EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000011938 (Gene tree)
Gene ID: 105016251
Gene Symbol: -
Alias: -
Full Name: cleavage and polyadenylation specificity factor subunit 5
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 4967 bases
Position: chrLG02:14756329-14761295
Accession: 105016251
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000033605	NUDIX_2	PF13869.6	6.2e-81	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000000269	-	3580	-	ENSELUP00000033605	239 (aa)	-	-

Gene Model

Click here to download ENSELUG00000011938's gene model file

Pathways

Pathway ID	Pathway Name	Source
els03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000011938's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000011938	-	96	88.696	ENSELUG00000016262	-	100	88.696

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000011938	-	96	93.043	ENSG00000167005	NUDT21	100	96.644	Homo_sapiens
ENSELUG00000011938	-	96	93.043	ENSAPOG00000022515	nudt21	100	93.043	Acanthochromis_polyacanthus
ENSELUG00000011938	-	96	93.043	ENSAMEG00000016628	NUDT21	100	93.043	Ailuropoda_melanoleuca
ENSELUG00000011938	-	95	92.952	ENSACIG00000002809	nudt21	99	92.952	Amphilophus_citrinellus
ENSELUG00000011938	-	96	93.043	ENSAOCG00000004820	nudt21	100	93.043	Amphiprion_ocellaris
ENSELUG00000011938	-	96	93.043	ENSAPEG00000013434	nudt21	100	93.043	Amphiprion_percula
ENSELUG00000011938	-	96	93.913	ENSATEG00000002304	nudt21	100	93.913	Anabas_testudineus
ENSELUG00000011938	-	78	95.161	ENSAPLG00000012153	NUDT21	97	95.161	Anas_platyrhynchos
ENSELUG00000011938	-	96	92.609	ENSACAG00000007323	NUDT21	100	92.609	Anolis_carolinensis
ENSELUG00000011938	-	96	93.043	ENSANAG00000034588	-	100	93.043	Aotus_nancymaae
ENSELUG00000011938	-	96	86.957	ENSANAG00000020715	-	93	94.500	Aotus_nancymaae
ENSELUG00000011938	-	92	75.113	ENSANAG00000031404	-	99	75.113	Aotus_nancymaae
ENSELUG00000011938	-	95	92.105	ENSACLG00000004389	nudt21	99	92.105	Astatotilapia_calliptera
ENSELUG00000011938	-	96	94.348	ENSAMXG00000043933	nudt21	100	94.348	Astyanax_mexicanus
ENSELUG00000011938	-	96	93.043	ENSBTAG00000010207	NUDT21	100	93.043	Bos_taurus
ENSELUG00000011938	-	81	72.021	WBGene00009668	cfim-1	85	72.021	Caenorhabditis_elegans
ENSELUG00000011938	-	96	93.043	ENSCJAG00000041932	NUDT21	100	93.043	Callithrix_jacchus
ENSELUG00000011938	-	96	87.712	ENSCAFG00000002667	-	100	87.712	Canis_familiaris
ENSELUG00000011938	-	96	93.478	ENSCAFG00000023283	-	100	93.478	Canis_familiaris
ENSELUG00000011938	-	81	50.515	ENSCAFG00000030119	-	91	50.515	Canis_familiaris
ENSELUG00000011938	-	87	71.635	ENSCAFG00000006152	-	100	71.635	Canis_familiaris
