EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000011680 (Gene tree)
Gene ID: 105024135
Gene Symbol: zgc:171927
Alias: -
Full Name: ras-related protein Rab-1A-like
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 1876 bases
Position: chrLG01:12682109-12683984
Accession: 105024135
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000011291	MMR_HSR1	PF01926.23	6.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000000707	-	636	XM_010893857	ENSELUP00000011291	211 (aa)	XP_010892159	-

Gene Model

Click here to download ENSELUG00000011680's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000011680's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000011680	zgc:171927	89	45.503	ENSELUG00000021148	rab11bb	87	45.503
ENSELUG00000011680	zgc:171927	81	51.176	ENSELUG00000002999	rab11a	90	55.385
ENSELUG00000011680	zgc:171927	87	46.524	ENSELUG00000003805	rab18a	91	46.524
ENSELUG00000011680	zgc:171927	77	63.580	ENSELUG00000023972	rab35	80	63.580
ENSELUG00000011680	zgc:171927	78	34.337	ENSELUG00000006480	rheb	90	34.337
ENSELUG00000011680	zgc:171927	96	36.946	ENSELUG00000015343	rab22a	94	38.919
ENSELUG00000011680	zgc:171927	92	78.351	ENSELUG00000012428	-	96	78.351
ENSELUG00000011680	zgc:171927	77	44.172	ENSELUG00000013436	rab5ab	75	44.172
ENSELUG00000011680	zgc:171927	98	40.191	ENSELUG00000006604	rab25a	82	43.678
ENSELUG00000011680	zgc:171927	83	51.429	ENSELUG00000022997	rab30	87	51.429
ENSELUG00000011680	zgc:171927	99	40.284	ENSELUG00000014785	rab4a	91	41.753
ENSELUG00000011680	zgc:171927	90	43.158	ENSELUG00000013571	-	88	43.158
ENSELUG00000011680	zgc:171927	77	33.742	ENSELUG00000018367	rheb	88	33.742
ENSELUG00000011680	zgc:171927	55	33.051	ENSELUG00000010736	arl8a	61	33.051
ENSELUG00000011680	zgc:171927	85	45.902	ENSELUG00000013957	-	86	45.902
ENSELUG00000011680	zgc:171927	78	37.278	ENSELUG00000000175	zgc:100918	82	37.278
ENSELUG00000011680	zgc:171927	82	41.622	ENSELUG00000002575	rab33ba	77	41.622
ENSELUG00000011680	zgc:171927	92	45.685	ENSELUG00000005989	RAB15	91	45.685
ENSELUG00000011680	zgc:171927	78	36.979	ENSELUG00000011352	-	78	36.500
ENSELUG00000011680	zgc:171927	77	33.929	ENSELUG00000013666	si:cabz01085950.1	82	33.929
ENSELUG00000011680	zgc:171927	75	36.478	ENSELUG00000020788	rab23	76	34.637
ENSELUG00000011680	zgc:171927	80	50.296	ENSELUG00000020012	rab15	80	50.296
ENSELUG00000011680	zgc:171927	75	40.994	ENSELUG00000022157	rab34a	61	40.994
ENSELUG00000011680	zgc:171927	99	36.916	ENSELUG00000010345	rab42a	99	36.916
ENSELUG00000011680	zgc:171927	82	32.759	ENSELUG00000016028	rhebl1	93	32.759
ENSELUG00000011680	zgc:171927	77	44.785	ENSELUG00000006462	rab5aa	75	44.785
ENSELUG00000011680	zgc:171927	77	37.143	ENSELUG00000004378	rab9b	82	37.725
ENSELUG00000011680	zgc:171927	77	35.366	ENSELUG00000004712	HRAS	86	35.366
ENSELUG00000011680	zgc:171927	90	38.947	ENSELUG00000001257	rab6ba	85	38.947
ENSELUG00000011680	zgc:171927	79	51.497	ENSELUG00000016450	rab18b	81	51.497
ENSELUG00000011680	zgc:171927	78	35.758	ENSELUG00000003058	KRAS	86	35.976
ENSELUG00000011680	zgc:171927	76	40.994	ENSELUG00000008876	rab6a	77	40.373
ENSELUG00000011680	zgc:171927	75	42.857	ENSELUG00000018921	rab36	61	42.857
ENSELUG00000011680	zgc:171927	82	50.000	ENSELUG00000019240	-	88	50.000
ENSELUG00000011680	zgc:171927	55	32.203	ENSELUG00000003770	arl8a	61	32.203
