EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000012166 (Gene tree)
Gene ID: 105021598
Gene Symbol: RAB1A
Alias: RAB1|YPT1
Full Name: ras-related protein ORAB-1
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 4789 bases
Position: chrLG09:4680609-4685397
Accession: 105021598
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000011854	MMR_HSR1	PF01926.23	3.7e-05	1	1
ENSELUP00000011838	MMR_HSR1	PF01926.23	6.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000019994	RAB1A-202	642	-	ENSELUP00000011854	213 (aa)	-	-
ENSELUT00000019990	RAB1A-201	3350	XM_010889371	ENSELUP00000011838	263 (aa)	XP_010887673	-

Gene Model

Click here to download ENSELUG00000012166's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000012166's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000012166	RAB1A	75	39.264	ENSELUG00000016682	-	79	39.264
ENSELUG00000012166	RAB1A	81	42.703	ENSELUG00000002575	rab33ba	77	43.243
ENSELUG00000012166	RAB1A	77	36.970	ENSELUG00000003058	KRAS	95	35.359
ENSELUG00000012166	RAB1A	80	34.104	ENSELUG00000006480	rheb	92	34.104
ENSELUG00000012166	RAB1A	77	46.667	ENSELUG00000005989	RAB15	77	46.667
ENSELUG00000012166	RAB1A	77	47.239	ENSELUG00000018516	rab5c	90	44.162
ENSELUG00000012166	RAB1A	95	46.667	ENSELUG00000000916	-	94	56.154
ENSELUG00000012166	RAB1A	74	38.509	ENSELUG00000005597	rab34b	62	38.509
ENSELUG00000012166	RAB1A	96	95.098	ENSELUG00000015413	rab1ab	100	95.098
ENSELUG00000012166	RAB1A	75	39.264	ENSELUG00000006539	RAB7A	79	39.264
ENSELUG00000012166	RAB1A	77	45.833	ENSELUG00000013219	rab33a	70	45.833
ENSELUG00000012166	RAB1A	73	39.623	ENSELUG00000021199	RAB9A	73	39.623
ENSELUG00000012166	RAB1A	98	44.231	ENSELUG00000013571	-	93	45.320
ENSELUG00000012166	RAB1A	92	43.367	ENSELUG00000013436	rab5ab	89	43.367
ENSELUG00000012166	RAB1A	77	34.731	ENSELUG00000005090	si:ch73-116o1.2	70	34.731
ENSELUG00000012166	RAB1A	92	42.929	ENSELUG00000010439	-	89	42.929
ENSELUG00000012166	RAB1A	84	47.753	ENSELUG00000012060	rab25b	84	47.753
ENSELUG00000012166	RAB1A	83	43.820	ENSELUG00000013957	-	84	43.820
ENSELUG00000012166	RAB1A	89	47.692	ENSELUG00000021148	rab11bb	91	47.208
ENSELUG00000012166	RAB1A	96	90.196	ENSELUG00000023815	-	100	90.196
ENSELUG00000012166	RAB1A	73	37.736	ENSELUG00000016622	rab9a	79	37.736
ENSELUG00000012166	RAB1A	76	38.323	ENSELUG00000004378	rab9b	82	38.323
ENSELUG00000012166	RAB1A	77	40.964	ENSELUG00000023120	-	78	40.964
ENSELUG00000012166	RAB1A	83	43.820	ENSELUG00000005304	rab39ba	84	43.820
ENSELUG00000012166	RAB1A	74	38.650	ENSELUG00000022157	rab34a	61	38.650
ENSELUG00000012166	RAB1A	84	31.892	ENSELUG00000013666	si:cabz01085950.1	94	30.808
ENSELUG00000012166	RAB1A	56	31.667	ENSELUG00000009390	arl8ba	62	31.667
ENSELUG00000012166	RAB1A	92	38.265	ENSELUG00000008876	rab6a	93	38.265
ENSELUG00000012166	RAB1A	55	31.092	ENSELUG00000004400	arl4cb	61	31.092
ENSELUG00000012166	RAB1A	77	33.533	ENSELUG00000016028	rhebl1	90	33.533