ENSELUG00000011938	-	89	92.019	ENSCAFG00020010371	-	100	86.134	Canis_lupus_dingo
ENSELUG00000011938	-	96	91.304	ENSCAFG00020004953	-	92	91.304	Canis_lupus_dingo
ENSELUG00000011938	-	96	93.043	ENSCHIG00000026616	NUDT21	100	93.043	Capra_hircus
ENSELUG00000011938	-	96	93.478	ENSTSYG00000014602	NUDT21	100	93.478	Carlito_syrichta
ENSELUG00000011938	-	96	91.739	ENSCPOG00000003705	NUDT21	96	97.340	Cavia_porcellus
ENSELUG00000011938	-	96	93.043	ENSCCAG00000035510	NUDT21	100	93.043	Cebus_capucinus
ENSELUG00000011938	-	96	71.739	ENSCCAG00000027748	-	100	71.739	Cebus_capucinus
ENSELUG00000011938	-	96	93.043	ENSCATG00000042445	NUDT21	100	93.043	Cercocebus_atys
ENSELUG00000011938	-	96	93.478	ENSCLAG00000005751	NUDT21	100	93.478	Chinchilla_lanigera
ENSELUG00000011938	-	96	93.043	ENSCSAG00000005136	NUDT21	100	93.043	Chlorocebus_sabaeus
ENSELUG00000011938	-	59	99.000	ENSCHOG00000012165	-	61	99.000	Choloepus_hoffmanni
ENSELUG00000011938	-	96	93.478	ENSCPBG00000011976	NUDT21	100	93.478	Chrysemys_picta_bellii
ENSELUG00000011938	-	92	78.112	ENSCING00000018240	-	97	78.112	Ciona_intestinalis
ENSELUG00000011938	-	92	78.788	ENSCSAVG00000004322	-	97	78.788	Ciona_savignyi
ENSELUG00000011938	-	96	93.043	ENSCANG00000036650	NUDT21	100	93.043	Colobus_angolensis_palliatus
ENSELUG00000011938	-	96	93.478	ENSCGRG00001016313	Nudt21	100	93.478	Cricetulus_griseus_chok1gshd
ENSELUG00000011938	-	90	71.028	ENSCGRG00001007481	-	96	71.028	Cricetulus_griseus_chok1gshd
ENSELUG00000011938	-	96	93.478	ENSCGRG00000016451	Nudt21	100	93.478	Cricetulus_griseus_crigri
ENSELUG00000011938	-	90	71.028	ENSCGRG00000009012	-	96	71.028	Cricetulus_griseus_crigri
ENSELUG00000011938	-	94	94.196	ENSCSEG00000001524	nudt21	98	94.196	Cynoglossus_semilaevis
ENSELUG00000011938	-	94	94.222	ENSCVAG00000009683	nudt21	98	94.222	Cyprinodon_variegatus
ENSELUG00000011938	-	96	93.478	ENSDARG00000003153	nudt21	100	93.478	Danio_rerio
ENSELUG00000011938	-	96	85.652	ENSDNOG00000034510	-	100	85.652	Dasypus_novemcinctus
ENSELUG00000011938	-	87	68.269	ENSDORG00000030074	-	94	68.269	Dipodomys_ordii
ENSELUG00000011938	-	96	93.478	ENSDORG00000005129	-	100	93.478	Dipodomys_ordii
ENSELUG00000011938	-	96	74.895	FBgn0035987	CG3689	99	74.895	Drosophila_melanogaster
ENSELUG00000011938	-	93	93.274	ENSETEG00000013634	NUDT21	100	93.274	Echinops_telfairi
ENSELUG00000011938	-	93	81.982	ENSEBUG00000002498	nudt21	99	88.421	Eptatretus_burgeri
ENSELUG00000011938	-	96	93.478	ENSEASG00005004882	NUDT21	100	93.478	Equus_asinus_asinus
ENSELUG00000011938	-	96	93.478	ENSECAG00000001043	NUDT21	100	93.478	Equus_caballus