ENSELUG00000011680	zgc:171927	73	37.107	ENSELUG00000016622	rab9a	79	37.107
ENSELUG00000011680	zgc:171927	78	50.303	ENSELUG00000007123	rab12	69	50.303
ENSELUG00000011680	zgc:171927	77	43.558	ENSELUG00000018516	rab5c	75	43.558
ENSELUG00000011680	zgc:171927	77	42.945	ENSELUG00000010439	-	74	42.945
ENSELUG00000011680	zgc:171927	75	39.130	ENSELUG00000005597	rab34b	62	39.130
ENSELUG00000011680	zgc:171927	90	43.684	ENSELUG00000009832	rab14	88	43.684
ENSELUG00000011680	zgc:171927	80	49.704	ENSELUG00000023964	rab2a	80	49.704
ENSELUG00000011680	zgc:171927	98	41.546	ENSELUG00000012060	rab25b	82	44.828
ENSELUG00000011680	zgc:171927	85	47.222	ENSELUG00000000916	-	96	54.135
ENSELUG00000011680	zgc:171927	78	37.278	ENSELUG00000006539	RAB7A	82	37.278
ENSELUG00000011680	zgc:171927	55	30.252	ENSELUG00000004400	arl4cb	61	30.252
ENSELUG00000011680	zgc:171927	56	31.667	ENSELUG00000009390	arl8ba	62	31.667
ENSELUG00000011680	zgc:171927	92	77.320	ENSELUG00000023815	-	96	77.320
ENSELUG00000011680	zgc:171927	58	31.783	ENSELUG00000023460	-	62	31.783
ENSELUG00000011680	zgc:171927	80	55.621	ENSELUG00000012801	rab13	85	55.621
ENSELUG00000011680	zgc:171927	76	40.373	ENSELUG00000022470	rab6bb	77	40.373
ENSELUG00000011680	zgc:171927	78	35.329	ENSELUG00000005090	si:ch73-116o1.2	70	35.329
ENSELUG00000011680	zgc:171927	94	78.283	ENSELUG00000015413	rab1ab	98	78.680
ENSELUG00000011680	zgc:171927	68	30.345	ENSELUG00000013130	-	73	30.345
ENSELUG00000011680	zgc:171927	78	34.731	ENSELUG00000017558	mras	80	34.731
ENSELUG00000011680	zgc:171927	99	44.019	ENSELUG00000012035	rab11al	77	51.205
ENSELUG00000011680	zgc:171927	76	41.975	ENSELUG00000023120	-	76	41.975
ENSELUG00000011680	zgc:171927	72	31.579	ENSELUG00000008604	rras2	81	32.317
ENSELUG00000011680	zgc:171927	57	30.827	ENSELUG00000013412	arfrp1	65	30.827
ENSELUG00000011680	zgc:171927	99	42.991	ENSELUG00000020948	-	96	55.200
ENSELUG00000011680	zgc:171927	78	37.278	ENSELUG00000016682	-	82	37.278
ENSELUG00000011680	zgc:171927	79	60.241	ENSELUG00000023247	si:dkey-16l2.16	79	60.241
ENSELUG00000011680	zgc:171927	88	34.555	ENSELUG00000021199	RAB9A	88	34.555
ENSELUG00000011680	zgc:171927	84	43.784	ENSELUG00000013219	rab33a	70	45.238
ENSELUG00000011680	zgc:171927	94	76.238	ENSELUG00000012166	RAB1A	94	76.617
ENSELUG00000011680	zgc:171927	91	44.103	ENSELUG00000005304	rab39ba	92	44.103

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000011680	zgc:171927	100	78.704	ENSAPOG00000004980	-	94	82.178	Acanthochromis_polyacanthus
ENSELUG00000011680	zgc:171927	100	79.630	ENSACIG00000009006	zgc:171927	100	79.630	Amphilophus_citrinellus
ENSELUG00000011680	zgc:171927	72	83.226	ENSAOCG00000013808	-	93	92.562	Amphiprion_ocellaris
ENSELUG00000011680	zgc:171927	99	77.209	ENSAOCG00000024149	-	94	79.703	Amphiprion_ocellaris
ENSELUG00000011680	zgc:171927	99	78.605	ENSAPEG00000022171	zgc:171927	96	81.500	Amphiprion_percula
ENSELUG00000011680	zgc:171927	100	77.523	ENSATEG00000003430	zgc:171927	94	81.373	Anabas_testudineus
ENSELUG00000011680	zgc:171927	100	79.439	ENSACLG00000013734	-	100	79.439	Astatotilapia_calliptera
ENSELUG00000011680	zgc:171927	100	83.886	ENSAMXG00000039486	zgc:171927	100	83.886	Astyanax_mexicanus
ENSELUG00000011680	zgc:171927	100	77.778	ENSCSEG00000014416	zgc:171927	95	81.188	Cynoglossus_semilaevis
