EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000011838 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 14494 bases
Position: chrLG03:723030-737523
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000011459	zf-C2H2	PF00096.26	3.4e-40	1	7
ENSELUP00000011459	zf-C2H2	PF00096.26	3.4e-40	2	7
ENSELUP00000011459	zf-C2H2	PF00096.26	3.4e-40	3	7
ENSELUP00000011459	zf-C2H2	PF00096.26	3.4e-40	4	7
ENSELUP00000011459	zf-C2H2	PF00096.26	3.4e-40	5	7
ENSELUP00000011459	zf-C2H2	PF00096.26	3.4e-40	6	7
ENSELUP00000011459	zf-C2H2	PF00096.26	3.4e-40	7	7
ENSELUP00000011468	zf-C2H2	PF00096.26	1e-38	1	6
ENSELUP00000011468	zf-C2H2	PF00096.26	1e-38	2	6
ENSELUP00000011468	zf-C2H2	PF00096.26	1e-38	3	6
ENSELUP00000011468	zf-C2H2	PF00096.26	1e-38	4	6
ENSELUP00000011468	zf-C2H2	PF00096.26	1e-38	5	6
ENSELUP00000011468	zf-C2H2	PF00096.26	1e-38	6	6
ENSELUP00000011459	zf-met	PF12874.7	6.8e-07	1	1
ENSELUP00000011468	zf-met	PF12874.7	1.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000000406	-	2510	-	ENSELUP00000011468	726 (aa)	-	-
ENSELUT00000000420	-	2747	-	ENSELUP00000011459	560 (aa)	-	UPI000661AF6F

Gene Model

Click here to download ENSELUG00000011838's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000011838's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000011838	-	64	46.528	ENSELUG00000000485	-	88	46.528
ENSELUG00000011838	-	65	43.689	ENSELUG00000012931	-	65	46.860
ENSELUG00000011838	-	68	34.167	ENSELUG00000018737	znf526	84	33.884
ENSELUG00000011838	-	80	38.667	ENSELUG00000005912	-	87	38.667
ENSELUG00000011838	-	98	35.185	ENSELUG00000021381	-	94	40.385
ENSELUG00000011838	-	68	44.578	ENSELUG00000021229	-	88	44.578
ENSELUG00000011838	-	75	41.418	ENSELUG00000022942	-	60	41.418
ENSELUG00000011838	-	67	47.333	ENSELUG00000009575	-	99	43.836
ENSELUG00000011838	-	65	41.981	ENSELUG00000012986	-	51	43.478
ENSELUG00000011838	-	68	40.449	ENSELUG00000013311	-	67	40.909
ENSELUG00000011838	-	69	31.734	ENSELUG00000005894	prdm5	64	31.161
ENSELUG00000011838	-	73	47.126	ENSELUG00000021287	-	77	47.126
ENSELUG00000011838	-	73	45.349	ENSELUG00000021355	-	99	42.484
ENSELUG00000011838	-	68	41.007	ENSELUG00000017958	-	73	40.559
ENSELUG00000011838	-	79	40.244	ENSELUG00000019008	-	84	41.949
ENSELUG00000011838	-	99	41.546	ENSELUG00000001991	-	79	41.546
ENSELUG00000011838	-	64	43.353	ENSELUG00000008148	-	83	44.000
ENSELUG00000011838	-	72	40.465	ENSELUG00000017463	-	91	40.465
ENSELUG00000011838	-	72	42.035	ENSELUG00000021254	-	61	45.918
ENSELUG00000011838	-	66	42.408	ENSELUG00000013342	-	66	42.408
ENSELUG00000011838	-	66	39.512	ENSELUG00000008797	-	57	39.512
ENSELUG00000011838	-	65	45.000	ENSELUG00000013844	-	83	34.466
ENSELUG00000011838	-	71	45.000	ENSELUG00000013348	-	91	45.000
ENSELUG00000011838	-	68	37.563	ENSELUG00000001968	-	71	39.412
ENSELUG00000011838	-	66	36.889	ENSELUG00000013806	-	67	34.492
ENSELUG00000011838	-	70	36.190	ENSELUG00000006058	-	86	36.476
ENSELUG00000011838	-	65	34.884	ENSELUG00000013064	-	74	39.674
ENSELUG00000011838	-	64	48.246	ENSELUG00000000281	-	67	39.080
ENSELUG00000011838	-	64	39.416	ENSELUG00000016933	gfi1b	50	39.416
ENSELUG00000011838	-	69	33.158	ENSELUG00000008786	-	69	33.158
ENSELUG00000011838	-	71	43.931	ENSELUG00000016397	-	55	43.931
ENSELUG00000011838	-	84	44.271	ENSELUG00000010454	-	85	41.589
ENSELUG00000011838	-	65	37.436	ENSELUG00000017454	si:ch73-367f21.6	98	37.436
ENSELUG00000011838	-	84	42.478	ENSELUG00000020211	znf236	78	42.478
ENSELUG00000011838	-	67	44.505	ENSELUG00000009654	-	70	44.505
ENSELUG00000011838	-	68	46.154	ENSELUG00000021499	-	94	38.070
ENSELUG00000011838	-	70	31.463	ENSELUG00000010993	znf319b	91	31.540
ENSELUG00000011838	-	67	37.179	ENSELUG00000010566	si:dkey-182i3.9	64	37.179
ENSELUG00000011838	-	72	41.404	ENSELUG00000021525	-	68	41.404
ENSELUG00000011838	-	98	36.499	ENSELUG00000020794	-	99	36.499
ENSELUG00000011838	-	70	41.714	ENSELUG00000013321	-	89	41.714
ENSELUG00000011838	-	65	40.476	ENSELUG00000005665	zfp64	62	35.028
ENSELUG00000011838	-	98	32.345	ENSELUG00000001909	-	97	36.294
ENSELUG00000011838	-	67	37.685	ENSELUG00000007694	-	76	37.398
ENSELUG00000011838	-	67	43.229	ENSELUG00000013357	-	83	43.229
ENSELUG00000011838	-	76	45.026	ENSELUG00000010470	-	82	39.749
ENSELUG00000011838	-	79	36.145	ENSELUG00000018970	-	82	36.527
ENSELUG00000011838	-	83	39.892	ENSELUG00000012597	-	99	41.622
ENSELUG00000011838	-	71	35.526	ENSELUG00000017783	-	71	35.266
ENSELUG00000011838	-	66	44.043	ENSELUG00000021391	-	67	44.043
ENSELUG00000011838	-	66	45.128	ENSELUG00000018405	-	86	45.128
ENSELUG00000011838	-	65	40.000	ENSELUG00000020017	-	58	40.000
ENSELUG00000011838	-	98	43.119	ENSELUG00000002844	-	66	44.976
ENSELUG00000011838	-	84	44.138	ENSELUG00000019880	-	93	47.337
ENSELUG00000011838	-	66	46.602	ENSELUG00000013094	-	98	45.223
ENSELUG00000011838	-	65	45.161	ENSELUG00000019204	-	94	45.161
ENSELUG00000011838	-	65	45.729	ENSELUG00000013143	-	50	45.729
ENSELUG00000011838	-	70	35.800	ENSELUG00000021242	-	79	39.184
ENSELUG00000011838	-	67	49.650	ENSELUG00000021248	-	82	50.000
ENSELUG00000011838	-	65	36.207	ENSELUG00000013796	-	70	36.826
ENSELUG00000011838	-	65	44.937	ENSELUG00000012088	-	58	44.444
ENSELUG00000011838	-	63	49.565	ENSELUG00000024007	-	77	41.379
ENSELUG00000011838	-	60	43.624	ENSELUG00000021551	-	72	37.027
ENSELUG00000011838	-	90	37.166	ENSELUG00000013245	-	98	37.166
ENSELUG00000011838	-	80	50.758	ENSELUG00000022965	-	65	50.758
ENSELUG00000011838	-	65	42.439	ENSELUG00000004677	-	59	46.821
ENSELUG00000011838	-	99	33.238	ENSELUG00000021560	-	89	47.222
ENSELUG00000011838	-	64	41.341	ENSELUG00000008171	-	50	42.857