ENSELUG00000011938	-	96	93.478	ENSEEUG00000003402	NUDT21	100	93.478	Erinaceus_europaeus
ENSELUG00000011938	-	96	93.478	ENSFCAG00000008669	NUDT21	100	93.478	Felis_catus
ENSELUG00000011938	-	96	93.478	ENSFALG00000007561	NUDT21	100	93.478	Ficedula_albicollis
ENSELUG00000011938	-	96	93.478	ENSFDAG00000011750	NUDT21	100	93.478	Fukomys_damarensis
ENSELUG00000011938	-	76	98.901	ENSFHEG00000011485	nudt21	88	98.901	Fundulus_heteroclitus
ENSELUG00000011938	-	94	92.857	ENSGMOG00000002872	nudt21	100	92.857	Gadus_morhua
ENSELUG00000011938	-	97	93.074	ENSGALG00000003084	NUDT21	50	93.074	Gallus_gallus
ENSELUG00000011938	-	94	94.667	ENSGAFG00000017473	nudt21	98	94.667	Gambusia_affinis
ENSELUG00000011938	-	93	91.480	ENSGACG00000015869	nudt21	95	91.480	Gasterosteus_aculeatus
ENSELUG00000011938	-	96	93.478	ENSGAGG00000017367	NUDT21	100	93.478	Gopherus_agassizii
ENSELUG00000011938	-	96	93.043	ENSGGOG00000002375	NUDT21	100	93.043	Gorilla_gorilla
ENSELUG00000011938	-	92	92.308	ENSHBUG00000015015	nudt21	99	92.308	Haplochromis_burtoni
ENSELUG00000011938	-	96	93.478	ENSHGLG00000015947	NUDT21	100	93.478	Heterocephalus_glaber_female
ENSELUG00000011938	-	96	93.478	ENSHGLG00100011788	NUDT21	100	93.478	Heterocephalus_glaber_male
ENSELUG00000011938	-	94	88.839	ENSHGLG00100009154	-	98	88.839	Heterocephalus_glaber_male
ENSELUG00000011938	-	96	84.348	ENSHGLG00100000342	-	100	84.348	Heterocephalus_glaber_male
ENSELUG00000011938	-	94	94.196	ENSHCOG00000004360	nudt21	98	94.196	Hippocampus_comes
ENSELUG00000011938	-	96	94.348	ENSIPUG00000004208	nudt21	100	94.348	Ictalurus_punctatus
ENSELUG00000011938	-	96	93.043	ENSSTOG00000005838	NUDT21	100	93.043	Ictidomys_tridecemlineatus
ENSELUG00000011938	-	96	93.478	ENSJJAG00000017101	Nudt21	100	93.478	Jaculus_jaculus
ENSELUG00000011938	-	96	91.810	ENSKMAG00000008705	nudt21	100	91.810	Kryptolebias_marmoratus
ENSELUG00000011938	-	94	95.111	ENSLBEG00000024494	nudt21	98	95.111	Labrus_bergylta
ENSELUG00000011938	-	96	92.609	ENSLACG00000015324	NUDT21	100	92.609	Latimeria_chalumnae
ENSELUG00000011938	-	96	92.174	ENSLOCG00000008005	nudt21	100	92.174	Lepisosteus_oculatus
ENSELUG00000011938	-	96	93.478	ENSLAFG00000028465	-	100	93.478	Loxodonta_africana
ENSELUG00000011938	-	83	72.362	ENSLAFG00000029402	-	100	72.362	Loxodonta_africana
ENSELUG00000011938	-	96	93.043	ENSMFAG00000038276	NUDT21	100	93.043	Macaca_fascicularis
ENSELUG00000011938	-	96	93.043	ENSMMUG00000038955	NUDT21	100	93.043	Macaca_mulatta
ENSELUG00000011938	-	96	93.043	ENSMNEG00000038680	NUDT21	100	93.043	Macaca_nemestrina
ENSELUG00000011938	-	96	93.043	ENSMLEG00000041489	NUDT21	100	93.043	Mandrillus_leucophaeus