ENSELUG00000012166	RAB1A	96	91.667	ENSELUG00000012428	-	100	91.667
ENSELUG00000012166	RAB1A	83	41.011	ENSELUG00000010345	rab42a	82	41.011
ENSELUG00000012166	RAB1A	71	32.895	ENSELUG00000008604	rras2	81	33.537
ENSELUG00000012166	RAB1A	92	36.224	ENSELUG00000001257	rab6ba	93	36.224
ENSELUG00000012166	RAB1A	57	30.075	ENSELUG00000013412	arfrp1	65	30.075
ENSELUG00000012166	RAB1A	84	46.629	ENSELUG00000006604	rab25a	84	46.629
ENSELUG00000012166	RAB1A	79	36.923	ENSELUG00000011352	-	76	36.923
ENSELUG00000012166	RAB1A	94	76.617	ENSELUG00000011680	zgc:171927	94	76.238
ENSELUG00000012166	RAB1A	55	31.405	ENSELUG00000015699	arl4ca	62	31.405
ENSELUG00000012166	RAB1A	64	30.882	ENSELUG00000004092	rab20	50	30.882
ENSELUG00000012166	RAB1A	95	46.190	ENSELUG00000020948	-	95	57.258
ENSELUG00000012166	RAB1A	87	48.108	ENSELUG00000023964	rab2a	99	45.238
ENSELUG00000012166	RAB1A	75	39.264	ENSELUG00000000175	zgc:100918	80	39.264
ENSELUG00000012166	RAB1A	79	47.929	ENSELUG00000020012	rab15	80	47.929
ENSELUG00000012166	RAB1A	78	51.205	ENSELUG00000022997	rab30	82	51.205
ENSELUG00000012166	RAB1A	72	34.641	ENSELUG00000020788	rab23	73	32.948
ENSELUG00000012166	RAB1A	85	56.216	ENSELUG00000023247	si:dkey-16l2.16	88	56.216
ENSELUG00000012166	RAB1A	76	51.235	ENSELUG00000003805	rab18a	79	51.235
ENSELUG00000012166	RAB1A	58	31.783	ENSELUG00000023460	-	62	32.558
ENSELUG00000012166	RAB1A	91	49.744	ENSELUG00000012801	rab13	100	50.000
ENSELUG00000012166	RAB1A	92	37.755	ENSELUG00000015343	rab22a	97	37.755
ENSELUG00000012166	RAB1A	79	51.479	ENSELUG00000007123	rab12	70	51.479
ENSELUG00000012166	RAB1A	80	52.353	ENSELUG00000019240	-	87	52.353
ENSELUG00000012166	RAB1A	95	48.325	ENSELUG00000002999	rab11a	92	54.135
ENSELUG00000012166	RAB1A	81	35.593	ENSELUG00000004712	HRAS	93	35.593
ENSELUG00000012166	RAB1A	80	33.140	ENSELUG00000018367	rheb	92	33.140
ENSELUG00000012166	RAB1A	93	46.000	ENSELUG00000016450	rab18b	96	46.000
ENSELUG00000012166	RAB1A	55	33.051	ENSELUG00000003770	arl8a	61	33.051
ENSELUG00000012166	RAB1A	92	43.434	ENSELUG00000006462	rab5aa	89	43.434
ENSELUG00000012166	RAB1A	89	31.771	ENSELUG00000017558	mras	91	31.771
ENSELUG00000012166	RAB1A	95	40.845	ENSELUG00000014785	rab4a	100	40.845
ENSELUG00000012166	RAB1A	55	33.898	ENSELUG00000010736	arl8a	61	33.898
ENSELUG00000012166	RAB1A	94	45.894	ENSELUG00000012035	rab11al	96	45.894
ENSELUG00000012166	RAB1A	92	36.735	ENSELUG00000022470	rab6bb	93	36.735
ENSELUG00000012166	RAB1A	74	44.099	ENSELUG00000018921	rab36	61	44.099
ENSELUG00000012166	RAB1A	98	44.231	ENSELUG00000009832	rab14	94	44.231
ENSELUG00000012166	RAB1A	76	65.432	ENSELUG00000023972	rab35	100	54.902
ENSELUG00000012166	RAB1A	66	30.496	ENSELUG00000018031	arl3	70	30.986

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000012166	RAB1A	96	95.588	ENSG00000138069	RAB1A	98	100.000	Homo_sapiens
ENSELUG00000012166	RAB1A	96	96.569	ENSAPOG00000008143	-	100	96.569	Acanthochromis_polyacanthus
