EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000011966 (Gene tree)
Gene ID: 105016081
Gene Symbol: hnrnpua
Alias: fc51c09|wu:fc51c09
Full Name: heterogeneous nuclear ribonucleoprotein U
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 13855 bases
Position: chrLG15:31846464-31860318
Accession: 105016081
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000033652	SAP	PF02037.27	2.1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000000210	-	1116	-	ENSELUP00000011587	371 (aa)	-	-
ENSELUT00000000193	-	2100	XM_013137674	ENSELUP00000033652	699 (aa)	XP_012993128	-

Gene Model

Click here to download ENSELUG00000011966's gene model file

Pathways

Pathway ID	Pathway Name	Source
els03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000011966's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000011966	hnrnpua	57	55.250	ENSELUG00000021668	-	63	65.217
ENSELUG00000011966	hnrnpua	81	32.574	ENSELUG00000008134	si:ch211-107m4.1	85	32.522
ENSELUG00000011966	hnrnpua	90	52.857	ENSELUG00000019520	HNRNPUL1	78	44.935
ENSELUG00000011966	hnrnpua	98	69.772	ENSELUG00000010733	hnrnpub	100	56.491

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000011966	hnrnpua	67	72.973	ENSG00000153187	HNRNPU	94	81.250	Homo_sapiens
ENSELUG00000011966	hnrnpua	89	65.079	ENSAMEG00000009145	HNRNPU	89	57.921	Ailuropoda_melanoleuca
ENSELUG00000011966	hnrnpua	100	57.255	ENSACIG00000012138	hnrnpub	100	58.179	Amphilophus_citrinellus
ENSELUG00000011966	hnrnpua	95	68.972	ENSATEG00000016178	hnrnpub	97	59.348	Anabas_testudineus
ENSELUG00000011966	hnrnpua	66	72.683	ENSACAG00000004511	HNRNPU	79	61.404	Anolis_carolinensis
ENSELUG00000011966	hnrnpua	57	73.737	ENSANAG00000033895	-	99	50.809	Aotus_nancymaae
ENSELUG00000011966	hnrnpua	67	72.727	ENSBTAG00000007606	HNRNPU	89	55.844	Bos_taurus
ENSELUG00000011966	hnrnpua	88	65.079	ENSCJAG00000016914	HNRNPU	99	47.321	Callithrix_jacchus
ENSELUG00000011966	hnrnpua	58	72.973	ENSCAFG00020000918	HNRNPU	99	50.246	Canis_lupus_dingo
ENSELUG00000011966	hnrnpua	77	57.725	ENSCHIG00000004900	HNRNPU	99	50.613	Capra_hircus
ENSELUG00000011966	hnrnpua	67	72.973	ENSCPOG00000011887	HNRNPU	89	56.169	Cavia_porcellus
ENSELUG00000011966	hnrnpua	67	72.482	ENSCCAG00000037859	-	99	50.685	Cebus_capucinus
ENSELUG00000011966	hnrnpua	67	72.727	ENSCATG00000035273	HNRNPU	99	51.235	Cercocebus_atys
ENSELUG00000011966	hnrnpua	67	72.973	ENSCLAG00000007100	HNRNPU	89	56.169	Chinchilla_lanigera
ENSELUG00000011966	hnrnpua	58	72.727	ENSCSAG00000009219	HNRNPU	99	50.184	Chlorocebus_sabaeus
