EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000011138 (Gene tree)
Gene ID: 105031371
Gene Symbol: raly
Alias: zgc:103445
Full Name: RALY heterogeneous nuclear ribonucleoprotein
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 89974 bases
Position: chrAZJR03001029.1:104078-194051
Accession: 105031371
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000032964	RRM_1	PF00076.22	4.2e-11	1	1
ENSELUP00000010626	RRM_1	PF00076.22	5.5e-11	1	1
ENSELUP00000032984	RRM_1	PF00076.22	5.5e-11	1	1
ENSELUP00000033006	RRM_1	PF00076.22	5.5e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000001871	-	876	-	ENSELUP00000032964	291 (aa)	-	-
ENSELUT00000001753	-	2386	XM_010905745	ENSELUP00000033006	292 (aa)	XP_010904047	UPI000577DC5F
ENSELUT00000001837	-	2256	XM_010905746	ENSELUP00000010626	292 (aa)	XP_010904048	UPI000577DC5F
ENSELUT00000001821	-	2302	XM_010905748	ENSELUP00000032984	292 (aa)	XP_010904050	UPI000577DC5F

Gene Model

Click here to download ENSELUG00000011138's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000011138's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000011138	raly	95	46.801	ENSELUG00000001702	-	88	52.586
ENSELUG00000011138	raly	85	47.287	ENSELUG00000004132	-	93	40.789
ENSELUG00000011138	raly	75	50.885	ENSELUG00000007714	-	96	42.424

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000011138	raly	78	72.845	ENSG00000125970	RALY	100	89.888	Homo_sapiens
ENSELUG00000011138	raly	99	69.079	ENSAPOG00000001026	raly	98	69.967	Acanthochromis_polyacanthus
ENSELUG00000011138	raly	78	75.431	ENSAMEG00000009050	RALY	73	73.423	Ailuropoda_melanoleuca
ENSELUG00000011138	raly	79	81.545	ENSACIG00000024288	raly	84	82.488	Amphilophus_citrinellus
ENSELUG00000011138	raly	96	69.686	ENSAOCG00000009883	raly	81	72.500	Amphiprion_ocellaris
ENSELUG00000011138	raly	96	71.181	ENSAPEG00000024106	raly	82	74.021	Amphiprion_percula
ENSELUG00000011138	raly	92	70.833	ENSATEG00000004870	raly	93	69.231	Anabas_testudineus
ENSELUG00000011138	raly	95	71.986	ENSAPLG00000012983	RALY	94	71.174	Anas_platyrhynchos
ENSELUG00000011138	raly	100	68.121	ENSACAG00000008983	RALY	88	69.128	Anolis_carolinensis
ENSELUG00000011138	raly	78	72.845	ENSANAG00000019376	RALY	99	60.554	Aotus_nancymaae
ENSELUG00000011138	raly	84	80.162	ENSACLG00000007561	raly	84	72.378	Astatotilapia_calliptera
ENSELUG00000011138	raly	67	81.910	ENSBTAG00000016524	RALY	70	81.910	Bos_taurus
ENSELUG00000011138	raly	67	77.387	ENSCJAG00000009449	-	99	59.107	Callithrix_jacchus
ENSELUG00000011138	raly	78	72.845	ENSCJAG00000018361	-	99	59.794	Callithrix_jacchus
ENSELUG00000011138	raly	78	75.000	ENSCAFG00000007490	RALY	95	62.925	Canis_familiaris
ENSELUG00000011138	raly	78	75.431	ENSCAFG00020005069	RALY	95	63.265	Canis_lupus_dingo
ENSELUG00000011138	raly	78	75.862	ENSCHIG00000026609	RALY	77	72.358	Capra_hircus
ENSELUG00000011138	raly	78	73.276	ENSTSYG00000002598	RALY	99	62.191	Carlito_syrichta
ENSELUG00000011138	raly	78	63.793	ENSCAPG00000008110	RALY	94	72.864	Cavia_aperea
ENSELUG00000011138	raly	78	74.569	ENSCPOG00000000309	RALY	94	80.402	Cavia_porcellus
ENSELUG00000011138	raly	78	72.845	ENSCCAG00000024548	RALY	99	59.794	Cebus_capucinus