ENSELUG00000011938	-	96	93.478	ENSMAMG00000020931	nudt21	100	93.478	Mastacembelus_armatus
ENSELUG00000011938	-	95	92.105	ENSMZEG00005013153	nudt21	99	92.105	Maylandia_zebra
ENSELUG00000011938	-	79	97.340	ENSMGAG00000000975	NUDT21	100	97.340	Meleagris_gallopavo
ENSELUG00000011938	-	96	93.478	ENSMAUG00000000829	Nudt21	100	93.478	Mesocricetus_auratus
ENSELUG00000011938	-	96	93.478	ENSMICG00000046719	NUDT21	100	93.478	Microcebus_murinus
ENSELUG00000011938	-	96	93.478	ENSMOCG00000018234	Nudt21	100	93.478	Microtus_ochrogaster
ENSELUG00000011938	-	96	87.391	ENSMMOG00000016237	nudt21	100	87.391	Mola_mola
ENSELUG00000011938	-	96	93.478	ENSMODG00000013371	NUDT21	100	93.478	Monodelphis_domestica
ENSELUG00000011938	-	95	87.225	ENSMALG00000000627	nudt21	98	87.225	Monopterus_albus
ENSELUG00000011938	-	96	93.478	MGP_CAROLIEiJ_G0031388	Nudt21	100	93.478	Mus_caroli
ENSELUG00000011938	-	96	93.478	ENSMUSG00000031754	Nudt21	100	93.478	Mus_musculus
ENSELUG00000011938	-	96	93.478	MGP_PahariEiJ_G0022987	Nudt21	100	93.478	Mus_pahari
ENSELUG00000011938	-	96	93.478	MGP_SPRETEiJ_G0032507	Nudt21	100	93.478	Mus_spretus
ENSELUG00000011938	-	96	93.478	ENSMPUG00000003451	-	100	93.478	Mustela_putorius_furo
ENSELUG00000011938	-	96	92.609	ENSMPUG00000019793	-	100	92.609	Mustela_putorius_furo
ENSELUG00000011938	-	96	93.478	ENSMLUG00000004968	NUDT21	100	93.478	Myotis_lucifugus
ENSELUG00000011938	-	96	93.478	ENSNGAG00000023358	Nudt21	100	93.478	Nannospalax_galili
ENSELUG00000011938	-	92	92.308	ENSNBRG00000009313	nudt21	99	92.308	Neolamprologus_brichardi
ENSELUG00000011938	-	96	93.043	ENSNLEG00000001963	NUDT21	100	93.043	Nomascus_leucogenys
ENSELUG00000011938	-	90	84.579	ENSNLEG00000009890	-	100	84.579	Nomascus_leucogenys
ENSELUG00000011938	-	96	93.043	ENSMEUG00000015461	NUDT21	100	93.043	Notamacropus_eugenii
ENSELUG00000011938	-	96	91.304	ENSOPRG00000006689	NUDT21	100	91.304	Ochotona_princeps
ENSELUG00000011938	-	96	93.478	ENSODEG00000017012	-	100	93.478	Octodon_degus
ENSELUG00000011938	-	96	82.609	ENSODEG00000002256	-	100	82.609	Octodon_degus
ENSELUG00000011938	-	95	92.105	ENSONIG00000005734	nudt21	99	92.105	Oreochromis_niloticus
ENSELUG00000011938	-	89	93.897	ENSOANG00000012782	NUDT21	99	90.265	Ornithorhynchus_anatinus
ENSELUG00000011938	-	96	93.478	ENSOCUG00000017224	-	100	93.478	Oryctolagus_cuniculus
ENSELUG00000011938	-	96	92.174	ENSOCUG00000027084	-	100	92.174	Oryctolagus_cuniculus
ENSELUG00000011938	-	96	89.565	ENSOCUG00000021881	-	100	89.565	Oryctolagus_cuniculus
ENSELUG00000011938	-	94	93.778	ENSORLG00000008789	nudt21	98	93.778	Oryzias_latipes
