EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSELUG00000011747 (Gene tree)
Gene ID
105028669
Gene Symbol
msi2a
Alias
-
Full Name
RNA-binding protein Musashi homolog 2
Gene Type
protein_coding
Species
Esox_lucius
Status
putative
Strand
Plus strand
Length
232799 bases
Position
chrLG07:14053146-14285944
Accession
105028669
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSELUP00000011305RRM_1PF00076.224.3e-3412
ENSELUP00000011305RRM_1PF00076.224.3e-3422
ENSELUP00000033448RRM_1PF00076.228.8e-3412
ENSELUP00000033448RRM_1PF00076.228.8e-3422
ENSELUP00000011336RRM_1PF00076.228.8e-3412
ENSELUP00000011336RRM_1PF00076.228.8e-3422
ENSELUP00000033435RRM_1PF00076.221.2e-3312
ENSELUP00000033435RRM_1PF00076.221.2e-3322
ENSELUP00000033503RRM_1PF00076.221.2e-3312
ENSELUP00000033503RRM_1PF00076.221.2e-3322
ENSELUP00000033466RRM_1PF00076.221.4e-2912
ENSELUP00000033466RRM_1PF00076.221.4e-2922
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSELUT00000000676-1469-ENSELUP00000033435427 (aa)--
ENSELUT00000000572-1448XM_010901558ENSELUP00000033503431 (aa)XP_010899860-
ENSELUT00000000629-1346-ENSELUP00000011336386 (aa)-UPI00057607CA
ENSELUT00000000614-942XM_010901564ENSELUP00000033466313 (aa)XP_010899866-
ENSELUT00000000685-2931-ENSELUP00000011305294 (aa)--
ENSELUT00000000658-1372-ENSELUP00000033448385 (aa)--
Gene Model
Click here to download ENSELUG00000011747's gene model file
Pathways
Pathway IDPathway NameSource
els03015mRNA surveillance pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000011747's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSELUG00000011747msi2a6838.650ENSELUG00000014407-9639.490
ENSELUG00000011747msi2a5749.704ENSELUG00000003241hnrnpdl8439.777
ENSELUG00000011747msi2a5838.953ENSELUG00000014398-8234.711
ENSELUG00000011747msi2a5750.000ENSELUG00000003230hnrnpd8941.636
ENSELUG00000011747msi2a5941.279ENSELUG00000007372-6535.052
ENSELUG00000011747msi2a9473.139ENSELUG00000023280-10073.139
ENSELUG00000011747msi2a6241.989ENSELUG00000020089-9338.542
ENSELUG00000011747msi2a5750.888ENSELUG00000015443hnrnpaba7644.000
ENSELUG00000011747msi2a6442.254ENSELUG00000003600rbmx5042.254
ENSELUG00000011747msi2a5145.333ENSELUG00000004675-8045.946
ENSELUG00000011747msi2a5531.325ENSELUG00000016800slirp9931.325
ENSELUG00000011747msi2a5749.704ENSELUG00000020765hnrnpabb7444.954
ENSELUG00000011747msi2a5830.120ENSELUG00000005247-7330.120
ENSELUG00000011747msi2a7642.308ENSELUG00000010286dazap17141.772
ENSELUG00000011747msi2a5836.486ENSELUG00000013252tardbpl6736.486
ENSELUG00000011747msi2a9467.463ENSELUG00000023219MSI19267.463
ENSELUG00000011747msi2a6339.891ENSELUG00000023080hnrnpa37835.652
ENSELUG00000011747msi2a9793.834ENSELUG00000001361msi2b9793.717
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSELUG00000011747msi2a10089.329ENSG00000153944MSI29694.167Homo_sapiens
ENSELUG00000011747msi2a10095.208ENSAPOG00000001658msi2a10095.208Acanthochromis_polyacanthus
ENSELUG00000011747msi2a9389.032ENSAMEG00000002697MSI29989.032Ailuropoda_melanoleuca
