EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000012193 (Gene tree)
Gene ID: -
Gene Symbol: si:dkey-85a20.4
Alias: -
Full Name: TAR (HIV-1) RNA binding protein 1
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 35914 bases
Position: chrLG05:6856219-6892132
Accession: 105008044
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000033808	SpoU_methylase	PF00588.19	4.1e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000019999	-	4695	XM_020046879	ENSELUP00000033808	1564 (aa)	XP_019902438	-

Gene Model

Click here to download ENSELUG00000012193's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000012193's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000012193	si:dkey-85a20.4	86	44.657	ENSG00000059588	TARBP1	85	44.657	Homo_sapiens
ENSELUG00000012193	si:dkey-85a20.4	99	62.301	ENSAPOG00000016419	si:dkey-85a20.4	99	62.301	Acanthochromis_polyacanthus
ENSELUG00000012193	si:dkey-85a20.4	85	44.253	ENSAMEG00000003359	TARBP1	99	44.253	Ailuropoda_melanoleuca
ENSELUG00000012193	si:dkey-85a20.4	99	60.830	ENSATEG00000020266	si:dkey-85a20.4	99	60.891	Anabas_testudineus
ENSELUG00000012193	si:dkey-85a20.4	84	45.022	ENSAPLG00000007666	TARBP1	99	45.626	Anas_platyrhynchos
ENSELUG00000012193	si:dkey-85a20.4	85	43.043	ENSACAG00000001142	TARBP1	99	40.086	Anolis_carolinensis
ENSELUG00000012193	si:dkey-85a20.4	87	44.382	ENSANAG00000022031	TARBP1	88	44.312	Aotus_nancymaae
ENSELUG00000012193	si:dkey-85a20.4	86	44.554	ENSBTAG00000004517	TARBP1	98	52.372	Bos_taurus
ENSELUG00000012193	si:dkey-85a20.4	87	44.944	ENSCJAG00000018155	TARBP1	86	44.874	Callithrix_jacchus
ENSELUG00000012193	si:dkey-85a20.4	86	44.272	ENSCAFG00000011533	TARBP1	97	44.272	Canis_familiaris
ENSELUG00000012193	si:dkey-85a20.4	86	44.334	ENSCAFG00020027141	TARBP1	85	44.263	Canis_lupus_dingo
ENSELUG00000012193	si:dkey-85a20.4	86	44.199	ENSCHIG00000011437	TARBP1	99	41.205	Capra_hircus
ENSELUG00000012193	si:dkey-85a20.4	82	44.743	ENSTSYG00000010382	TARBP1	97	44.817	Carlito_syrichta
ENSELUG00000012193	si:dkey-85a20.4	79	41.647	ENSCAPG00000010831	TARBP1	99	41.414	Cavia_aperea
ENSELUG00000012193	si:dkey-85a20.4	86	44.429	ENSCPOG00000013995	TARBP1	86	44.374	Cavia_porcellus
ENSELUG00000012193	si:dkey-85a20.4	86	45.364	ENSCCAG00000037278	TARBP1	85	45.364	Cebus_capucinus
ENSELUG00000012193	si:dkey-85a20.4	86	44.852	ENSCATG00000011754	TARBP1	85	44.742	Cercocebus_atys
ENSELUG00000012193	si:dkey-85a20.4	81	44.511	ENSCLAG00000003655	TARBP1	95	44.511	Chinchilla_lanigera
ENSELUG00000012193	si:dkey-85a20.4	80	45.719	ENSCSAG00000010100	TARBP1	99	45.719	Chlorocebus_sabaeus