ENSELUG00000011680	zgc:171927	100	77.778	ENSCVAG00000009222	zgc:171927	94	81.683	Cyprinodon_variegatus
ENSELUG00000011680	zgc:171927	100	86.256	ENSDARG00000033056	zgc:171927	100	85.782	Danio_rerio
ENSELUG00000011680	zgc:171927	99	78.605	ENSFHEG00000022176	zgc:171927	94	81.683	Fundulus_heteroclitus
ENSELUG00000011680	zgc:171927	98	74.519	ENSGMOG00000004979	-	97	74.519	Gadus_morhua
ENSELUG00000011680	zgc:171927	98	78.199	ENSGAFG00000015702	zgc:171927	84	78.199	Gambusia_affinis
ENSELUG00000011680	zgc:171927	99	79.070	ENSGACG00000013401	zgc:171927	89	87.500	Gasterosteus_aculeatus
ENSELUG00000011680	zgc:171927	100	79.439	ENSHBUG00000002397	-	100	79.439	Haplochromis_burtoni
ENSELUG00000011680	zgc:171927	99	78.605	ENSKMAG00000009856	zgc:171927	94	81.188	Kryptolebias_marmoratus
ENSELUG00000011680	zgc:171927	98	78.673	ENSLBEG00000027226	-	89	78.673	Labrus_bergylta
ENSELUG00000011680	zgc:171927	100	79.630	ENSLBEG00000005791	-	100	79.630	Labrus_bergylta
ENSELUG00000011680	zgc:171927	98	77.184	ENSLOCG00000014692	zgc:171927	96	77.184	Lepisosteus_oculatus
ENSELUG00000011680	zgc:171927	100	77.778	ENSMAMG00000020135	zgc:171927	100	77.778	Mastacembelus_armatus
ENSELUG00000011680	zgc:171927	100	79.439	ENSMZEG00005024685	-	100	79.439	Maylandia_zebra
ENSELUG00000011680	zgc:171927	100	75.926	ENSMMOG00000009833	-	100	75.926	Mola_mola
ENSELUG00000011680	zgc:171927	100	78.404	ENSMALG00000021129	zgc:171927	94	81.910	Monopterus_albus
ENSELUG00000011680	zgc:171927	100	78.972	ENSNBRG00000006202	zgc:171927	100	78.972	Neolamprologus_brichardi
ENSELUG00000011680	zgc:171927	99	78.972	ENSORLG00000000602	zgc:171927	94	82.090	Oryzias_latipes
ENSELUG00000011680	zgc:171927	99	78.972	ENSORLG00020021071	zgc:171927	94	82.090	Oryzias_latipes_hni
ENSELUG00000011680	zgc:171927	99	77.103	ENSORLG00015010098	zgc:171927	94	80.100	Oryzias_latipes_hsok
ENSELUG00000011680	zgc:171927	99	79.070	ENSOMEG00000020594	zgc:171927	94	82.178	Oryzias_melastigma
ENSELUG00000011680	zgc:171927	100	79.167	ENSPFOG00000013810	zgc:171927	99	79.167	Poecilia_formosa
ENSELUG00000011680	zgc:171927	100	78.704	ENSPLAG00000005869	zgc:171927	100	78.704	Poecilia_latipinna
ENSELUG00000011680	zgc:171927	100	79.167	ENSPMEG00000022350	zgc:171927	100	79.167	Poecilia_mexicana
ENSELUG00000011680	zgc:171927	100	79.630	ENSPREG00000017517	zgc:171927	100	79.630	Poecilia_reticulata
ENSELUG00000011680	zgc:171927	100	79.439	ENSPNYG00000007520	-	100	79.439	Pundamilia_nyererei
ENSELUG00000011680	zgc:171927	100	85.308	ENSPNAG00000029574	zgc:171927	100	85.308	Pygocentrus_nattereri
ENSELUG00000011680	zgc:171927	100	86.256	ENSSFOG00015005464	zgc:171927	99	86.256	Scleropages_formosus
ENSELUG00000011680	zgc:171927	100	78.704	ENSSMAG00000004416	-	94	82.178	Scophthalmus_maximus
ENSELUG00000011680	zgc:171927	100	79.630	ENSSDUG00000004445	zgc:171927	100	79.630	Seriola_dumerili
ENSELUG00000011680	zgc:171927	100	79.630	ENSSLDG00000018024	zgc:171927	100	79.630	Seriola_lalandi_dorsalis
ENSELUG00000011680	zgc:171927	100	78.704	ENSSPAG00000013533	zgc:171927	94	82.178	Stegastes_partitus
ENSELUG00000011680	zgc:171927	100	78.704	ENSXCOG00000010695	zgc:171927	100	78.704	Xiphophorus_couchianus
ENSELUG00000011680	zgc:171927	100	78.704	ENSXMAG00000004683	zgc:171927	100	78.704	Xiphophorus_maculatus