ENSELUG00000011138	raly	78	72.845	ENSCATG00000031769	RALY	67	78.392	Cercocebus_atys
ENSELUG00000011138	raly	78	74.138	ENSCLAG00000016899	RALY	67	80.402	Chinchilla_lanigera
ENSELUG00000011138	raly	78	72.845	ENSCSAG00000012199	RALY	68	72.558	Chlorocebus_sabaeus
ENSELUG00000011138	raly	78	67.672	ENSCHOG00000000266	RALY	92	66.822	Choloepus_hoffmanni
ENSELUG00000011138	raly	100	68.792	ENSCPBG00000019164	RALY	99	71.277	Chrysemys_picta_bellii
ENSELUG00000011138	raly	78	72.845	ENSCANG00000037952	RALY	68	78.392	Colobus_angolensis_palliatus
ENSELUG00000011138	raly	78	74.138	ENSCGRG00001014652	Raly	66	81.407	Cricetulus_griseus_chok1gshd
ENSELUG00000011138	raly	78	74.138	ENSCGRG00000011726	Raly	66	81.407	Cricetulus_griseus_crigri
ENSELUG00000011138	raly	100	76.271	ENSDARG00000059972	raly	100	76.271	Danio_rerio
ENSELUG00000011138	raly	67	79.899	ENSDNOG00000046782	-	72	79.899	Dasypus_novemcinctus
ENSELUG00000011138	raly	78	73.707	ENSDNOG00000003227	-	99	61.224	Dasypus_novemcinctus
ENSELUG00000011138	raly	68	81.500	ENSDORG00000013400	Raly	95	81.500	Dipodomys_ordii
ENSELUG00000011138	raly	78	64.935	ENSETEG00000012464	-	98	64.069	Echinops_telfairi
ENSELUG00000011138	raly	71	56.938	ENSETEG00000001919	-	63	61.979	Echinops_telfairi
ENSELUG00000011138	raly	78	75.000	ENSEASG00005008501	RALY	70	80.905	Equus_asinus_asinus
ENSELUG00000011138	raly	78	75.000	ENSECAG00000037642	-	77	71.545	Equus_caballus
ENSELUG00000011138	raly	78	75.000	ENSECAG00000012357	RALY	77	71.545	Equus_caballus
ENSELUG00000011138	raly	78	75.000	ENSECAG00000030217	-	77	71.545	Equus_caballus
ENSELUG00000011138	raly	78	62.771	ENSEEUG00000005356	RALY	99	50.993	Erinaceus_europaeus
ENSELUG00000011138	raly	78	75.000	ENSFCAG00000025252	RALY	77	71.138	Felis_catus
ENSELUG00000011138	raly	78	72.414	ENSFDAG00000010175	RALY	100	91.765	Fukomys_damarensis
ENSELUG00000011138	raly	90	73.208	ENSFHEG00000018618	raly	95	73.208	Fundulus_heteroclitus
ENSELUG00000011138	raly	79	58.190	ENSGMOG00000012589	raly	99	63.426	Gadus_morhua
ENSELUG00000011138	raly	100	70.134	ENSGALG00000033696	RALY	99	71.986	Gallus_gallus
ENSELUG00000011138	raly	81	74.262	ENSGACG00000003636	raly	95	67.509	Gasterosteus_aculeatus
ENSELUG00000011138	raly	95	70.567	ENSGAGG00000016266	RALY	83	71.277	Gopherus_agassizii
ENSELUG00000011138	raly	78	72.845	ENSGGOG00000022709	RALY	99	60.137	Gorilla_gorilla
ENSELUG00000011138	raly	68	86.000	ENSHBUG00000021321	raly	69	86.000	Haplochromis_burtoni
ENSELUG00000011138	raly	67	74.874	ENSHGLG00000021175	-	69	74.372	Heterocephalus_glaber_female
ENSELUG00000011138	raly	78	73.707	ENSHGLG00000017779	-	94	79.899	Heterocephalus_glaber_female
ENSELUG00000011138	raly	96	47.552	ENSHGLG00100000278	-	100	45.804	Heterocephalus_glaber_male
ENSELUG00000011138	raly	78	73.707	ENSHGLG00100003933	RALY	94	79.899	Heterocephalus_glaber_male
ENSELUG00000011138	raly	78	53.448	ENSHGLG00100003829	-	70	62.312	Heterocephalus_glaber_male
ENSELUG00000011138	raly	85	52.400	ENSHCOG00000012268	raly	96	51.600	Hippocampus_comes
ENSELUG00000011138	raly	78	75.000	ENSSTOG00000008810	RALY	71	75.349	Ictidomys_tridecemlineatus
ENSELUG00000011138	raly	67	81.910	ENSJJAG00000008473	Raly	94	81.910	Jaculus_jaculus