ENSELUG00000011747msi2a9791.033ENSACIG00000009475msi2a9790.489Amphilophus_citrinellus
ENSELUG00000011747msi2a5688.889ENSAOCG00000014822msi2a6988.889Amphiprion_ocellaris
ENSELUG00000011747msi2a10095.208ENSAPEG00000007706msi2a10095.208Amphiprion_percula
ENSELUG00000011747msi2a10095.208ENSATEG00000010498msi2a10095.208Anabas_testudineus
ENSELUG00000011747msi2a9394.245ENSATEG00000003301-10094.245Anabas_testudineus
ENSELUG00000011747msi2a9392.925ENSACAG00000005452MSI28881.408Anolis_carolinensis
ENSELUG00000011747msi2a10089.329ENSANAG00000037827MSI29694.167Aotus_nancymaae
ENSELUG00000011747msi2a10094.888ENSACLG00000007752msi2a10094.888Astatotilapia_calliptera
ENSELUG00000011747msi2a9695.664ENSAMXG00000032796msi2a9795.491Astyanax_mexicanus
ENSELUG00000011747msi2a10096.166ENSAMXG00000010474msi2b10096.166Astyanax_mexicanus
ENSELUG00000011747msi2a9394.178ENSBTAG00000004406MSI29794.178Bos_taurus
ENSELUG00000011747msi2a7262.719WBGene00003423msi-17362.931Caenorhabditis_elegans
ENSELUG00000011747msi2a10089.329ENSCJAG00000013998MSI29694.167Callithrix_jacchus
ENSELUG00000011747msi2a9388.997ENSCAFG00020025620MSI28189.032Canis_lupus_dingo
ENSELUG00000011747msi2a10088.110ENSCHIG00000016580MSI210088.110Capra_hircus
ENSELUG00000011747msi2a9389.716ENSCPOG00000034042MSI29989.716Cavia_porcellus
ENSELUG00000011747msi2a10089.329ENSCCAG00000033927MSI29694.167Cebus_capucinus
ENSELUG00000011747msi2a9393.333ENSCATG00000040879MSI29694.167Cercocebus_atys
ENSELUG00000011747msi2a10084.682ENSCLAG00000014325MSI210084.682Chinchilla_lanigera
ENSELUG00000011747msi2a10089.329ENSCSAG00000005633MSI210089.329Chlorocebus_sabaeus
ENSELUG00000011747msi2a8966.308ENSCHOG00000008660MSI28086.047Choloepus_hoffmanni
ENSELUG00000011747msi2a9397.044ENSCPBG00000009942MSI29587.640Chrysemys_picta_bellii
ENSELUG00000011747msi2a7270.635ENSCING00000018579-9752.466Ciona_intestinalis
ENSELUG00000011747msi2a6968.932ENSCSAVG00000010397-9453.952Ciona_savignyi
ENSELUG00000011747msi2a9393.333ENSCANG00000036414MSI29694.167Colobus_angolensis_palliatus
ENSELUG00000011747msi2a10088.754ENSCGRG00001013330Msi210088.754Cricetulus_griseus_chok1gshd
ENSELUG00000011747msi2a9388.746ENSCGRG00000003141Msi210088.746Cricetulus_griseus_crigri
ENSELUG00000011747msi2a6169.714ENSCSEG00000013549msi2a10075.956Cynoglossus_semilaevis
ENSELUG00000011747msi2a8175.773ENSCSEG00000013557msi2a8374.742Cynoglossus_semilaevis
ENSELUG00000011747msi2a10081.173ENSCSEG00000003266-10081.173Cynoglossus_semilaevis
ENSELUG00000011747msi2a9695.318ENSCVAG00000017075msi2a9995.318Cyprinodon_variegatus
ENSELUG00000011747msi2a9793.625ENSDARG00000032614msi2b100100.000Danio_rerio
ENSELUG00000011747msi2a9988.281ENSDARG00000033901msi2a9790.426Danio_rerio
ENSELUG00000011747msi2a9394.444ENSDNOG00000014501MSI210094.444Dasypus_novemcinctus
ENSELUG00000011747msi2a5798.230ENSDORG00000028440-10098.230Dipodomys_ordii
ENSELUG00000011747msi2a8182.741ENSDORG00000005394Msi28189.286Dipodomys_ordii
