EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000012088 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 11233 bases
Position: chrLG05:23121313-23132545
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000033760	zf-C2H2	PF00096.26	9.9e-28	1	5
ENSELUP00000033760	zf-C2H2	PF00096.26	9.9e-28	2	5
ENSELUP00000033760	zf-C2H2	PF00096.26	9.9e-28	3	5
ENSELUP00000033760	zf-C2H2	PF00096.26	9.9e-28	4	5
ENSELUP00000033760	zf-C2H2	PF00096.26	9.9e-28	5	5
ENSELUP00000033760	zf-met	PF12874.7	0.00032	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000019901	-	5700	-	ENSELUP00000033760	400 (aa)	-	UPI0005774D89

Gene Model

Click here to download ENSELUG00000012088's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000012088's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000012088	-	50	47.561	ENSELUG00000021355	-	95	45.732
ENSELUG00000012088	-	50	45.882	ENSELUG00000021287	-	81	45.882
ENSELUG00000012088	-	98	39.326	ENSELUG00000008171	-	100	46.377
ENSELUG00000012088	-	70	33.333	ENSELUG00000000423	-	86	31.790
ENSELUG00000012088	-	51	45.732	ENSELUG00000012597	-	99	50.505
ENSELUG00000012088	-	52	41.060	ENSELUG00000019008	-	84	42.941
ENSELUG00000012088	-	98	52.830	ENSELUG00000022965	-	94	52.830
ENSELUG00000012088	-	99	45.000	ENSELUG00000008797	-	77	45.000
ENSELUG00000012088	-	63	39.855	ENSELUG00000013806	-	72	40.244
ENSELUG00000012088	-	97	44.172	ENSELUG00000016397	-	91	43.558
ENSELUG00000012088	-	77	37.952	ENSELUG00000006251	ZNF384	78	37.952
ENSELUG00000012088	-	96	45.690	ENSELUG00000013143	-	70	32.493
ENSELUG00000012088	-	62	43.396	ENSELUG00000018405	-	93	43.558
ENSELUG00000012088	-	91	41.058	ENSELUG00000008148	-	99	55.147
ENSELUG00000012088	-	52	42.857	ENSELUG00000017463	-	86	48.315
ENSELUG00000012088	-	57	46.893	ENSELUG00000012986	-	55	46.893
ENSELUG00000012088	-	51	52.439	ENSELUG00000017958	-	68	52.439
ENSELUG00000012088	-	79	42.458	ENSELUG00000020882	-	77	42.458
ENSELUG00000012088	-	52	54.545	ENSELUG00000013094	-	95	54.545
ENSELUG00000012088	-	98	43.827	ENSELUG00000001968	-	99	43.827
ENSELUG00000012088	-	91	43.909	ENSELUG00000008131	-	100	43.909
ENSELUG00000012088	-	64	45.342	ENSELUG00000021499	-	92	56.627
ENSELUG00000012088	-	55	40.000	ENSELUG00000010566	si:dkey-182i3.9	61	40.000
ENSELUG00000012088	-	98	47.581	ENSELUG00000019880	-	99	47.581
ENSELUG00000012088	-	57	45.588	ENSELUG00000021248	-	83	45.588
ENSELUG00000012088	-	56	44.366	ENSELUG00000021242	-	81	44.366
ENSELUG00000012088	-	98	34.826	ENSELUG00000000281	-	78	46.364
ENSELUG00000012088	-	57	44.586	ENSELUG00000021551	-	71	44.586
ENSELUG00000012088	-	51	40.476	ENSELUG00000013064	-	70	40.476
ENSELUG00000012088	-	58	44.444	ENSELUG00000011838	-	65	44.937
ENSELUG00000012088	-	99	43.827	ENSELUG00000005912	-	99	43.827
ENSELUG00000012088	-	61	44.186	ENSELUG00000013796	-	74	44.186
ENSELUG00000012088	-	50	45.283	ENSELUG00000019204	-	90	45.283
ENSELUG00000012088	-	99	45.122	ENSELUG00000022942	-	95	45.122
ENSELUG00000012088	-	51	46.809	ENSELUG00000021229	-	83	47.561