ENSELUG00000012193	si:dkey-85a20.4	77	49.062	ENSCPBG00000005587	TARBP1	85	48.974	Chrysemys_picta_bellii
ENSELUG00000012193	si:dkey-85a20.4	84	45.217	ENSCANG00000034343	TARBP1	99	45.217	Colobus_angolensis_palliatus
ENSELUG00000012193	si:dkey-85a20.4	86	44.186	ENSCGRG00001016690	Tarbp1	87	44.116	Cricetulus_griseus_chok1gshd
ENSELUG00000012193	si:dkey-85a20.4	84	44.644	ENSCGRG00000016893	Tarbp1	91	44.644	Cricetulus_griseus_crigri
ENSELUG00000012193	si:dkey-85a20.4	99	55.953	ENSCSEG00000005255	si:dkey-85a20.4	99	58.014	Cynoglossus_semilaevis
ENSELUG00000012193	si:dkey-85a20.4	99	57.826	ENSDARG00000079055	si:dkey-85a20.4	97	70.224	Danio_rerio
ENSELUG00000012193	si:dkey-85a20.4	86	44.093	ENSDNOG00000008637	TARBP1	84	44.163	Dasypus_novemcinctus
ENSELUG00000012193	si:dkey-85a20.4	81	44.671	ENSDORG00000007984	Tarbp1	99	44.747	Dipodomys_ordii
ENSELUG00000012193	si:dkey-85a20.4	86	44.554	ENSEASG00005000252	TARBP1	86	44.515	Equus_asinus_asinus
ENSELUG00000012193	si:dkey-85a20.4	86	45.053	ENSECAG00000023673	TARBP1	85	45.053	Equus_caballus
ENSELUG00000012193	si:dkey-85a20.4	86	42.403	ENSFCAG00000014183	TARBP1	84	42.403	Felis_catus
ENSELUG00000012193	si:dkey-85a20.4	81	46.061	ENSFALG00000013565	TARBP1	99	45.441	Ficedula_albicollis
ENSELUG00000012193	si:dkey-85a20.4	80	43.651	ENSFDAG00000001308	TARBP1	99	43.797	Fukomys_damarensis
ENSELUG00000012193	si:dkey-85a20.4	99	53.565	ENSFHEG00000007565	si:dkey-85a20.4	94	69.067	Fundulus_heteroclitus
ENSELUG00000012193	si:dkey-85a20.4	86	60.740	ENSGMOG00000004549	si:dkey-85a20.4	99	60.882	Gadus_morhua
ENSELUG00000012193	si:dkey-85a20.4	85	43.096	ENSGALG00000011000	TARBP1	86	43.295	Gallus_gallus
ENSELUG00000012193	si:dkey-85a20.4	99	57.440	ENSGAFG00000007387	si:dkey-85a20.4	99	57.440	Gambusia_affinis
ENSELUG00000012193	si:dkey-85a20.4	86	64.331	ENSGACG00000005865	si:dkey-85a20.4	98	64.402	Gasterosteus_aculeatus
ENSELUG00000012193	si:dkey-85a20.4	85	45.357	ENSGAGG00000012102	TARBP1	89	45.487	Gopherus_agassizii
ENSELUG00000012193	si:dkey-85a20.4	85	43.745	ENSGGOG00000022879	TARBP1	98	43.745	Gorilla_gorilla
ENSELUG00000012193	si:dkey-85a20.4	99	61.425	ENSHBUG00000008877	si:dkey-85a20.4	99	61.425	Haplochromis_burtoni
ENSELUG00000012193	si:dkey-85a20.4	86	44.350	ENSHGLG00000011592	TARBP1	99	41.133	Heterocephalus_glaber_female
ENSELUG00000012193	si:dkey-85a20.4	86	44.579	ENSHGLG00100015169	TARBP1	94	44.508	Heterocephalus_glaber_male
ENSELUG00000012193	si:dkey-85a20.4	97	58.984	ENSIPUG00000005249	si:dkey-85a20.4	93	58.984	Ictalurus_punctatus