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000011838	-	78	45.752	ENSACAG00000026916	-	79	45.752	Anolis_carolinensis
ENSELUG00000011838	-	65	42.289	ENSACAG00000026906	-	93	42.289	Anolis_carolinensis
ENSELUG00000011838	-	67	43.979	ENSACAG00000027001	-	98	45.813	Anolis_carolinensis
ENSELUG00000011838	-	66	42.222	ENSAMXG00000014745	-	82	42.222	Astyanax_mexicanus
ENSELUG00000011838	-	64	55.696	ENSAMXG00000038122	-	95	55.696	Astyanax_mexicanus
ENSELUG00000011838	-	66	35.294	ENSGACG00000001523	-	99	35.294	Gasterosteus_aculeatus
ENSELUG00000011838	-	67	34.930	ENSHBUG00000016384	-	84	34.930	Haplochromis_burtoni
ENSELUG00000011838	-	65	43.429	ENSHCOG00000001629	-	63	43.429	Hippocampus_comes
ENSELUG00000011838	-	64	40.157	ENSHCOG00000017456	-	87	46.207	Hippocampus_comes
ENSELUG00000011838	-	65	35.769	ENSLBEG00000013235	-	82	34.333	Labrus_bergylta
ENSELUG00000011838	-	64	42.254	ENSMGAG00000016603	-	89	42.254	Meleagris_gallopavo
ENSELUG00000011838	-	65	41.194	ENSPNAG00000009184	-	84	41.206	Pygocentrus_nattereri
ENSELUG00000011838	-	66	43.367	ENSPNAG00000009176	-	91	40.293	Pygocentrus_nattereri
ENSELUG00000011838	-	79	40.201	ENSSFOG00015020993	-	84	44.767	Scleropages_formosus
ENSELUG00000011838	-	66	34.572	ENSTNIG00000000528	-	96	34.268	Tetraodon_nigroviridis
ENSELUG00000011838	-	65	35.068	ENSTNIG00000002343	-	85	35.068	Tetraodon_nigroviridis
ENSELUG00000011838	-	66	36.735	ENSXMAG00000020042	-	68	37.729	Xiphophorus_maculatus