ENSELUG00000012166	RAB1A	96	95.588	ENSAMEG00000001127	RAB1A	99	95.588	Ailuropoda_melanoleuca
ENSELUG00000012166	RAB1A	96	96.569	ENSAOCG00000020606	-	100	96.569	Amphiprion_ocellaris
ENSELUG00000012166	RAB1A	96	96.569	ENSAPEG00000022488	-	100	96.569	Amphiprion_percula
ENSELUG00000012166	RAB1A	96	95.588	ENSANAG00000020929	RAB1A	99	95.588	Aotus_nancymaae
ENSELUG00000012166	RAB1A	96	96.078	ENSACLG00000003326	-	100	96.078	Astatotilapia_calliptera
ENSELUG00000012166	RAB1A	96	93.627	ENSAMXG00000034850	-	100	93.627	Astyanax_mexicanus
ENSELUG00000012166	RAB1A	96	95.588	ENSBTAG00000016720	RAB1A	99	95.588	Bos_taurus
ENSELUG00000012166	RAB1A	96	95.588	ENSCJAG00000046275	RAB1A	99	95.588	Callithrix_jacchus
ENSELUG00000012166	RAB1A	96	95.588	ENSCAFG00000003187	RAB1A	99	95.588	Canis_familiaris
ENSELUG00000012166	RAB1A	96	95.588	ENSCAFG00020026971	RAB1A	99	95.588	Canis_lupus_dingo
ENSELUG00000012166	RAB1A	93	95.477	ENSCHIG00000014060	RAB1A	96	95.477	Capra_hircus
ENSELUG00000012166	RAB1A	96	94.118	ENSTSYG00000005996	RAB1A	100	95.477	Carlito_syrichta
ENSELUG00000012166	RAB1A	96	95.588	ENSCPOG00000015437	RAB1A	99	95.588	Cavia_porcellus
ENSELUG00000012166	RAB1A	96	95.588	ENSCCAG00000021869	RAB1A	99	95.588	Cebus_capucinus
ENSELUG00000012166	RAB1A	96	95.588	ENSCATG00000030853	RAB1A	99	95.588	Cercocebus_atys
ENSELUG00000012166	RAB1A	96	95.588	ENSCLAG00000014766	RAB1A	99	95.588	Chinchilla_lanigera
ENSELUG00000012166	RAB1A	96	95.588	ENSCPBG00000013243	RAB1A	99	95.588	Chrysemys_picta_bellii
ENSELUG00000012166	RAB1A	96	93.137	ENSCANG00000035916	RAB1A	99	93.137	Colobus_angolensis_palliatus
ENSELUG00000012166	RAB1A	96	95.588	ENSCGRG00001012691	-	99	95.588	Cricetulus_griseus_chok1gshd
ENSELUG00000012166	RAB1A	96	95.588	ENSCGRG00000008456	-	99	95.588	Cricetulus_griseus_crigri
ENSELUG00000012166	RAB1A	96	95.588	ENSDNOG00000018236	RAB1A	99	95.588	Dasypus_novemcinctus
ENSELUG00000012166	RAB1A	96	95.588	ENSDORG00000028628	-	99	95.588	Dipodomys_ordii
ENSELUG00000012166	RAB1A	96	83.902	FBgn0285937	Rab1	99	83.902	Drosophila_melanogaster
ENSELUG00000012166	RAB1A	96	95.588	ENSETEG00000002205	RAB1A	100	95.588	Echinops_telfairi
ENSELUG00000012166	RAB1A	96	95.588	ENSEASG00005007298	RAB1A	99	95.588	Equus_asinus_asinus
ENSELUG00000012166	RAB1A	96	95.588	ENSECAG00000009926	RAB1A	99	95.588	Equus_caballus
ENSELUG00000012166	RAB1A	96	95.588	ENSEEUG00000011721	RAB1A	100	95.588	Erinaceus_europaeus
ENSELUG00000012166	RAB1A	96	95.588	ENSFCAG00000002536	RAB1A	99	95.588	Felis_catus
ENSELUG00000012166	RAB1A	96	93.627	ENSFALG00000013624	RAB1A	99	93.627	Ficedula_albicollis
ENSELUG00000012166	RAB1A	96	95.588	ENSFDAG00000019505	-	99	95.588	Fukomys_damarensis
ENSELUG00000012166	RAB1A	96	96.078	ENSFHEG00000014414	-	100	96.078	Fundulus_heteroclitus
ENSELUG00000012166	RAB1A	96	95.588	ENSGALG00000031582	RAB1A	99	95.588	Gallus_gallus
ENSELUG00000012166	RAB1A	96	94.118	ENSGAFG00000000918	-	100	94.118	Gambusia_affinis