ENSELUG00000012193	si:dkey-85a20.4	83	45.614	ENSSTOG00000032291	TARBP1	95	45.833	Ictidomys_tridecemlineatus
ENSELUG00000012193	si:dkey-85a20.4	85	42.562	ENSJJAG00000017840	Tarbp1	94	42.705	Jaculus_jaculus
ENSELUG00000012193	si:dkey-85a20.4	83	63.699	ENSKMAG00000017546	si:dkey-85a20.4	98	55.876	Kryptolebias_marmoratus
ENSELUG00000012193	si:dkey-85a20.4	80	67.760	ENSLBEG00000012132	si:dkey-85a20.4	87	67.760	Labrus_bergylta
ENSELUG00000012193	si:dkey-85a20.4	99	40.347	ENSLACG00000004337	TARBP1	99	40.406	Latimeria_chalumnae
ENSELUG00000012193	si:dkey-85a20.4	99	53.186	ENSLOCG00000016214	si:dkey-85a20.4	99	53.186	Lepisosteus_oculatus
ENSELUG00000012193	si:dkey-85a20.4	86	43.975	ENSLAFG00000011394	TARBP1	88	43.975	Loxodonta_africana
ENSELUG00000012193	si:dkey-85a20.4	86	43.472	ENSMMUG00000021703	TARBP1	85	43.472	Macaca_mulatta
ENSELUG00000012193	si:dkey-85a20.4	86	44.570	ENSMNEG00000045002	TARBP1	85	44.570	Macaca_nemestrina
ENSELUG00000012193	si:dkey-85a20.4	84	45.098	ENSMLEG00000044182	TARBP1	99	45.098	Mandrillus_leucophaeus
ENSELUG00000012193	si:dkey-85a20.4	99	62.226	ENSMAMG00000021760	si:dkey-85a20.4	99	62.196	Mastacembelus_armatus
ENSELUG00000012193	si:dkey-85a20.4	99	61.217	ENSMZEG00005005751	si:dkey-85a20.4	99	61.217	Maylandia_zebra
ENSELUG00000012193	si:dkey-85a20.4	86	44.138	ENSMAUG00000020968	Tarbp1	87	44.138	Mesocricetus_auratus
ENSELUG00000012193	si:dkey-85a20.4	86	40.539	ENSMICG00000015280	TARBP1	98	38.121	Microcebus_murinus
ENSELUG00000012193	si:dkey-85a20.4	86	44.499	ENSMOCG00000004128	Tarbp1	87	44.499	Microtus_ochrogaster
ENSELUG00000012193	si:dkey-85a20.4	99	59.358	ENSMMOG00000007795	si:dkey-85a20.4	99	59.666	Mola_mola
ENSELUG00000012193	si:dkey-85a20.4	86	44.170	ENSMODG00000008504	TARBP1	89	42.622	Monodelphis_domestica
ENSELUG00000012193	si:dkey-85a20.4	99	61.500	ENSMALG00000002916	si:dkey-85a20.4	99	61.822	Monopterus_albus
ENSELUG00000012193	si:dkey-85a20.4	99	40.549	MGP_CAROLIEiJ_G0031729	Tarbp1	99	40.671	Mus_caroli
ENSELUG00000012193	si:dkey-85a20.4	86	43.966	ENSMUSG00000090290	Tarbp1	99	40.657	Mus_musculus
ENSELUG00000012193	si:dkey-85a20.4	99	41.033	MGP_PahariEiJ_G0023326	Tarbp1	99	41.094	Mus_pahari
ENSELUG00000012193	si:dkey-85a20.4	86	44.248	MGP_SPRETEiJ_G0032846	Tarbp1	99	41.023	Mus_spretus
ENSELUG00000012193	si:dkey-85a20.4	77	45.548	ENSMPUG00000002802	TARBP1	99	45.787	Mustela_putorius_furo
ENSELUG00000012193	si:dkey-85a20.4	84	44.548	ENSMLUG00000002414	TARBP1	98	44.405	Myotis_lucifugus
ENSELUG00000012193	si:dkey-85a20.4	86	44.940	ENSNLEG00000002518	TARBP1	85	44.940	Nomascus_leucogenys
ENSELUG00000012193	si:dkey-85a20.4	52	54.741	ENSMEUG00000011370	-	64	54.741	Notamacropus_eugenii
