	84	50.000	ENSAMEG00000017205	USB1	84	50.000	Ailuropoda_melanoleuca
ENSELUG00000010974	usb1	84	66.228	ENSACIG00000012234	usb1	83	66.228	Amphilophus_citrinellus
ENSELUG00000010974	usb1	99	60.638	ENSAOCG00000014831	usb1	89	64.683	Amphiprion_ocellaris
ENSELUG00000010974	usb1	99	60.993	ENSAPEG00000000296	usb1	89	65.079	Amphiprion_percula
ENSELUG00000010974	usb1	100	59.507	ENSATEG00000009348	usb1	89	62.451	Anabas_testudineus
ENSELUG00000010974	usb1	82	55.752	ENSAPLG00000002756	USB1	100	56.195	Anas_platyrhynchos
ENSELUG00000010974	usb1	84	51.965	ENSACAG00000015481	USB1	100	51.965	Anolis_carolinensis
ENSELUG00000010974	usb1	88	47.755	ENSANAG00000035640	USB1	94	47.200	Aotus_nancymaae
ENSELUG00000010974	usb1	92	65.079	ENSACLG00000020586	usb1	89	65.079	Astatotilapia_calliptera
ENSELUG00000010974	usb1	82	65.333	ENSAMXG00000040146	usb1	74	65.333	Astyanax_mexicanus
ENSELUG00000010974	usb1	99	44.245	ENSBTAG00000015758	USB1	94	46.400	Bos_taurus
ENSELUG00000010974	usb1	88	47.755	ENSCJAG00000011733	USB1	94	47.200	Callithrix_jacchus
ENSELUG00000010974	usb1	83	48.458	ENSCAFG00000008556	USB1	60	48.458	Canis_familiaris
ENSELUG00000010974	usb1	83	48.458	ENSCAFG00020009263	USB1	85	48.458	Canis_lupus_dingo
ENSELUG00000010974	usb1	99	45.421	ENSCHIG00000024290	USB1	86	48.684	Capra_hircus
ENSELUG00000010974	usb1	84	46.930	ENSTSYG00000006997	USB1	86	46.930	Carlito_syrichta
ENSELUG00000010974	usb1	82	40.444	ENSCAPG00000009057	USB1	96	40.444	Cavia_aperea
ENSELUG00000010974	usb1	99	43.956	ENSCPOG00000014325	USB1	83	48.444	Cavia_porcellus
ENSELUG00000010974	usb1	88	47.347	ENSCCAG00000022132	USB1	94	46.800	Cebus_capucinus
ENSELUG00000010974	usb1	84	50.000	ENSCATG00000032174	USB1	86	50.000	Cercocebus_atys
ENSELUG00000010974	usb1	63	46.243	ENSCLAG00000007363	USB1	98	46.243	Chinchilla_lanigera
ENSELUG00000010974	usb1	84	50.000	ENSCSAG00000004783	USB1	86	50.000	Chlorocebus_sabaeus
ENSELUG00000010974	usb1	84	52.193	ENSCPBG00000026943	USB1	82	52.193	Chrysemys_picta_bellii
ENSELUG00000010974	usb1	91	47.791	ENSCANG00000037135	USB1	92	47.791	Colobus_angolensis_palliatus
ENSELUG00000010974	usb1	99	46.520	ENSCGRG00001011243	USB1	91	48.361	Cricetulus_griseus_chok1gshd
ENSELUG00000010974	usb1	99	46.520	ENSCGRG00000013252	USB1	91	48.361	Cricetulus_griseus_crigri
ENSELUG00000010974	usb1	99	56.727	ENSCSEG00000013881	usb1	91	57.540	Cynoglossus_semilaevis
ENSELUG00000010974	usb1	83	59.389	ENSCVAG00000009252	usb1	97	59.649	Cyprinodon_variegatus
ENSELUG00000010974	usb1	88	60.996	ENSDARG00000003841	usb1	86	60.996	Danio_rerio
ENSELUG00000010974	usb1	87	48.523	ENSDORG00000001888	Usb1	89	48.523	Dipodomys_ordii
ENSELUG00000010974	usb1	97	35.926	FBgn0037713	CG16790	92	35.472	Drosophila_melanogaster
ENSELUG00000010974	usb1	99	39.568	ENSETEG00000019682	USB1	87	42.308	Echinops_telfairi