ENSELUG00000012166	RAB1A	96	95.588	ENSGAGG00000006802	RAB1A	99	95.588	Gopherus_agassizii
ENSELUG00000012166	RAB1A	96	95.588	ENSGGOG00000026603	RAB1A	99	95.588	Gorilla_gorilla
ENSELUG00000012166	RAB1A	96	95.588	ENSHGLG00000013585	RAB1A	99	95.588	Heterocephalus_glaber_female
ENSELUG00000012166	RAB1A	96	94.118	ENSHGLG00100007994	RAB1A	99	94.118	Heterocephalus_glaber_male
ENSELUG00000012166	RAB1A	96	95.588	ENSSTOG00000020693	-	99	95.588	Ictidomys_tridecemlineatus
ENSELUG00000012166	RAB1A	93	95.477	ENSJJAG00000014396	Rab1a	100	95.477	Jaculus_jaculus
ENSELUG00000012166	RAB1A	93	96.482	ENSKMAG00000014038	-	93	96.482	Kryptolebias_marmoratus
ENSELUG00000012166	RAB1A	96	96.078	ENSLBEG00000028426	RAB1A	100	96.078	Labrus_bergylta
ENSELUG00000012166	RAB1A	96	96.569	ENSLACG00000012869	RAB1A	99	96.569	Latimeria_chalumnae
ENSELUG00000012166	RAB1A	96	95.588	ENSLAFG00000016666	RAB1A	99	95.588	Loxodonta_africana
ENSELUG00000012166	RAB1A	96	95.588	ENSMFAG00000046246	RAB1A	99	95.588	Macaca_fascicularis
ENSELUG00000012166	RAB1A	93	95.477	ENSMMUG00000021721	RAB1A	91	95.477	Macaca_mulatta
ENSELUG00000012166	RAB1A	90	96.859	ENSMNEG00000028414	-	96	96.859	Macaca_nemestrina
ENSELUG00000012166	RAB1A	96	95.588	ENSMLEG00000042535	RAB1A	99	95.588	Mandrillus_leucophaeus
ENSELUG00000012166	RAB1A	96	96.078	ENSMZEG00005013959	-	100	96.078	Maylandia_zebra
ENSELUG00000012166	RAB1A	93	95.477	ENSMGAG00000004611	RAB1A	98	95.477	Meleagris_gallopavo
ENSELUG00000012166	RAB1A	96	95.098	ENSMAUG00000012156	Rab1a	99	95.098	Mesocricetus_auratus
ENSELUG00000012166	RAB1A	96	95.588	ENSMICG00000012587	RAB1A	99	95.588	Microcebus_murinus
ENSELUG00000012166	RAB1A	96	95.098	ENSMOCG00000017022	Rab1a	99	95.098	Microtus_ochrogaster
ENSELUG00000012166	RAB1A	96	94.118	ENSMMOG00000018709	RAB1A	100	94.118	Mola_mola
ENSELUG00000012166	RAB1A	96	95.588	ENSMODG00000003340	RAB1A	99	95.588	Monodelphis_domestica
ENSELUG00000012166	RAB1A	96	95.588	MGP_CAROLIEiJ_G0016115	Rab1a	99	95.588	Mus_caroli
ENSELUG00000012166	RAB1A	96	95.588	ENSMUSG00000020149	Rab1a	100	95.588	Mus_musculus
ENSELUG00000012166	RAB1A	96	95.588	MGP_PahariEiJ_G0016776	Rab1a	99	95.588	Mus_pahari
ENSELUG00000012166	RAB1A	96	95.588	MGP_SPRETEiJ_G0016958	Rab1a	100	95.588	Mus_spretus
ENSELUG00000012166	RAB1A	96	95.588	ENSMPUG00000006139	RAB1A	80	95.588	Mustela_putorius_furo
ENSELUG00000012166	RAB1A	96	95.588	ENSMLUG00000009489	RAB1A	99	95.588	Myotis_lucifugus
ENSELUG00000012166	RAB1A	96	95.588	ENSNGAG00000005838	Rab1a	99	95.588	Nannospalax_galili
ENSELUG00000012166	RAB1A	96	96.078	ENSNBRG00000020492	-	100	96.078	Neolamprologus_brichardi
ENSELUG00000012166	RAB1A	93	95.477	ENSOPRG00000006595	RAB1A	100	95.477	Ochotona_princeps
ENSELUG00000012166	RAB1A	90	95.288	ENSODEG00000011248	-	96	95.361	Octodon_degus
ENSELUG00000012166	RAB1A	96	94.118	ENSONIG00000006819	-	99	94.118	Oreochromis_niloticus