ENSELUG00000011747msi2a9454.622FBgn0260943Rbp68966.438Drosophila_melanogaster
ENSELUG00000011747msi2a7773.684ENSETEG00000012450-6473.684Echinops_telfairi
ENSELUG00000011747msi2a9364.217ENSEBUG00000006732msi2a8763.898Eptatretus_burgeri
ENSELUG00000011747msi2a9391.639ENSEASG00005002965MSI29893.607Equus_asinus_asinus
ENSELUG00000011747msi2a9392.609ENSECAG00000011435MSI210082.486Equus_caballus
ENSELUG00000011747msi2a8678.656ENSEEUG00000007810MSI210078.656Erinaceus_europaeus
ENSELUG00000011747msi2a10089.329ENSFCAG00000041686MSI29694.167Felis_catus
ENSELUG00000011747msi2a5581.538ENSFCAG00000033787-8276.923Felis_catus
ENSELUG00000011747msi2a9389.032ENSFDAG00000016118MSI210089.032Fukomys_damarensis
ENSELUG00000011747msi2a10095.208ENSFHEG00000000084msi2a10095.208Fundulus_heteroclitus
ENSELUG00000011747msi2a5988.542ENSGMOG00000007596-10096.154Gadus_morhua
ENSELUG00000011747msi2a10084.104ENSGALG00000005567MSI210084.104Gallus_gallus
ENSELUG00000011747msi2a9687.171ENSGAFG00000006974msi2a9097.351Gambusia_affinis
ENSELUG00000011747msi2a10089.811ENSGAGG00000016542MSI210086.184Gopherus_agassizii
ENSELUG00000011747msi2a9393.333ENSGGOG00000013182MSI29694.167Gorilla_gorilla
ENSELUG00000011747msi2a10094.888ENSHBUG00000020800msi2a10094.888Haplochromis_burtoni
ENSELUG00000011747msi2a10075.723ENSHGLG00000012444MSI210075.723Heterocephalus_glaber_female
ENSELUG00000011747msi2a7884.541ENSHGLG00100003744MSI210084.541Heterocephalus_glaber_male
ENSELUG00000011747msi2a5798.246ENSHGLG00100004028-8798.246Heterocephalus_glaber_male
ENSELUG00000011747msi2a9584.375ENSHCOG00000017241-9870.720Hippocampus_comes
ENSELUG00000011747msi2a9791.235ENSHCOG00000000266msi2a9789.594Hippocampus_comes
ENSELUG00000011747msi2a10093.930ENSIPUG00000021097msi2a10094.249Ictalurus_punctatus
ENSELUG00000011747msi2a10092.013ENSIPUG00000003732msi2b10092.013Ictalurus_punctatus
ENSELUG00000011747msi2a9389.716ENSSTOG00000007884MSI29989.716Ictidomys_tridecemlineatus
ENSELUG00000011747msi2a7879.397ENSJJAG00000006292-10078.894Jaculus_jaculus
ENSELUG00000011747msi2a5798.230ENSJJAG00000009467-10098.230Jaculus_jaculus
ENSELUG00000011747msi2a9694.293ENSKMAG00000009494msi2a9694.400Kryptolebias_marmoratus
ENSELUG00000011747msi2a10095.208ENSLBEG00000007061msi2a10095.208Labrus_bergylta
ENSELUG00000011747msi2a9387.383ENSLBEG00000026223-10077.193Labrus_bergylta
ENSELUG00000011747msi2a6392.079ENSLACG00000016798MSI29895.604Latimeria_chalumnae
ENSELUG00000011747msi2a9695.109ENSLOCG00000004675msi2b9795.213Lepisosteus_oculatus
ENSELUG00000011747msi2a9393.333ENSMFAG00000003775MSI29694.167Macaca_fascicularis
ENSELUG00000011747msi2a9393.333ENSMMUG00000002069MSI29694.167Macaca_mulatta
ENSELUG00000011747msi2a10089.329ENSMNEG00000045275MSI29694.167Macaca_nemestrina
ENSELUG00000011747msi2a9393.333ENSMLEG00000033888MSI29694.167Mandrillus_leucophaeus
ENSELUG00000011747msi2a10094.586ENSMAMG00000010503msi2a10094.586Mastacembelus_armatus
ENSELUG00000011747msi2a10091.374ENSMAMG00000002488-9996.689Mastacembelus_armatus