ENSELUG00000011138	raly	67	86.294	ENSKMAG00000015656	raly	80	86.294	Kryptolebias_marmoratus
ENSELUG00000011138	raly	79	80.687	ENSLBEG00000022656	raly	90	75.641	Labrus_bergylta
ENSELUG00000011138	raly	100	67.893	ENSLACG00000008596	RALY	99	68.227	Latimeria_chalumnae
ENSELUG00000011138	raly	100	80.000	ENSLOCG00000007219	raly	100	80.000	Lepisosteus_oculatus
ENSELUG00000011138	raly	78	75.431	ENSLAFG00000000321	RALY	77	68.400	Loxodonta_africana
ENSELUG00000011138	raly	78	72.845	ENSMFAG00000033131	RALY	99	60.137	Macaca_fascicularis
ENSELUG00000011138	raly	78	72.845	ENSMMUG00000018093	RALY	99	56.721	Macaca_mulatta
ENSELUG00000011138	raly	78	72.845	ENSMNEG00000044988	RALY	99	59.862	Macaca_nemestrina
ENSELUG00000011138	raly	78	72.845	ENSMLEG00000028900	RALY	68	78.392	Mandrillus_leucophaeus
ENSELUG00000011138	raly	68	87.437	ENSMAMG00000012529	raly	60	87.437	Mastacembelus_armatus
ENSELUG00000011138	raly	68	86.432	ENSMZEG00005016550	raly	65	86.432	Maylandia_zebra
ENSELUG00000011138	raly	100	63.009	ENSMGAG00000002214	RALY	100	63.009	Meleagris_gallopavo
ENSELUG00000011138	raly	67	81.407	ENSMAUG00000005739	Raly	94	81.407	Mesocricetus_auratus
ENSELUG00000011138	raly	78	75.862	ENSMICG00000039074	RALY	99	63.287	Microcebus_murinus
ENSELUG00000011138	raly	78	74.138	ENSMOCG00000009450	Raly	66	81.407	Microtus_ochrogaster
ENSELUG00000011138	raly	83	78.189	ENSMMOG00000013788	raly	100	70.545	Mola_mola
ENSELUG00000011138	raly	99	59.801	ENSMODG00000002819	-	99	59.801	Monodelphis_domestica
ENSELUG00000011138	raly	84	80.972	ENSMALG00000007071	raly	74	72.277	Monopterus_albus
ENSELUG00000011138	raly	78	73.276	MGP_CAROLIEiJ_G0024519	Raly	94	81.407	Mus_caroli
ENSELUG00000011138	raly	78	73.707	ENSMUSG00000027593	Raly	94	81.407	Mus_musculus
ENSELUG00000011138	raly	78	73.707	MGP_PahariEiJ_G0025963	Raly	94	81.407	Mus_pahari
ENSELUG00000011138	raly	78	73.707	MGP_SPRETEiJ_G0025441	Raly	94	81.407	Mus_spretus
ENSELUG00000011138	raly	78	75.000	ENSMPUG00000017820	RALY	95	62.925	Mustela_putorius_furo
ENSELUG00000011138	raly	78	75.862	ENSMLUG00000005330	-	95	63.946	Myotis_lucifugus
ENSELUG00000011138	raly	78	67.391	ENSMLUG00000027895	-	79	63.386	Myotis_lucifugus
ENSELUG00000011138	raly	67	81.407	ENSNGAG00000001263	Raly	94	81.407	Nannospalax_galili
ENSELUG00000011138	raly	68	86.500	ENSNBRG00000014761	raly	92	63.667	Neolamprologus_brichardi
ENSELUG00000011138	raly	81	53.441	ENSNLEG00000010031	-	89	52.632	Nomascus_leucogenys
ENSELUG00000011138	raly	78	72.845	ENSOPRG00000008423	RALY	75	69.106	Ochotona_princeps
ENSELUG00000011138	raly	69	53.171	ENSODEG00000011160	-	70	63.372	Octodon_degus
ENSELUG00000011138	raly	78	69.828	ENSODEG00000008369	-	99	54.817	Octodon_degus
ENSELUG00000011138	raly	78	59.565	ENSODEG00000012831	-	100	69.543	Octodon_degus
ENSELUG00000011138	raly	99	69.707	ENSONIG00000004416	raly	100	71.192	Oreochromis_niloticus
ENSELUG00000011138	raly	78	74.569	ENSOCUG00000000477	RALY	62	70.732	Oryctolagus_cuniculus
ENSELUG00000011138	raly	78	73.707	ENSOGAG00000032337	RALY	73	69.512	Otolemur_garnettii
ENSELUG00000011138	raly	78	75.862	ENSOARG00000008957	RALY	77	72.358	Ovis_aries