ENSELUG00000012193	si:dkey-85a20.4	71	50.497	ENSOPRG00000013822	TARBP1	68	50.497	Ochotona_princeps
ENSELUG00000012193	si:dkey-85a20.4	86	44.216	ENSODEG00000005238	TARBP1	89	44.145	Octodon_degus
ENSELUG00000012193	si:dkey-85a20.4	86	64.194	ENSONIG00000009789	si:dkey-85a20.4	99	64.194	Oreochromis_niloticus
ENSELUG00000012193	si:dkey-85a20.4	86	43.997	ENSOCUG00000017418	TARBP1	84	43.997	Oryctolagus_cuniculus
ENSELUG00000012193	si:dkey-85a20.4	99	57.946	ENSORLG00000010529	si:dkey-85a20.4	99	58.088	Oryzias_latipes
ENSELUG00000012193	si:dkey-85a20.4	99	58.277	ENSORLG00020019264	si:dkey-85a20.4	99	58.420	Oryzias_latipes_hni
ENSELUG00000012193	si:dkey-85a20.4	99	57.956	ENSORLG00015003276	si:dkey-85a20.4	99	58.098	Oryzias_latipes_hsok
ENSELUG00000012193	si:dkey-85a20.4	86	42.908	ENSOGAG00000002379	TARBP1	85	42.908	Otolemur_garnettii
ENSELUG00000012193	si:dkey-85a20.4	86	44.350	ENSOARG00000003434	TARBP1	91	44.571	Ovis_aries
ENSELUG00000012193	si:dkey-85a20.4	84	45.362	ENSPPAG00000028097	TARBP1	99	45.362	Pan_paniscus
ENSELUG00000012193	si:dkey-85a20.4	85	42.383	ENSPPRG00000013561	TARBP1	87	42.383	Panthera_pardus
ENSELUG00000012193	si:dkey-85a20.4	83	43.883	ENSPTIG00000009281	TARBP1	99	43.883	Panthera_tigris_altaica
ENSELUG00000012193	si:dkey-85a20.4	86	44.798	ENSPTRG00000002124	TARBP1	85	44.798	Pan_troglodytes
ENSELUG00000012193	si:dkey-85a20.4	86	44.601	ENSPANG00000021933	TARBP1	85	44.601	Papio_anubis
ENSELUG00000012193	si:dkey-85a20.4	99	58.612	ENSPKIG00000016716	si:dkey-85a20.4	99	58.612	Paramormyrops_kingsleyae
ENSELUG00000012193	si:dkey-85a20.4	80	45.300	ENSPSIG00000010699	TARBP1	99	45.223	Pelodiscus_sinensis
ENSELUG00000012193	si:dkey-85a20.4	86	44.429	ENSPEMG00000006888	Tarbp1	91	44.429	Peromyscus_maniculatus_bairdii
ENSELUG00000012193	si:dkey-85a20.4	77	69.189	ENSPCIG00000029710	TARBP1	81	69.189	Phascolarctos_cinereus
ENSELUG00000012193	si:dkey-85a20.4	86	61.803	ENSPFOG00000013020	si:dkey-85a20.4	98	61.874	Poecilia_formosa
ENSELUG00000012193	si:dkey-85a20.4	99	58.175	ENSPLAG00000006044	si:dkey-85a20.4	99	58.175	Poecilia_latipinna
ENSELUG00000012193	si:dkey-85a20.4	99	58.175	ENSPMEG00000017857	si:dkey-85a20.4	99	58.175	Poecilia_mexicana
ENSELUG00000012193	si:dkey-85a20.4	99	57.808	ENSPREG00000022753	si:dkey-85a20.4	99	57.808	Poecilia_reticulata
ENSELUG00000012193	si:dkey-85a20.4	77	44.809	ENSPPYG00000000102	TARBP1	84	44.809	Pongo_abelii
ENSELUG00000012193	si:dkey-85a20.4	66	75.362	ENSPCAG00000004808	TARBP1	80	75.362	Procavia_capensis