ENSELUG00000011966	hnrnpua	64	76.000	ENSCHOG00000001387	HNRNPU	53	76.000	Choloepus_hoffmanni
ENSELUG00000011966	hnrnpua	78	72.771	ENSCPBG00000009415	HNRNPU	88	57.800	Chrysemys_picta_bellii
ENSELUG00000011966	hnrnpua	90	65.079	ENSCANG00000022780	HNRNPU	99	51.549	Colobus_angolensis_palliatus
ENSELUG00000011966	hnrnpua	64	81.395	ENSCGRG00001020525	Hnrnpu	99	51.111	Cricetulus_griseus_chok1gshd
ENSELUG00000011966	hnrnpua	93	55.618	ENSCSEG00000010804	hnrnpub	99	59.388	Cynoglossus_semilaevis
ENSELUG00000011966	hnrnpua	100	51.591	ENSCVAG00000004280	hnrnpub	100	53.984	Cyprinodon_variegatus
ENSELUG00000011966	hnrnpua	97	66.132	ENSDARG00000004735	hnrnpub	70	65.845	Danio_rerio
ENSELUG00000011966	hnrnpua	100	62.291	ENSDARG00000015206	hnrnpua	100	62.677	Danio_rerio
ENSELUG00000011966	hnrnpua	99	54.021	ENSDNOG00000000215	HNRNPU	99	52.722	Dasypus_novemcinctus
ENSELUG00000011966	hnrnpua	81	58.525	ENSDORG00000015491	Hnrnpu	99	52.070	Dipodomys_ordii
ENSELUG00000011966	hnrnpua	88	65.079	ENSETEG00000014565	HNRNPU	99	50.246	Echinops_telfairi
ENSELUG00000011966	hnrnpua	67	72.973	ENSEASG00005003017	HNRNPU	99	49.756	Equus_asinus_asinus
ENSELUG00000011966	hnrnpua	67	72.973	ENSECAG00000007955	HNRNPU	99	49.756	Equus_caballus
ENSELUG00000011966	hnrnpua	58	72.727	ENSFCAG00000002156	HNRNPU	99	50.491	Felis_catus
ENSELUG00000011966	hnrnpua	95	62.857	ENSFDAG00000006026	HNRNPU	99	64.286	Fukomys_damarensis
ENSELUG00000011966	hnrnpua	97	64.947	ENSFHEG00000022639	hnrnpub	87	67.864	Fundulus_heteroclitus
ENSELUG00000011966	hnrnpua	100	56.767	ENSGMOG00000001755	hnrnpub	99	57.196	Gadus_morhua
ENSELUG00000011966	hnrnpua	88	65.574	ENSGALG00000010671	HNRNPU	87	59.143	Gallus_gallus
ENSELUG00000011966	hnrnpua	79	61.274	ENSGGOG00000004061	HNRNPU	99	51.355	Gorilla_gorilla
ENSELUG00000011966	hnrnpua	66	73.267	ENSHGLG00000010594	-	99	50.737	Heterocephalus_glaber_female
ENSELUG00000011966	hnrnpua	88	78.000	ENSHGLG00100015093	HNRNPU	99	78.000	Heterocephalus_glaber_male
ENSELUG00000011966	hnrnpua	80	69.535	ENSHCOG00000020091	hnrnpub	88	62.950	Hippocampus_comes
ENSELUG00000011966	hnrnpua	78	91.489	ENSIPUG00000007749	hnrnpu	94	91.489	Ictalurus_punctatus
ENSELUG00000011966	hnrnpua	64	81.395	ENSJJAG00000011371	Hnrnpu	99	50.483	Jaculus_jaculus
ENSELUG00000011966	hnrnpua	95	66.667	ENSKMAG00000004532	hnrnpub	88	69.258	Kryptolebias_marmoratus
ENSELUG00000011966	hnrnpua	99	50.000	ENSLACG00000017463	HNRNPU	99	51.192	Latimeria_chalumnae