ENSELUG00000011138	raly	78	72.845	ENSPPAG00000034951	RALY	99	59.727	Pan_paniscus
ENSELUG00000011138	raly	78	75.000	ENSPPRG00000014593	RALY	71	80.905	Panthera_pardus
ENSELUG00000011138	raly	78	75.000	ENSPTIG00000021910	RALY	71	80.905	Panthera_tigris_altaica
ENSELUG00000011138	raly	78	72.845	ENSPTRG00000013410	RALY	68	78.392	Pan_troglodytes
ENSELUG00000011138	raly	78	72.845	ENSPANG00000018093	RALY	68	78.392	Papio_anubis
ENSELUG00000011138	raly	100	78.644	ENSPKIG00000004894	raly	100	78.644	Paramormyrops_kingsleyae
ENSELUG00000011138	raly	95	63.140	ENSPSIG00000017714	RALY	95	63.823	Pelodiscus_sinensis
ENSELUG00000011138	raly	67	81.407	ENSPEMG00000021466	Raly	70	81.407	Peromyscus_maniculatus_bairdii
ENSELUG00000011138	raly	99	62.925	ENSPCIG00000011153	-	99	62.925	Phascolarctos_cinereus
ENSELUG00000011138	raly	78	72.845	ENSPPYG00000010932	RALY	99	57.807	Pongo_abelii
ENSELUG00000011138	raly	78	62.069	ENSPCAG00000016867	RALY	72	68.837	Procavia_capensis
ENSELUG00000011138	raly	78	74.569	ENSPCOG00000016363	RALY	71	81.407	Propithecus_coquereli
ENSELUG00000011138	raly	78	74.569	ENSPVAG00000015827	RALY	95	62.585	Pteropus_vampyrus
ENSELUG00000011138	raly	68	85.930	ENSPNYG00000011247	raly	65	85.930	Pundamilia_nyererei
ENSELUG00000011138	raly	100	74.915	ENSPNAG00000011812	raly	100	74.915	Pygocentrus_nattereri
ENSELUG00000011138	raly	78	73.276	ENSRNOG00000017405	Raly	67	81.407	Rattus_norvegicus
ENSELUG00000011138	raly	78	73.276	ENSRBIG00000030203	RALY	67	78.894	Rhinopithecus_bieti
ENSELUG00000011138	raly	78	73.276	ENSRROG00000038781	RALY	67	78.894	Rhinopithecus_roxellana
ENSELUG00000011138	raly	78	72.845	ENSSBOG00000001418	RALY	68	78.392	Saimiri_boliviensis_boliviensis
ENSELUG00000011138	raly	99	53.583	ENSSHAG00000016830	RALY	85	67.755	Sarcophilus_harrisii
ENSELUG00000011138	raly	95	79.643	ENSSFOG00015012304	raly	99	79.643	Scleropages_formosus
ENSELUG00000011138	raly	90	74.627	ENSSMAG00000001107	raly	92	72.318	Scophthalmus_maximus
ENSELUG00000011138	raly	85	81.673	ENSSDUG00000002411	raly	99	73.139	Seriola_dumerili
ENSELUG00000011138	raly	85	80.876	ENSSLDG00000017872	raly	97	71.711	Seriola_lalandi_dorsalis
ENSELUG00000011138	raly	77	58.772	ENSSARG00000002763	-	69	64.455	Sorex_araneus
ENSELUG00000011138	raly	95	70.922	ENSSPUG00000006251	RALY	98	70.922	Sphenodon_punctatus
ENSELUG00000011138	raly	72	77.143	ENSSPAG00000022480	-	87	67.532	Stegastes_partitus
ENSELUG00000011138	raly	78	75.862	ENSSSCG00000007275	RALY	64	81.910	Sus_scrofa
ENSELUG00000011138	raly	78	77.826	ENSTGUG00000003715	RALY	99	77.826	Taeniopygia_guttata
ENSELUG00000011138	raly	67	64.186	ENSTBEG00000009812	RALY	60	90.588	Tupaia_belangeri
ENSELUG00000011138	raly	78	73.478	ENSTTRG00000006590	RALY	77	69.512	Tursiops_truncatus
ENSELUG00000011138	raly	78	75.431	ENSUAMG00000006993	RALY	97	63.265	Ursus_americanus
ENSELUG00000011138	raly	78	75.431	ENSUMAG00000024106	RALY	95	63.265	Ursus_maritimus
ENSELUG00000011138	raly	64	69.312	ENSVPAG00000000373	RALY	58	75.723	Vicugna_pacos
ENSELUG00000011138	raly	78	75.431	ENSVVUG00000004546	RALY	95	63.265	Vulpes_vulpes
ENSELUG00000011138	raly	95	62.838	ENSXETG00000019514	raly	97	62.838	Xenopus_tropicalis