ENSELUG00000010974	usb1	83	42.478	ENSEBUG00000005889	usb1	79	42.478	Eptatretus_burgeri
ENSELUG00000010974	usb1	99	46.182	ENSEASG00005005484	USB1	86	49.123	Equus_asinus_asinus
ENSELUG00000010974	usb1	99	46.350	ENSECAG00000019493	USB1	78	49.339	Equus_caballus
ENSELUG00000010974	usb1	63	45.087	ENSEEUG00000000154	USB1	65	45.087	Erinaceus_europaeus
ENSELUG00000010974	usb1	86	47.234	ENSFCAG00000002693	USB1	88	47.234	Felis_catus
ENSELUG00000010974	usb1	83	51.542	ENSFALG00000006876	USB1	85	51.542	Ficedula_albicollis
ENSELUG00000010974	usb1	99	43.750	ENSFDAG00000010052	USB1	84	48.000	Fukomys_damarensis
ENSELUG00000010974	usb1	88	55.102	ENSFHEG00000012334	usb1	82	59.223	Fundulus_heteroclitus
ENSELUG00000010974	usb1	82	64.286	ENSGMOG00000004228	usb1	99	64.286	Gadus_morhua
ENSELUG00000010974	usb1	82	51.786	ENSGALG00000035604	USB1	88	52.000	Gallus_gallus
ENSELUG00000010974	usb1	100	59.783	ENSGAFG00000021890	usb1	91	60.870	Gambusia_affinis
ENSELUG00000010974	usb1	90	60.729	ENSGACG00000003257	usb1	88	60.729	Gasterosteus_aculeatus
ENSELUG00000010974	usb1	99	47.426	ENSGAGG00000022572	USB1	83	51.316	Gopherus_agassizii
ENSELUG00000010974	usb1	88	47.755	ENSGGOG00000017147	USB1	94	47.200	Gorilla_gorilla
ENSELUG00000010974	usb1	92	65.079	ENSHBUG00000009823	usb1	89	65.079	Haplochromis_burtoni
ENSELUG00000010974	usb1	99	43.911	ENSHGLG00000016078	USB1	83	48.458	Heterocephalus_glaber_female
ENSELUG00000010974	usb1	99	43.911	ENSHGLG00100005562	USB1	83	48.458	Heterocephalus_glaber_male
ENSELUG00000010974	usb1	80	62.100	ENSHCOG00000015633	usb1	86	62.500	Hippocampus_comes
ENSELUG00000010974	usb1	100	53.979	ENSIPUG00000008601	usb1	78	62.389	Ictalurus_punctatus
ENSELUG00000010974	usb1	84	48.684	ENSSTOG00000007548	USB1	83	48.684	Ictidomys_tridecemlineatus
ENSELUG00000010974	usb1	99	47.273	ENSJJAG00000021859	Usb1	85	50.870	Jaculus_jaculus
ENSELUG00000010974	usb1	92	62.948	ENSKMAG00000007200	usb1	87	62.948	Kryptolebias_marmoratus
ENSELUG00000010974	usb1	87	60.996	ENSLBEG00000008452	usb1	75	60.996	Labrus_bergylta
ENSELUG00000010974	usb1	87	49.378	ENSLACG00000000105	USB1	69	55.276	Latimeria_chalumnae
ENSELUG00000010974	usb1	87	54.357	ENSLOCG00000000465	usb1	100	48.344	Lepisosteus_oculatus
ENSELUG00000010974	usb1	82	42.672	ENSLAFG00000002267	USB1	83	42.672	Loxodonta_africana
ENSELUG00000010974	usb1	84	50.000	ENSMFAG00000003926	USB1	86	50.000	Macaca_fascicularis
ENSELUG00000010974	usb1	84	50.000	ENSMMUG00000022669	USB1	86	50.000	Macaca_mulatta
ENSELUG00000010974	usb1	84	49.561	ENSMNEG00000042487	USB1	86	49.561	Macaca_nemestrina
ENSELUG00000010974	usb1	84	50.000	ENSMLEG00000028756	USB1	86	50.000	Mandrillus_leucophaeus
ENSELUG00000010974	usb1	99	59.353	ENSMAMG00000015092	usb1	86	63.223	Mastacembelus_armatus
ENSELUG00000010974	usb1	92	65.079	ENSMZEG00005010008	usb1	89	65.079	Maylandia_zebra
ENSELUG00000010974	usb1	99	46.237	ENSMAUG00000007832	Usb1	93	47.600	Mesocricetus_auratus