ENSELUG00000012166	RAB1A	96	95.588	ENSOANG00000012438	RAB1A	99	95.588	Ornithorhynchus_anatinus
ENSELUG00000012166	RAB1A	96	95.588	ENSOCUG00000017003	RAB1A	99	95.588	Oryctolagus_cuniculus
ENSELUG00000012166	RAB1A	96	95.588	ENSOGAG00000026181	RAB1A	99	95.588	Otolemur_garnettii
ENSELUG00000012166	RAB1A	93	95.477	ENSOARG00000019997	RAB1A	97	95.477	Ovis_aries
ENSELUG00000012166	RAB1A	96	95.588	ENSPPAG00000030253	RAB1A	100	95.588	Pan_paniscus
ENSELUG00000012166	RAB1A	96	95.588	ENSPPRG00000025077	RAB1A	99	95.588	Panthera_pardus
ENSELUG00000012166	RAB1A	93	95.477	ENSPTIG00000013471	RAB1A	97	95.477	Panthera_tigris_altaica
ENSELUG00000012166	RAB1A	96	95.588	ENSPTRG00000011989	RAB1A	99	95.588	Pan_troglodytes
ENSELUG00000012166	RAB1A	96	95.588	ENSPANG00000010485	RAB1A	99	95.588	Papio_anubis
ENSELUG00000012166	RAB1A	96	93.137	ENSPSIG00000008028	RAB1A	99	93.137	Pelodiscus_sinensis
ENSELUG00000012166	RAB1A	96	96.078	ENSPMGG00000021015	-	99	96.078	Periophthalmus_magnuspinnatus
ENSELUG00000012166	RAB1A	96	95.588	ENSPEMG00000009340	Rab1a	99	95.588	Peromyscus_maniculatus_bairdii
ENSELUG00000012166	RAB1A	96	95.588	ENSPCIG00000023212	RAB1A	99	95.588	Phascolarctos_cinereus
ENSELUG00000012166	RAB1A	96	93.627	ENSPFOG00000000498	-	98	93.627	Poecilia_formosa
ENSELUG00000012166	RAB1A	96	93.627	ENSPLAG00000015592	-	100	93.627	Poecilia_latipinna
ENSELUG00000012166	RAB1A	96	93.627	ENSPMEG00000005288	-	100	93.627	Poecilia_mexicana
ENSELUG00000012166	RAB1A	96	95.588	ENSPPYG00000012360	RAB1A	99	95.588	Pongo_abelii
ENSELUG00000012166	RAB1A	96	95.588	ENSPCOG00000017244	RAB1A	99	95.588	Propithecus_coquereli
ENSELUG00000012166	RAB1A	96	96.078	ENSPNYG00000015841	-	100	96.078	Pundamilia_nyererei
ENSELUG00000012166	RAB1A	96	95.588	ENSRNOG00000004992	Rab1a	99	95.588	Rattus_norvegicus
ENSELUG00000012166	RAB1A	96	95.588	ENSSBOG00000023732	RAB1A	99	95.588	Saimiri_boliviensis_boliviensis
ENSELUG00000012166	RAB1A	95	94.089	ENSSHAG00000003597	RAB1A	98	94.089	Sarcophilus_harrisii
ENSELUG00000012166	RAB1A	96	96.569	ENSSMAG00000021049	-	100	96.569	Scophthalmus_maximus
ENSELUG00000012166	RAB1A	96	96.078	ENSSDUG00000022535	RAB1A	100	96.078	Seriola_dumerili
ENSELUG00000012166	RAB1A	96	95.588	ENSSPUG00000012822	RAB1A	99	95.588	Sphenodon_punctatus
ENSELUG00000012166	RAB1A	96	96.569	ENSSPAG00000012564	-	100	96.569	Stegastes_partitus
ENSELUG00000012166	RAB1A	96	95.588	ENSSSCG00000008359	RAB1A	100	95.477	Sus_scrofa
ENSELUG00000012166	RAB1A	96	93.627	ENSTGUG00000002328	RAB1A	99	93.627	Taeniopygia_guttata
ENSELUG00000012166	RAB1A	96	96.078	ENSTRUG00000024994	RAB1A	100	96.078	Takifugu_rubripes
ENSELUG00000012166	RAB1A	93	95.477	ENSUMAG00000021038	RAB1A	99	95.477	Ursus_maritimus
ENSELUG00000012166	RAB1A	94	95.000	ENSVPAG00000005640	RAB1A	99	95.000	Vicugna_pacos
ENSELUG00000012166	RAB1A	96	95.588	ENSVVUG00000027588	RAB1A	99	95.588	Vulpes_vulpes
ENSELUG00000012166	RAB1A	96	94.118	ENSXMAG00000015776	-	100	94.118	Xiphophorus_maculatus