ENSELUG00000011938	-	94	93.778	ENSORLG00020007635	nudt21	98	93.778	Oryzias_latipes_hni
ENSELUG00000011938	-	94	93.778	ENSORLG00015005300	nudt21	98	93.778	Oryzias_latipes_hsok
ENSELUG00000011938	-	94	93.778	ENSOMEG00000002368	nudt21	98	93.778	Oryzias_melastigma
ENSELUG00000011938	-	96	93.478	ENSOGAG00000014888	NUDT21	100	93.478	Otolemur_garnettii
ENSELUG00000011938	-	81	87.565	ENSOGAG00000033902	-	90	87.565	Otolemur_garnettii
ENSELUG00000011938	-	96	93.043	ENSOARG00000018460	NUDT21	100	93.043	Ovis_aries
ENSELUG00000011938	-	96	92.609	ENSPPAG00000043853	NUDT21	100	92.609	Pan_paniscus
ENSELUG00000011938	-	96	93.478	ENSPPRG00000023740	NUDT21	100	93.478	Panthera_pardus
ENSELUG00000011938	-	96	93.478	ENSPTIG00000021352	NUDT21	100	93.478	Panthera_tigris_altaica
ENSELUG00000011938	-	96	93.043	ENSPTRG00000008131	NUDT21	100	93.043	Pan_troglodytes
ENSELUG00000011938	-	96	93.043	ENSPANG00000019149	NUDT21	100	93.043	Papio_anubis
ENSELUG00000011938	-	94	95.982	ENSPKIG00000022541	-	98	95.982	Paramormyrops_kingsleyae
ENSELUG00000011938	-	96	93.913	ENSPKIG00000001620	nudt21	100	93.913	Paramormyrops_kingsleyae
ENSELUG00000011938	-	67	96.894	ENSPSIG00000008178	NUDT21	100	96.894	Pelodiscus_sinensis
ENSELUG00000011938	-	96	78.448	ENSPMGG00000002636	nudt21	92	78.448	Periophthalmus_magnuspinnatus
ENSELUG00000011938	-	96	93.478	ENSPEMG00000015463	Nudt21	100	93.478	Peromyscus_maniculatus_bairdii
ENSELUG00000011938	-	94	85.778	ENSPMAG00000000684	nudt21	99	85.778	Petromyzon_marinus
ENSELUG00000011938	-	96	93.478	ENSPCIG00000027199	NUDT21	100	93.478	Phascolarctos_cinereus
ENSELUG00000011938	-	94	94.222	ENSPFOG00000001419	nudt21	98	94.222	Poecilia_formosa
ENSELUG00000011938	-	94	94.222	ENSPLAG00000016420	nudt21	98	94.222	Poecilia_latipinna
ENSELUG00000011938	-	94	94.222	ENSPMEG00000022481	nudt21	98	94.222	Poecilia_mexicana
ENSELUG00000011938	-	94	94.222	ENSPREG00000001285	nudt21	98	94.222	Poecilia_reticulata
ENSELUG00000011938	-	96	93.043	ENSPPYG00000007365	NUDT21	100	93.043	Pongo_abelii
ENSELUG00000011938	-	96	82.174	ENSPCAG00000003875	NUDT21	100	82.174	Procavia_capensis
ENSELUG00000011938	-	92	77.828	ENSPCOG00000020893	-	94	84.211	Propithecus_coquereli
ENSELUG00000011938	-	89	81.690	ENSPCOG00000027587	-	99	81.690	Propithecus_coquereli
ENSELUG00000011938	-	96	93.478	ENSPCOG00000016104	-	100	93.478	Propithecus_coquereli
ENSELUG00000011938	-	79	97.340	ENSPVAG00000014583	NUDT21	100	97.340	Pteropus_vampyrus
ENSELUG00000011938	-	79	98.404	ENSPNYG00000014773	nudt21	94	98.404	Pundamilia_nyererei
ENSELUG00000011938	-	96	94.348	ENSPNAG00000017032	nudt21	100	94.348	Pygocentrus_nattereri