ENSELUG00000010974	usb1	84	49.561	ENSMICG00000004900	USB1	94	47.200	Microcebus_murinus
ENSELUG00000010974	usb1	99	46.763	ENSMOCG00000022647	Usb1	93	49.200	Microtus_ochrogaster
ENSELUG00000010974	usb1	83	67.699	ENSMMOG00000000490	usb1	87	67.699	Mola_mola
ENSELUG00000010974	usb1	81	48.182	ENSMODG00000014067	USB1	91	46.614	Monodelphis_domestica
ENSELUG00000010974	usb1	87	61.603	ENSMALG00000005930	usb1	83	61.603	Monopterus_albus
ENSELUG00000010974	usb1	99	45.878	MGP_CAROLIEiJ_G0031421	Usb1	99	45.133	Mus_caroli
ENSELUG00000010974	usb1	99	45.055	ENSMUSG00000031792	Usb1	99	45.133	Mus_musculus
ENSELUG00000010974	usb1	87	48.770	MGP_PahariEiJ_G0023019	Usb1	100	45.763	Mus_pahari
ENSELUG00000010974	usb1	99	46.237	MGP_SPRETEiJ_G0032540	Usb1	91	48.770	Mus_spretus
ENSELUG00000010974	usb1	86	48.291	ENSMPUG00000004684	USB1	83	48.291	Mustela_putorius_furo
ENSELUG00000010974	usb1	84	49.561	ENSMLUG00000007400	USB1	98	49.561	Myotis_lucifugus
ENSELUG00000010974	usb1	99	45.221	ENSNGAG00000009703	Usb1	84	50.000	Nannospalax_galili
ENSELUG00000010974	usb1	92	62.302	ENSNBRG00000008747	usb1	99	66.355	Neolamprologus_brichardi
ENSELUG00000010974	usb1	82	46.087	ENSNLEG00000003340	USB1	94	45.532	Nomascus_leucogenys
ENSELUG00000010974	usb1	84	35.526	ENSOPRG00000011803	USB1	98	35.526	Ochotona_princeps
ENSELUG00000010974	usb1	99	45.055	ENSODEG00000016214	USB1	85	48.246	Octodon_degus
ENSELUG00000010974	usb1	99	62.724	ENSONIG00000011063	usb1	90	65.079	Oreochromis_niloticus
ENSELUG00000010974	usb1	84	49.130	ENSOANG00000012118	USB1	95	49.130	Ornithorhynchus_anatinus
ENSELUG00000010974	usb1	86	64.407	ENSORLG00000012479	usb1	86	64.407	Oryzias_latipes
ENSELUG00000010974	usb1	86	64.407	ENSORLG00020018671	usb1	86	64.407	Oryzias_latipes_hni
ENSELUG00000010974	usb1	86	64.407	ENSORLG00015009679	usb1	87	64.407	Oryzias_latipes_hsok
ENSELUG00000010974	usb1	89	62.551	ENSOMEG00000012930	usb1	85	63.983	Oryzias_melastigma
ENSELUG00000010974	usb1	84	46.053	ENSOGAG00000003273	USB1	94	43.600	Otolemur_garnettii
ENSELUG00000010974	usb1	84	49.123	ENSOARG00000001107	USB1	87	49.123	Ovis_aries
ENSELUG00000010974	usb1	88	47.347	ENSPPAG00000042137	USB1	94	46.800	Pan_paniscus
ENSELUG00000010974	usb1	86	46.809	ENSPPRG00000024797	USB1	88	46.809	Panthera_pardus
ENSELUG00000010974	usb1	86	47.234	ENSPTIG00000007506	USB1	88	47.234	Panthera_tigris_altaica
ENSELUG00000010974	usb1	84	46.930	ENSPTRG00000008172	USB1	100	49.302	Pan_troglodytes
ENSELUG00000010974	usb1	84	50.000	ENSPANG00000025138	USB1	86	50.000	Papio_anubis
ENSELUG00000010974	usb1	85	63.675	ENSPKIG00000015109	usb1	78	63.675	Paramormyrops_kingsleyae
ENSELUG00000010974	usb1	82	41.079	ENSPSIG00000004305	USB1	100	41.079	Pelodiscus_sinensis
ENSELUG00000010974	usb1	82	61.333	ENSPMGG00000017725	usb1	96	56.471	Periophthalmus_magnuspinnatus