ENSELUG00000011966	hnrnpua	81	81.798	ENSLOCG00000016652	hnrnpua	99	64.951	Lepisosteus_oculatus
ENSELUG00000011966	hnrnpua	88	65.079	ENSLAFG00000021377	HNRNPU	99	50.617	Loxodonta_africana
ENSELUG00000011966	hnrnpua	67	72.727	ENSMFAG00000037308	HNRNPU	99	51.235	Macaca_fascicularis
ENSELUG00000011966	hnrnpua	58	72.727	ENSMMUG00000021098	HNRNPU	99	50.678	Macaca_mulatta
ENSELUG00000011966	hnrnpua	67	72.727	ENSMNEG00000043645	HNRNPU	99	51.235	Macaca_nemestrina
ENSELUG00000011966	hnrnpua	98	68.515	ENSMAMG00000007196	hnrnpub	100	59.777	Mastacembelus_armatus
ENSELUG00000011966	hnrnpua	66	81.395	ENSMAUG00000008842	Hnrnpu	99	51.048	Mesocricetus_auratus
ENSELUG00000011966	hnrnpua	89	65.079	ENSMICG00000004616	HNRNPU	99	51.418	Microcebus_murinus
ENSELUG00000011966	hnrnpua	66	81.395	ENSMOCG00000015623	Hnrnpu	99	51.241	Microtus_ochrogaster
ENSELUG00000011966	hnrnpua	81	76.596	ENSMODG00000006515	HNRNPU	77	76.596	Monodelphis_domestica
ENSELUG00000011966	hnrnpua	79	58.902	MGP_CAROLIEiJ_G0014962	Hnrnpu	99	50.925	Mus_caroli
ENSELUG00000011966	hnrnpua	79	58.902	ENSMUSG00000039630	Hnrnpu	99	50.803	Mus_musculus
ENSELUG00000011966	hnrnpua	58	71.990	MGP_PahariEiJ_G0028193	Hnrnpu	99	50.305	Mus_pahari
ENSELUG00000011966	hnrnpua	79	58.902	MGP_SPRETEiJ_G0015761	Hnrnpu	99	50.803	Mus_spretus
ENSELUG00000011966	hnrnpua	82	71.635	ENSMLUG00000000475	HNRNPU	99	51.418	Myotis_lucifugus
ENSELUG00000011966	hnrnpua	57	73.737	ENSNGAG00000019075	Hnrnpu	99	51.117	Nannospalax_galili
ENSELUG00000011966	hnrnpua	65	76.596	ENSMEUG00000000541	HNRNPU	55	76.596	Notamacropus_eugenii
ENSELUG00000011966	hnrnpua	64	70.950	ENSODEG00000014458	-	99	65.625	Octodon_degus
ENSELUG00000011966	hnrnpua	86	65.079	ENSOCUG00000014469	HNRNPU	62	71.845	Oryctolagus_cuniculus
ENSELUG00000011966	hnrnpua	100	56.858	ENSORLG00000016114	hnrnpub	100	57.426	Oryzias_latipes
ENSELUG00000011966	hnrnpua	100	56.359	ENSORLG00020005363	hnrnpub	100	57.178	Oryzias_latipes_hni
ENSELUG00000011966	hnrnpua	100	56.010	ENSORLG00015001190	hnrnpub	100	57.178	Oryzias_latipes_hsok
ENSELUG00000011966	hnrnpua	80	73.488	ENSOMEG00000014951	hnrnpub	69	68.515	Oryzias_melastigma
ENSELUG00000011966	hnrnpua	79	58.970	ENSOGAG00000014024	HNRNPU	99	50.185	Otolemur_garnettii
ENSELUG00000011966	hnrnpua	67	72.372	ENSOARG00000004985	HNRNPU	99	51.499	Ovis_aries
ENSELUG00000011966	hnrnpua	67	72.973	ENSPPAG00000038652	HNRNPU	99	51.355	Pan_paniscus
ENSELUG00000011966	hnrnpua	68	71.845	ENSPPRG00000002662	HNRNPU	99	46.008	Panthera_pardus