ENSELUG00000011938	-	96	93.478	ENSRNOG00000042983	Nudt21	100	93.478	Rattus_norvegicus
ENSELUG00000011938	-	96	91.739	ENSRBIG00000030142	-	100	91.739	Rhinopithecus_bieti
ENSELUG00000011938	-	96	93.043	ENSRBIG00000033736	-	100	93.043	Rhinopithecus_bieti
ENSELUG00000011938	-	96	93.043	ENSRROG00000034864	NUDT21	100	93.043	Rhinopithecus_roxellana
ENSELUG00000011938	-	96	93.043	ENSSBOG00000033712	NUDT21	100	93.043	Saimiri_boliviensis_boliviensis
ENSELUG00000011938	-	96	93.478	ENSSHAG00000009651	NUDT21	100	93.478	Sarcophilus_harrisii
ENSELUG00000011938	-	96	93.913	ENSSFOG00015011349	nudt21	80	93.913	Scleropages_formosus
ENSELUG00000011938	-	94	93.805	ENSSFOG00015013984	nudt21	98	93.805	Scleropages_formosus
ENSELUG00000011938	-	96	94.348	ENSSMAG00000000646	nudt21	100	94.348	Scophthalmus_maximus
ENSELUG00000011938	-	96	93.478	ENSSDUG00000019001	nudt21	100	93.478	Seriola_dumerili
ENSELUG00000011938	-	96	93.478	ENSSLDG00000018315	nudt21	100	93.478	Seriola_lalandi_dorsalis
ENSELUG00000011938	-	96	93.043	ENSSARG00000006493	NUDT21	100	93.043	Sorex_araneus
ENSELUG00000011938	-	96	93.478	ENSSPUG00000004128	NUDT21	100	93.478	Sphenodon_punctatus
ENSELUG00000011938	-	96	93.043	ENSSPAG00000010060	nudt21	100	93.043	Stegastes_partitus
ENSELUG00000011938	-	96	59.565	ENSSSCG00000032485	-	100	59.565	Sus_scrofa
ENSELUG00000011938	-	96	80.000	ENSSSCG00000004786	-	100	80.000	Sus_scrofa
ENSELUG00000011938	-	95	65.487	ENSSSCG00000007921	-	91	73.404	Sus_scrofa
ENSELUG00000011938	-	96	93.043	ENSSSCG00000034521	NUDT21	100	93.043	Sus_scrofa
ENSELUG00000011938	-	96	93.478	ENSTGUG00000006599	NUDT21	100	93.478	Taeniopygia_guttata
ENSELUG00000011938	-	96	92.174	ENSTRUG00000017953	nudt21	100	92.174	Takifugu_rubripes
ENSELUG00000011938	-	96	92.609	ENSTNIG00000009312	nudt21	100	92.609	Tetraodon_nigroviridis
ENSELUG00000011938	-	54	89.231	ENSTBEG00000007664	NUDT21	56	89.231	Tupaia_belangeri
ENSELUG00000011938	-	96	93.478	ENSTTRG00000013545	NUDT21	100	93.478	Tursiops_truncatus
ENSELUG00000011938	-	94	92.889	ENSUAMG00000016945	NUDT21	97	92.889	Ursus_americanus
ENSELUG00000011938	-	96	93.478	ENSUMAG00000001344	NUDT21	100	93.478	Ursus_maritimus
ENSELUG00000011938	-	96	93.043	ENSVPAG00000003701	NUDT21	100	93.043	Vicugna_pacos
ENSELUG00000011938	-	96	80.000	ENSVVUG00000013998	-	100	80.000	Vulpes_vulpes
ENSELUG00000011938	-	72	86.550	ENSVVUG00000021791	-	90	86.550	Vulpes_vulpes
ENSELUG00000011938	-	96	93.913	ENSXETG00000020017	nudt21	100	93.913	Xenopus_tropicalis
ENSELUG00000011938	-	94	94.667	ENSXMAG00000014172	nudt21	98	94.667	Xiphophorus_maculatus