ENSELUG00000010974	usb1	87	48.770	ENSPEMG00000016183	Usb1	89	48.770	Peromyscus_maniculatus_bairdii
ENSELUG00000010974	usb1	86	45.957	ENSPMAG00000000462	usb1	99	45.957	Petromyzon_marinus
ENSELUG00000010974	usb1	100	60.289	ENSPFOG00000011130	usb1	91	61.660	Poecilia_formosa
ENSELUG00000010974	usb1	100	59.928	ENSPLAG00000009820	usb1	91	61.265	Poecilia_latipinna
ENSELUG00000010974	usb1	100	59.928	ENSPMEG00000006402	usb1	91	61.265	Poecilia_mexicana
ENSELUG00000010974	usb1	88	59.184	ENSPREG00000001047	usb1	89	60.633	Poecilia_reticulata
ENSELUG00000010974	usb1	78	45.581	ENSPPYG00000007401	USB1	94	43.038	Pongo_abelii
ENSELUG00000010974	usb1	84	49.123	ENSPCOG00000022612	USB1	86	49.123	Propithecus_coquereli
ENSELUG00000010974	usb1	99	41.912	ENSPVAG00000004613	USB1	94	43.852	Pteropus_vampyrus
ENSELUG00000010974	usb1	99	62.143	ENSPNYG00000022262	usb1	89	65.476	Pundamilia_nyererei
ENSELUG00000010974	usb1	89	58.436	ENSPNAG00000011736	usb1	82	58.436	Pygocentrus_nattereri
ENSELUG00000010974	usb1	99	45.520	ENSRNOG00000013216	Usb1	91	47.951	Rattus_norvegicus
ENSELUG00000010974	usb1	91	45.382	ENSRBIG00000044466	USB1	100	49.302	Rhinopithecus_bieti
ENSELUG00000010974	usb1	91	48.193	ENSRROG00000029211	USB1	92	48.193	Rhinopithecus_roxellana
ENSELUG00000010974	usb1	84	49.561	ENSSBOG00000029362	USB1	86	49.561	Saimiri_boliviensis_boliviensis
ENSELUG00000010974	usb1	80	46.575	ENSSHAG00000006993	USB1	90	47.162	Sarcophilus_harrisii
ENSELUG00000010974	usb1	85	64.957	ENSSFOG00015023663	usb1	72	65.368	Scleropages_formosus
ENSELUG00000010974	usb1	89	57.812	ENSSMAG00000015834	usb1	86	57.812	Scophthalmus_maximus
ENSELUG00000010974	usb1	82	65.625	ENSSDUG00000002949	usb1	83	65.625	Seriola_dumerili
ENSELUG00000010974	usb1	94	60.618	ENSSLDG00000014174	usb1	92	60.618	Seriola_lalandi_dorsalis
ENSELUG00000010974	usb1	79	51.628	ENSSPUG00000006741	USB1	100	51.628	Sphenodon_punctatus
ENSELUG00000010974	usb1	99	58.099	ENSSPAG00000007484	usb1	83	64.135	Stegastes_partitus
ENSELUG00000010974	usb1	99	44.853	ENSSSCG00000002807	USB1	88	47.479	Sus_scrofa
ENSELUG00000010974	usb1	77	54.502	ENSTGUG00000004792	USB1	83	54.502	Taeniopygia_guttata
ENSELUG00000010974	usb1	100	62.409	ENSTRUG00000021069	usb1	92	63.200	Takifugu_rubripes
ENSELUG00000010974	usb1	100	53.480	ENSTNIG00000000626	usb1	83	59.556	Tetraodon_nigroviridis
ENSELUG00000010974	usb1	84	35.808	ENSTBEG00000001507	USB1	98	35.808	Tupaia_belangeri
ENSELUG00000010974	usb1	84	50.000	ENSUAMG00000016823	USB1	84	50.000	Ursus_americanus
ENSELUG00000010974	usb1	79	49.302	ENSUMAG00000021369	USB1	100	49.302	Ursus_maritimus
ENSELUG00000010974	usb1	86	48.085	ENSVVUG00000023700	USB1	90	48.085	Vulpes_vulpes
ENSELUG00000010974	usb1	99	46.125	ENSXETG00000013795	usb1	97	50.813	Xenopus_tropicalis
ENSELUG00000010974	usb1	91	60.079	ENSXMAG00000024687	usb1	74	60.079	Xiphophorus_maculatus