ENSELUG00000011966	hnrnpua	67	72.973	ENSPTRG00000002182	HNRNPU	99	51.355	Pan_troglodytes
ENSELUG00000011966	hnrnpua	79	59.316	ENSPANG00000011643	HNRNPU	99	51.235	Papio_anubis
ENSELUG00000011966	hnrnpua	100	64.906	ENSPKIG00000022332	hnrnpub	100	66.583	Paramormyrops_kingsleyae
ENSELUG00000011966	hnrnpua	100	65.370	ENSPKIG00000006885	hnrnpua	100	67.084	Paramormyrops_kingsleyae
ENSELUG00000011966	hnrnpua	65	76.596	ENSPCIG00000008657	HNRNPU	77	76.596	Phascolarctos_cinereus
ENSELUG00000011966	hnrnpua	97	64.841	ENSPLAG00000004160	hnrnpub	100	57.073	Poecilia_latipinna
ENSELUG00000011966	hnrnpua	57	72.980	ENSPCOG00000003883	-	99	51.317	Propithecus_coquereli
ENSELUG00000011966	hnrnpua	67	72.727	ENSPCOG00000018655	-	99	50.677	Propithecus_coquereli
ENSELUG00000011966	hnrnpua	67	72.727	ENSPVAG00000002581	HNRNPU	89	56.721	Pteropus_vampyrus
ENSELUG00000011966	hnrnpua	100	59.630	ENSPNAG00000001055	hnrnpub	100	63.041	Pygocentrus_nattereri
ENSELUG00000011966	hnrnpua	58	72.482	ENSRNOG00000033790	Hnrnpu	99	50.988	Rattus_norvegicus
ENSELUG00000011966	hnrnpua	79	59.197	ENSRBIG00000031519	HNRNPU	99	51.358	Rhinopithecus_bieti
ENSELUG00000011966	hnrnpua	67	72.549	ENSRROG00000041642	HNRNPU	99	50.369	Rhinopithecus_roxellana
ENSELUG00000011966	hnrnpua	98	76.844	ENSSFOG00015001124	hnrnpub	100	67.702	Scleropages_formosus
ENSELUG00000011966	hnrnpua	91	73.038	ENSSFOG00015019004	hnrnpu	100	67.038	Scleropages_formosus
ENSELUG00000011966	hnrnpua	80	73.953	ENSSMAG00000003607	hnrnpub	100	55.976	Scophthalmus_maximus
ENSELUG00000011966	hnrnpua	64	80.488	ENSSPUG00000011393	HNRNPU	89	59.934	Sphenodon_punctatus
ENSELUG00000011966	hnrnpua	67	72.482	ENSSSCG00000010877	HNRNPU	99	49.816	Sus_scrofa
ENSELUG00000011966	hnrnpua	95	65.679	ENSTRUG00000007759	hnrnpub	100	58.866	Takifugu_rubripes
ENSELUG00000011966	hnrnpua	98	64.632	ENSTNIG00000009725	hnrnpub	100	55.082	Tetraodon_nigroviridis
ENSELUG00000011966	hnrnpua	58	78.723	ENSTTRG00000005281	HNRNPU	60	77.778	Tursiops_truncatus
ENSELUG00000011966	hnrnpua	79	61.754	ENSUAMG00000021120	HNRNPU	99	53.627	Ursus_americanus
ENSELUG00000011966	hnrnpua	90	59.437	ENSUMAG00000012322	HNRNPU	100	53.765	Ursus_maritimus
ENSELUG00000011966	hnrnpua	58	66.667	ENSVPAG00000010520	HNRNPU	84	65.079	Vicugna_pacos
ENSELUG00000011966	hnrnpua	79	59.483	ENSVVUG00000026524	HNRNPU	99	52.835	Vulpes_vulpes
ENSELUG00000011966	hnrnpua	63	80.000	ENSXETG00000011386	hnrnpu	99	49.071	Xenopus_tropicalis
ENSELUG00000011966	hnrnpua	92	66.197	ENSXMAG00000010356	hnrnpub	100	54.100	Xiphophorus_maculatus