ENSELUG00000011747msi2a10094.888ENSMZEG00005007676msi2a10094.888Maylandia_zebra
ENSELUG00000011747msi2a10084.150ENSMAUG00000003862Msi210084.150Mesocricetus_auratus
ENSELUG00000011747msi2a10089.329ENSMICG00000013598-9694.167Microcebus_murinus
ENSELUG00000011747msi2a10069.369ENSMICG00000032913-8883.929Microcebus_murinus
ENSELUG00000011747msi2a10084.393ENSMOCG00000005820Msi210084.393Microtus_ochrogaster
ENSELUG00000011747msi2a9681.977ENSMMOG00000008348msi2a9097.080Mola_mola
ENSELUG00000011747msi2a7884.058ENSMODG00000014790MSI210084.058Monodelphis_domestica
ENSELUG00000011747msi2a9696.970ENSMALG00000000071msi2a9596.732Monopterus_albus
ENSELUG00000011747msi2a10089.024MGP_CAROLIEiJ_G0016948Msi210098.230Mus_caroli
ENSELUG00000011747msi2a10089.024ENSMUSG00000069769Msi210098.230Mus_musculus
ENSELUG00000011747msi2a10089.024MGP_PahariEiJ_G0018079Msi210098.230Mus_pahari
ENSELUG00000011747msi2a10089.024MGP_SPRETEiJ_G0017795Msi210098.230Mus_spretus
ENSELUG00000011747msi2a9394.521ENSMPUG00000015377MSI29794.521Mustela_putorius_furo
ENSELUG00000011747msi2a9394.521ENSMLUG00000007865MSI29794.521Myotis_lucifugus
ENSELUG00000011747msi2a10084.393ENSNGAG00000017807Msi210084.393Nannospalax_galili
ENSELUG00000011747msi2a10094.888ENSNBRG00000014596msi2a10094.888Neolamprologus_brichardi
ENSELUG00000011747msi2a9393.333ENSNLEG00000008059MSI29695.261Nomascus_leucogenys
ENSELUG00000011747msi2a7785.526ENSOPRG00000000872-6485.526Ochotona_princeps
ENSELUG00000011747msi2a10084.682ENSODEG00000011974MSI210084.682Octodon_degus
ENSELUG00000011747msi2a6290.909ENSONIG00000001972msi2a8497.351Oreochromis_niloticus
ENSELUG00000011747msi2a8897.596ENSOANG00000005667MSI29975.708Ornithorhynchus_anatinus
ENSELUG00000011747msi2a9394.521ENSOCUG00000010440MSI29794.521Oryctolagus_cuniculus
ENSELUG00000011747msi2a10092.971ENSORLG00000009671msi2a10092.971Oryzias_latipes
ENSELUG00000011747msi2a10092.971ENSORLG00020021556msi2a10092.971Oryzias_latipes_hni
ENSELUG00000011747msi2a10092.971ENSORLG00015004592msi2a10092.971Oryzias_latipes_hsok
ENSELUG00000011747msi2a9694.837ENSOMEG00000000146msi2a9995.205Oryzias_melastigma
ENSELUG00000011747msi2a9390.411ENSOGAG00000005621MSI29990.411Otolemur_garnettii
ENSELUG00000011747msi2a9389.032ENSPPAG00000037697MSI29694.167Pan_paniscus
ENSELUG00000011747msi2a9394.521ENSPPRG00000001848MSI29694.167Panthera_pardus
ENSELUG00000011747msi2a9389.032ENSPTIG00000021678MSI29689.032Panthera_tigris_altaica
ENSELUG00000011747msi2a8275.833ENSPTIG00000021873-9376.050Panthera_tigris_altaica
ENSELUG00000011747msi2a9393.333ENSPTRG00000009437MSI29694.167Pan_troglodytes
ENSELUG00000011747msi2a10089.329ENSPANG00000022319MSI29694.167Papio_anubis
ENSELUG00000011747msi2a9686.984ENSPKIG00000007038-8995.062Paramormyrops_kingsleyae
ENSELUG00000011747msi2a10091.667ENSPSIG00000008618MSI29786.041Pelodiscus_sinensis
ENSELUG00000011747msi2a10095.208ENSPMGG00000005888msi2a10095.208Periophthalmus_magnuspinnatus
