EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000012035 (Gene tree)
Gene ID: 105031461
Gene Symbol: rab11al
Alias: fc54g10|wu:fc54g10|zgc:63565
Full Name: ras-related protein Rab-11A
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 11595 bases
Position: chrLG20:11985254-11996848
Accession: 105031461
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000033740	MMR_HSR1	PF01926.23	4.6e-07	1	1
ENSELUP00000011717	MMR_HSR1	PF01926.23	5.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000019818	-	651	XM_010905900	ENSELUP00000033740	216 (aa)	XP_010904202	UPI0005779A40
ENSELUT00000019825	-	699	-	ENSELUP00000011717	232 (aa)	-	-

Gene Model

Click here to download ENSELUG00000012035's gene model file

Pathways

Pathway ID	Pathway Name	Source
els04144	Endocytosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000012035's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000012035	rab11al	77	35.542	ENSELUG00000022470	rab6bb	80	35.542
ENSELUG00000012035	rab11al	73	41.104	ENSELUG00000000175	zgc:100918	79	41.104
ENSELUG00000012035	rab11al	94	41.748	ENSELUG00000013957	-	96	41.748
ENSELUG00000012035	rab11al	74	31.288	ENSELUG00000013666	si:cabz01085950.1	81	31.288
ENSELUG00000012035	rab11al	73	49.045	ENSELUG00000010439	-	71	49.045
ENSELUG00000012035	rab11al	81	50.575	ENSELUG00000014785	rab4a	82	50.575
ENSELUG00000012035	rab11al	73	40.491	ENSELUG00000013219	rab33a	68	40.491
ENSELUG00000012035	rab11al	96	45.894	ENSELUG00000012428	-	99	45.894
ENSELUG00000012035	rab11al	73	30.380	ENSELUG00000006480	rheb	85	30.380
ENSELUG00000012035	rab11al	99	86.977	ENSELUG00000002999	rab11a	93	94.815
ENSELUG00000012035	rab11al	96	45.894	ENSELUG00000012166	RAB1A	94	45.894
ENSELUG00000012035	rab11al	77	40.331	ENSELUG00000023120	-	83	40.331
ENSELUG00000012035	rab11al	94	33.333	ENSELUG00000008876	rab6a	94	33.333
ENSELUG00000012035	rab11al	78	42.857	ENSELUG00000013436	rab5ab	84	42.857
ENSELUG00000012035	rab11al	94	41.748	ENSELUG00000005304	rab39ba	96	41.748
ENSELUG00000012035	rab11al	96	40.580	ENSELUG00000023972	rab35	99	42.180
ENSELUG00000012035	rab11al	98	62.559	ENSELUG00000012060	rab25b	98	62.559
ENSELUG00000012035	rab11al	90	89.175	ENSELUG00000019240	-	99	89.175
ENSELUG00000012035	rab11al	77	51.205	ENSELUG00000011680	zgc:171927	99	44.019
ENSELUG00000012035	rab11al	99	82.326	ENSELUG00000020948	-	98	93.750
ENSELUG00000012035	rab11al	77	53.012	ENSELUG00000013571	-	77	53.012
ENSELUG00000012035	rab11al	67	35.862	ENSELUG00000020788	rab23	69	36.420
ENSELUG00000012035	rab11al	81	37.500	ENSELUG00000016682	-	91	37.500
ENSELUG00000012035	rab11al	73	42.038	ENSELUG00000015343	rab22a	81	42.038
ENSELUG00000012035	rab11al	73	30.625	ENSELUG00000005090	si:ch73-116o1.2	73	32.000
ENSELUG00000012035	rab11al	67	42.405	ENSELUG00000011352	-	61	42.405
ENSELUG00000012035	rab11al	73	49.682	ENSELUG00000018516	rab5c	72	49.682
ENSELUG00000012035	rab11al	96	40.865	ENSELUG00000023247	si:dkey-16l2.16	97	40.865
ENSELUG00000012035	rab11al	96	43.478	ENSELUG00000012801	rab13	97	43.478
ENSELUG00000012035	rab11al	81	43.889	ENSELUG00000020012	rab15	75	45.912
ENSELUG00000012035	rab11al	67	41.497	ENSELUG00000002575	rab33ba	71	38.596
ENSELUG00000012035	rab11al	99	82.326	ENSELUG00000000916	-	92	94.531
ENSELUG00000012035	rab11al	74	43.396	ENSELUG00000005989	RAB15	74	43.396
ENSELUG00000012035	rab11al	66	32.680	ENSELUG00000013206	rasl11a	65	32.680
ENSELUG00000012035	rab11al	76	38.596	ENSELUG00000018921	rab36	73	36.082
ENSELUG00000012035	rab11al	96	45.894	ENSELUG00000023815	-	99	45.894
ENSELUG00000012035	rab11al	81	37.500	ENSELUG00000006539	RAB7A	91	37.500
ENSELUG00000012035	rab11al	75	47.853	ENSELUG00000022997	rab30	79	46.875
ENSELUG00000012035	rab11al	94	47.783	ENSELUG00000023964	rab2a	99	46.667
ENSELUG00000012035	rab11al	94	35.407	ENSELUG00000016622	rab9a	97	35.407
ENSELUG00000012035	rab11al	75	46.914	ENSELUG00000016450	rab18b	81	45.783
ENSELUG00000012035	rab11al	86	37.500	ENSELUG00000007123	rab12	83	37.500
ENSELUG00000012035	rab11al	80	52.601	ENSELUG00000009832	rab14	80	52.601
ENSELUG00000012035	rab11al	75	45.062	ENSELUG00000003805	rab18a	79	45.062
ENSELUG00000012035	rab11al	58	30.000	ENSELUG00000023460	-	63	30.000
ENSELUG00000012035	rab11al	75	40.719	ENSELUG00000004378	rab9b	88	40.449
ENSELUG00000012035	rab11al	98	63.679	ENSELUG00000006604	rab25a	97	63.679
ENSELUG00000012035	rab11al	99	82.407	ENSELUG00000021148	rab11bb	99	82.407
ENSELUG00000012035	rab11al	69	34.667	ENSELUG00000003058	KRAS	85	35.802
ENSELUG00000012035	rab11al	53	30.252	ENSELUG00000004400	arl4cb	60	30.252
ENSELUG00000012035	rab11al	88	33.158	ENSELUG00000001257	rab6ba	91	33.158
ENSELUG00000012035	rab11al	73	31.013	ENSELUG00000018367	rheb	85	31.013
ENSELUG00000012035	rab11al	72	34.132	ENSELUG00000004712	HRAS	93	35.196
ENSELUG00000012035	rab11al	79	39.429	ENSELUG00000021199	RAB9A	79	39.429
ENSELUG00000012035	rab11al	73	48.408	ENSELUG00000006462	rab5aa	73	48.408
ENSELUG00000012035	rab11al	96	46.377	ENSELUG00000015413	rab1ab	99	46.377
ENSELUG00000012035	rab11al	84	42.623	ENSELUG00000010345	rab42a	85	42.623
ENSELUG00000012035	rab11al	71	34.524	ENSELUG00000022157	rab34a	64	34.524