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000012088	-	77	42.424	ENSAPOG00000019138	-	80	42.424	Acanthochromis_polyacanthus
ENSELUG00000012088	-	98	48.113	ENSACIG00000004641	-	96	48.113	Amphilophus_citrinellus
ENSELUG00000012088	-	74	43.919	ENSACIG00000007464	-	79	48.315	Amphilophus_citrinellus
ENSELUG00000012088	-	50	38.926	ENSAOCG00000015944	-	64	38.926	Amphiprion_ocellaris
ENSELUG00000012088	-	50	38.926	ENSAOCG00000014769	-	70	38.926	Amphiprion_ocellaris
ENSELUG00000012088	-	51	50.000	ENSAOCG00000016897	-	84	39.552	Amphiprion_ocellaris
ENSELUG00000012088	-	51	50.000	ENSAPEG00000001556	-	84	49.091	Amphiprion_percula
ENSELUG00000012088	-	53	37.975	ENSAPEG00000010013	-	55	35.366	Amphiprion_percula
ENSELUG00000012088	-	59	44.928	ENSATEG00000018931	-	82	44.928	Anabas_testudineus
ENSELUG00000012088	-	54	40.000	ENSCING00000002128	zf(c2h2)-35	63	40.000	Ciona_intestinalis
ENSELUG00000012088	-	99	49.074	ENSCVAG00000006484	-	96	49.074	Cyprinodon_variegatus
ENSELUG00000012088	-	62	44.928	ENSCVAG00000003250	-	73	45.926	Cyprinodon_variegatus
ENSELUG00000012088	-	58	35.106	ENSEBUG00000011449	-	85	35.106	Eptatretus_burgeri
ENSELUG00000012088	-	98	40.476	ENSGAFG00000008204	-	88	39.286	Gambusia_affinis
ENSELUG00000012088	-	99	41.667	ENSHCOG00000008227	-	94	41.667	Hippocampus_comes
ENSELUG00000012088	-	98	49.091	ENSHCOG00000019389	-	97	49.091	Hippocampus_comes
ENSELUG00000012088	-	99	48.276	ENSHCOG00000008213	-	94	48.276	Hippocampus_comes
ENSELUG00000012088	-	98	35.955	ENSKMAG00000021873	-	99	35.955	Kryptolebias_marmoratus
ENSELUG00000012088	-	52	43.590	ENSLBEG00000007106	-	60	43.590	Labrus_bergylta
ENSELUG00000012088	-	57	42.143	ENSLBEG00000011210	-	62	42.143	Labrus_bergylta
ENSELUG00000012088	-	51	39.080	ENSLOCG00000004208	-	99	41.772	Lepisosteus_oculatus
ENSELUG00000012088	-	63	45.283	ENSMAMG00000017939	-	86	44.444	Mastacembelus_armatus
ENSELUG00000012088	-	53	43.284	ENSMZEG00005013907	-	71	43.284	Maylandia_zebra
ENSELUG00000012088	-	98	47.778	ENSMMOG00000017592	-	91	46.739	Mola_mola
ENSELUG00000012088	-	78	51.087	ENSNBRG00000006112	-	61	51.087	Neolamprologus_brichardi
ENSELUG00000012088	-	55	37.975	ENSONIG00000007967	-	58	37.975	Oreochromis_niloticus
ENSELUG00000012088	-	69	37.356	ENSORLG00000021885	-	88	36.552	Oryzias_latipes
ENSELUG00000012088	-	50	49.425	ENSORLG00015018099	-	64	49.425	Oryzias_latipes_hsok
ENSELUG00000012088	-	62	56.075	ENSOMEG00000019114	-	68	56.075	Oryzias_melastigma
ENSELUG00000012088	-	96	38.889	ENSPKIG00000020222	-	90	38.889	Paramormyrops_kingsleyae
ENSELUG00000012088	-	81	45.652	ENSPFOG00000018860	-	100	45.652	Poecilia_formosa
ENSELUG00000012088	-	98	33.085	ENSPFOG00000009491	-	99	33.085	Poecilia_formosa
ENSELUG00000012088	-	55	41.071	ENSPLAG00000010067	-	71	41.071	Poecilia_latipinna
ENSELUG00000012088	-	98	33.333	ENSPMEG00000024117	-	99	33.333	Poecilia_mexicana
ENSELUG00000012088	-	56	39.773	ENSPREG00000002603	-	57	39.773	Poecilia_reticulata
ENSELUG00000012088	-	53	40.123	ENSSMAG00000013291	-	92	40.123	Scophthalmus_maximus
ENSELUG00000012088	-	78	47.191	ENSSDUG00000020774	-	78	47.191	Seriola_dumerili
ENSELUG00000012088	-	61	42.331	ENSXCOG00000003441	-	79	42.331	Xiphophorus_couchianus