ENSELUG00000012193	si:dkey-85a20.4	86	42.807	ENSPCOG00000005666	TARBP1	99	40.219	Propithecus_coquereli
ENSELUG00000012193	si:dkey-85a20.4	81	59.410	ENSPVAG00000014798	TARBP1	95	57.338	Pteropus_vampyrus
ENSELUG00000012193	si:dkey-85a20.4	99	59.469	ENSPNYG00000019135	si:dkey-85a20.4	99	59.074	Pundamilia_nyererei
ENSELUG00000012193	si:dkey-85a20.4	99	39.327	ENSRNOG00000053574	Tarbp1	99	39.314	Rattus_norvegicus
ENSELUG00000012193	si:dkey-85a20.4	86	42.484	ENSRBIG00000043362	TARBP1	93	42.766	Rhinopithecus_bieti
ENSELUG00000012193	si:dkey-85a20.4	86	45.063	ENSRROG00000029527	TARBP1	89	45.063	Rhinopithecus_roxellana
ENSELUG00000012193	si:dkey-85a20.4	84	45.302	ENSSBOG00000034503	TARBP1	95	45.316	Saimiri_boliviensis_boliviensis
ENSELUG00000012193	si:dkey-85a20.4	84	44.541	ENSSHAG00000000013	TARBP1	99	44.760	Sarcophilus_harrisii
ENSELUG00000012193	si:dkey-85a20.4	99	57.116	ENSSFOG00015002660	si:dkey-85a20.4	96	63.456	Scleropages_formosus
ENSELUG00000012193	si:dkey-85a20.4	99	60.461	ENSSMAG00000007081	si:dkey-85a20.4	99	61.212	Scophthalmus_maximus
ENSELUG00000012193	si:dkey-85a20.4	99	62.563	ENSSDUG00000023566	si:dkey-85a20.4	99	62.563	Seriola_dumerili
ENSELUG00000012193	si:dkey-85a20.4	99	62.782	ENSSLDG00000020200	si:dkey-85a20.4	99	62.843	Seriola_lalandi_dorsalis
ENSELUG00000012193	si:dkey-85a20.4	76	53.052	ENSSARG00000012207	TARBP1	75	53.052	Sorex_araneus
ENSELUG00000012193	si:dkey-85a20.4	87	42.757	ENSSPUG00000015364	TARBP1	85	45.385	Sphenodon_punctatus
ENSELUG00000012193	si:dkey-85a20.4	99	62.042	ENSSPAG00000007213	si:dkey-85a20.4	99	62.042	Stegastes_partitus
ENSELUG00000012193	si:dkey-85a20.4	86	44.904	ENSSSCG00000010160	TARBP1	99	45.089	Sus_scrofa
ENSELUG00000012193	si:dkey-85a20.4	81	45.365	ENSTGUG00000010214	TARBP1	99	45.064	Taeniopygia_guttata
ENSELUG00000012193	si:dkey-85a20.4	95	56.254	ENSTNIG00000016586	si:dkey-85a20.4	99	61.747	Tetraodon_nigroviridis
ENSELUG00000012193	si:dkey-85a20.4	82	40.504	ENSTTRG00000008707	TARBP1	85	40.727	Tursiops_truncatus
ENSELUG00000012193	si:dkey-85a20.4	82	44.328	ENSUMAG00000006730	TARBP1	97	44.328	Ursus_maritimus
ENSELUG00000012193	si:dkey-85a20.4	61	75.000	ENSVPAG00000007665	TARBP1	69	75.000	Vicugna_pacos
ENSELUG00000012193	si:dkey-85a20.4	85	44.126	ENSVVUG00000007460	TARBP1	98	45.725	Vulpes_vulpes
ENSELUG00000012193	si:dkey-85a20.4	84	42.475	ENSXETG00000016224	tarbp1	99	42.475	Xenopus_tropicalis
ENSELUG00000012193	si:dkey-85a20.4	87	60.486	ENSXCOG00000011779	si:dkey-85a20.4	99	60.614	Xiphophorus_couchianus
ENSELUG00000012193	si:dkey-85a20.4	66	59.006	ENSXMAG00000009600	si:dkey-85a20.4	100	59.287	Xiphophorus_maculatus