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000012035	rab11al	100	92.593	ENSAPOG00000008251	rab11al	100	92.593	Acanthochromis_polyacanthus
ENSELUG00000012035	rab11al	100	93.519	ENSACIG00000017403	rab11al	100	93.519	Amphilophus_citrinellus
ENSELUG00000012035	rab11al	100	93.981	ENSAOCG00000015678	rab11al	100	93.981	Amphiprion_ocellaris
ENSELUG00000012035	rab11al	100	93.981	ENSAPEG00000022135	rab11al	100	93.981	Amphiprion_percula
ENSELUG00000012035	rab11al	100	92.130	ENSATEG00000006156	rab11al	100	92.130	Anabas_testudineus
ENSELUG00000012035	rab11al	100	94.444	ENSACLG00000010268	rab11al	100	94.444	Astatotilapia_calliptera
ENSELUG00000012035	rab11al	94	87.192	ENSAMXG00000024632	rab11al	93	87.192	Astyanax_mexicanus
ENSELUG00000012035	rab11al	94	79.703	ENSCPBG00000025819	-	99	79.703	Chrysemys_picta_bellii
ENSELUG00000012035	rab11al	100	92.593	ENSCSEG00000011996	rab11al	100	92.593	Cynoglossus_semilaevis
ENSELUG00000012035	rab11al	100	91.204	ENSCVAG00000020016	rab11al	100	91.204	Cyprinodon_variegatus
ENSELUG00000012035	rab11al	100	92.593	ENSDARG00000014340	rab11al	100	92.593	Danio_rerio
ENSELUG00000012035	rab11al	99	80.930	ENSFALG00000002594	-	91	80.930	Ficedula_albicollis
ENSELUG00000012035	rab11al	96	91.787	ENSFHEG00000000832	rab11al	99	91.787	Fundulus_heteroclitus
ENSELUG00000012035	rab11al	94	90.099	ENSGMOG00000006450	rab11al	100	90.099	Gadus_morhua
ENSELUG00000012035	rab11al	99	79.535	ENSGALG00000037802	-	50	79.535	Gallus_gallus
ENSELUG00000012035	rab11al	100	91.204	ENSGAFG00000021725	rab11al	100	91.204	Gambusia_affinis
ENSELUG00000012035	rab11al	100	93.056	ENSGACG00000013259	rab11al	100	93.056	Gasterosteus_aculeatus
ENSELUG00000012035	rab11al	99	80.000	ENSGAGG00000020702	-	99	80.000	Gopherus_agassizii
ENSELUG00000012035	rab11al	100	94.444	ENSHBUG00000009333	rab11al	100	94.444	Haplochromis_burtoni
ENSELUG00000012035	rab11al	100	93.519	ENSHCOG00000000232	rab11al	100	93.519	Hippocampus_comes
ENSELUG00000012035	rab11al	100	92.593	ENSIPUG00000006091	RAB11A	100	92.593	Ictalurus_punctatus
ENSELUG00000012035	rab11al	100	89.815	ENSKMAG00000015516	rab11al	100	89.815	Kryptolebias_marmoratus
ENSELUG00000012035	rab11al	100	92.130	ENSLBEG00000016417	rab11al	100	92.130	Labrus_bergylta
ENSELUG00000012035	rab11al	99	82.326	ENSLACG00000011380	rab11al	99	82.326	Latimeria_chalumnae
ENSELUG00000012035	rab11al	100	93.056	ENSLOCG00000008865	rab11al	100	93.056	Lepisosteus_oculatus
ENSELUG00000012035	rab11al	100	93.056	ENSMAMG00000010278	rab11al	100	93.056	Mastacembelus_armatus
ENSELUG00000012035	rab11al	100	94.444	ENSMZEG00005017514	rab11al	100	94.444	Maylandia_zebra