ENSELUG00000011747msi2a5798.230ENSPEMG00000021793-10098.230Peromyscus_maniculatus_bairdii
ENSELUG00000011747msi2a10083.333ENSPCIG00000006063MSI210083.333Phascolarctos_cinereus
ENSELUG00000011747msi2a6186.598ENSPFOG00000019337MSI29296.190Poecilia_formosa
ENSELUG00000011747msi2a6286.667ENSPLAG00000000436msi2a7694.366Poecilia_latipinna
ENSELUG00000011747msi2a5692.969ENSPMEG00000013247msi2a8092.969Poecilia_mexicana
ENSELUG00000011747msi2a9992.971ENSPREG00000000881msi2a9992.971Poecilia_reticulata
ENSELUG00000011747msi2a9390.756ENSPPYG00000008244-10090.756Pongo_abelii
ENSELUG00000011747msi2a7665.126ENSPCAG00000010552MSI210065.126Procavia_capensis
ENSELUG00000011747msi2a6395.238ENSPCOG00000019195-10095.238Propithecus_coquereli
ENSELUG00000011747msi2a9386.644ENSPVAG00000017053MSI29986.644Pteropus_vampyrus
ENSELUG00000011747msi2a10094.888ENSPNYG00000018393msi2a10094.888Pundamilia_nyererei
ENSELUG00000011747msi2a10095.860ENSPNAG00000014957msi2a10095.860Pygocentrus_nattereri
ENSELUG00000011747msi2a10095.860ENSPNAG00000000844msi2b10095.860Pygocentrus_nattereri
ENSELUG00000011747msi2a9394.245ENSRNOG00000025338Msi210094.245Rattus_norvegicus
ENSELUG00000011747msi2a6394.656ENSRROG00000034421-10094.656Rhinopithecus_roxellana
ENSELUG00000011747msi2a9393.750ENSSBOG00000026425MSI29694.167Saimiri_boliviensis_boliviensis
ENSELUG00000011747msi2a9389.032ENSSHAG00000008672MSI210089.032Sarcophilus_harrisii
ENSELUG00000011747msi2a9491.468ENSSFOG00015021687-9595.067Scleropages_formosus
ENSELUG00000011747msi2a9585.950ENSSFOG00015012168msi2b9272.267Scleropages_formosus
ENSELUG00000011747msi2a10095.208ENSSMAG00000018484msi2a10095.208Scophthalmus_maximus
ENSELUG00000011747msi2a10085.373ENSSDUG00000021968-9996.026Seriola_dumerili
ENSELUG00000011747msi2a10095.208ENSSDUG00000014507msi2a10095.208Seriola_dumerili
ENSELUG00000011747msi2a10095.208ENSSLDG00000017172msi2a10095.208Seriola_lalandi_dorsalis
ENSELUG00000011747msi2a6287.097ENSSPUG00000000913-9495.570Sphenodon_punctatus
ENSELUG00000011747msi2a9791.633ENSSPAG00000017793msi2a9397.531Stegastes_partitus
ENSELUG00000011747msi2a10089.329ENSSSCG00000038505MSI210089.329Sus_scrofa
ENSELUG00000011747msi2a7884.541ENSTGUG00000008452MSI210084.541Taeniopygia_guttata
ENSELUG00000011747msi2a10088.060ENSTRUG00000021248msi2a10088.060Takifugu_rubripes
ENSELUG00000011747msi2a8078.632ENSTBEG00000001241MSI27378.926Tupaia_belangeri
ENSELUG00000011747msi2a9188.889ENSTTRG00000002189MSI210088.889Tursiops_truncatus
ENSELUG00000011747msi2a9394.521ENSUAMG00000000700MSI29794.521Ursus_americanus
ENSELUG00000011747msi2a8986.415ENSUMAG00000000505MSI29796.373Ursus_maritimus
ENSELUG00000011747msi2a6283.516ENSVPAG00000006837-6283.516Vicugna_pacos
ENSELUG00000011747msi2a9394.502ENSVVUG00000011783MSI210094.521Vulpes_vulpes
ENSELUG00000011747msi2a9792.935ENSXCOG00000006113msi2a9692.533Xiphophorus_couchianus
ENSELUG00000011747msi2a9695.318ENSXMAG00000000608msi2a9995.318Xiphophorus_maculatus

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