ENSELUG00000012035	rab11al	75	90.062	ENSMGAG00000004720	-	96	90.123	Meleagris_gallopavo
ENSELUG00000012035	rab11al	79	97.661	ENSMMOG00000017117	rab11al	93	90.526	Mola_mola
ENSELUG00000012035	rab11al	100	91.204	ENSMALG00000004093	rab11al	100	91.204	Monopterus_albus
ENSELUG00000012035	rab11al	100	94.907	ENSNBRG00000005116	rab11al	100	94.907	Neolamprologus_brichardi
ENSELUG00000012035	rab11al	100	93.981	ENSONIG00000002281	rab11al	100	93.981	Oreochromis_niloticus
ENSELUG00000012035	rab11al	100	94.444	ENSORLG00000016126	rab11al	100	94.444	Oryzias_latipes
ENSELUG00000012035	rab11al	100	94.444	ENSORLG00020013747	rab11al	100	94.444	Oryzias_latipes_hni
ENSELUG00000012035	rab11al	100	94.444	ENSORLG00015019591	rab11al	100	94.444	Oryzias_latipes_hsok
ENSELUG00000012035	rab11al	100	93.056	ENSOMEG00000020271	rab11al	100	93.056	Oryzias_melastigma
ENSELUG00000012035	rab11al	100	92.130	ENSPKIG00000020893	rab11al	100	92.130	Paramormyrops_kingsleyae
ENSELUG00000012035	rab11al	99	79.535	ENSPSIG00000013143	-	99	79.535	Pelodiscus_sinensis
ENSELUG00000012035	rab11al	100	89.815	ENSPMGG00000004220	rab11al	100	89.815	Periophthalmus_magnuspinnatus
ENSELUG00000012035	rab11al	100	90.278	ENSPFOG00000011316	rab11al	100	90.278	Poecilia_formosa
ENSELUG00000012035	rab11al	100	90.278	ENSPLAG00000007986	rab11al	100	90.278	Poecilia_latipinna
ENSELUG00000012035	rab11al	100	90.278	ENSPMEG00000000804	rab11al	100	90.278	Poecilia_mexicana
ENSELUG00000012035	rab11al	100	90.278	ENSPREG00000017324	rab11al	100	90.278	Poecilia_reticulata
ENSELUG00000012035	rab11al	100	94.444	ENSPNYG00000018244	rab11al	100	94.444	Pundamilia_nyererei
ENSELUG00000012035	rab11al	100	93.981	ENSPNAG00000029085	rab11al	100	93.981	Pygocentrus_nattereri
ENSELUG00000012035	rab11al	100	92.593	ENSSFOG00015008618	rab11al	100	92.593	Scleropages_formosus
ENSELUG00000012035	rab11al	100	92.130	ENSSMAG00000016206	rab11al	100	92.130	Scophthalmus_maximus
ENSELUG00000012035	rab11al	100	93.056	ENSSDUG00000006278	rab11al	100	93.056	Seriola_dumerili
ENSELUG00000012035	rab11al	100	93.056	ENSSLDG00000012116	rab11al	100	93.056	Seriola_lalandi_dorsalis
ENSELUG00000012035	rab11al	99	78.241	ENSSPUG00000002526	-	99	78.241	Sphenodon_punctatus
ENSELUG00000012035	rab11al	100	92.593	ENSSPAG00000012044	rab11al	100	92.593	Stegastes_partitus
ENSELUG00000012035	rab11al	94	83.168	ENSTGUG00000003680	-	99	83.168	Taeniopygia_guttata
ENSELUG00000012035	rab11al	99	91.589	ENSTRUG00000007556	rab11al	99	91.589	Takifugu_rubripes
ENSELUG00000012035	rab11al	100	90.741	ENSXCOG00000004226	rab11al	100	90.741	Xiphophorus_couchianus
ENSELUG00000012035	rab11al	100	90.741	ENSXMAG00000027071	rab11al	100	90.741	Xiphophorus_maculatus