EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSELUG00000012346 (Gene tree)
Gene ID
105023060
Gene Symbol
-
Alias
-
Full Name
RNA-binding protein Nova-1
Gene Type
protein_coding
Species
Esox_lucius
Status
putative
Strand
Minus strand
Length
44456 bases
Position
chrLG01:12316979-12361434
Accession
105023060
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSELUP00000012053KH_1PF00013.292.9e-4413
ENSELUP00000012053KH_1PF00013.292.9e-4423
ENSELUP00000012053KH_1PF00013.292.9e-4433
ENSELUP00000033973KH_1PF00013.293.2e-4413
ENSELUP00000033973KH_1PF00013.293.2e-4423
ENSELUP00000033973KH_1PF00013.293.2e-4433
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSELUT00000020247-1572XM_013133707ENSELUP00000033973523 (aa)XP_012989161UPI0006619673
ENSELUT00000037948-1521XM_010891947ENSELUP00000012053506 (aa)XP_010890249-
Gene Model
Click here to download ENSELUG00000012346's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000012346's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSELUG00000012346-5637.500ENSELUG00000004017hnrpkl6937.500
ENSELUG00000012346-8335.821ENSELUG00000019784zgc:1100455037.500
ENSELUG00000012346-5339.706ENSELUG00000003521pcbp39238.596
ENSELUG00000012346-5230.476ENSELUG00000013808fubp36930.476
ENSELUG00000012346-10088.933ENSELUG00000017375nova110088.933
ENSELUG00000012346-5035.802ENSELUG00000010754PCBP27039.744
ENSELUG00000012346-5140.845ENSELUG00000014427pcbp28840.845
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSELUG00000012346-10076.482ENSG00000139910NOVA110088.991Homo_sapiens
ENSELUG00000012346-9988.446ENSAPOG00000002171nova19989.712Acanthochromis_polyacanthus
ENSELUG00000012346-10093.499ENSAPOG00000006189-10093.499Acanthochromis_polyacanthus
ENSELUG00000012346-10070.943ENSAMEG00000015330NOVA19770.566Ailuropoda_melanoleuca
ENSELUG00000012346-10091.897ENSACIG00000007544-10091.897Amphilophus_citrinellus
ENSELUG00000012346-8971.269ENSACIG00000017818nova19975.501Amphilophus_citrinellus
ENSELUG00000012346-9988.446ENSAOCG00000011292nova19988.515Amphiprion_ocellaris
ENSELUG00000012346-51100.000ENSAOCG00000013373-59100.000Amphiprion_ocellaris
ENSELUG00000012346-9689.528ENSAPEG00000012502nova19989.733Amphiprion_percula
ENSELUG00000012346-9991.633ENSAPEG00000016133-9591.633Amphiprion_percula
ENSELUG00000012346-10091.502ENSATEG00000006500NOVA110091.502Anabas_testudineus
ENSELUG00000012346-8872.912ENSATEG00000017565nova19776.524Anabas_testudineus
ENSELUG00000012346-8873.239ENSAPLG00000008154NOVA110072.770Anas_platyrhynchos
ENSELUG00000012346-8875.803ENSACAG00000000477NOVA110075.375Anolis_carolinensis
ENSELUG00000012346-8878.300ENSANAG00000028004NOVA19978.587Aotus_nancymaae
ENSELUG00000012346-10093.499ENSACLG00000018329-10093.499Astatotilapia_calliptera
ENSELUG00000012346-9987.849ENSACLG00000003002nova19987.329Astatotilapia_calliptera
ENSELUG00000012346-10084.449ENSAMXG00000006702nova110084.646Astyanax_mexicanus
ENSELUG00000012346-10091.502ENSAMXG00000033604nova210091.502Astyanax_mexicanus
ENSELUG00000012346-10076.285ENSBTAG00000002170NOVA110075.889Bos_taurus
ENSELUG00000012346-10076.285ENSCJAG00000039497NOVA110075.889Callithrix_jacchus
ENSELUG00000012346-10072.830ENSCAFG00000029157NOVA110072.453Canis_familiaris
ENSELUG00000012346-5572.254ENSCAFG00020024149-7572.254Canis_lupus_dingo
ENSELUG00000012346-10076.285ENSCHIG00000018944NOVA110075.889Capra_hircus
ENSELUG00000012346-8878.781ENSTSYG00000014033NOVA19973.223Carlito_syrichta
ENSELUG00000012346-8870.213ENSCAPG00000010512NOVA110069.740Cavia_aperea
ENSELUG00000012346-10072.830ENSCPOG00000030872NOVA110072.453Cavia_porcellus
ENSELUG00000012346-10076.285ENSCCAG00000026410NOVA110075.889Cebus_capucinus
ENSELUG00000012346-10076.285ENSCATG00000039944NOVA110075.889Cercocebus_atys
ENSELUG00000012346-8875.584ENSCLAG00000008948NOVA19975.159Chinchilla_lanigera
ENSELUG00000012346-10072.830ENSCSAG00000015814NOVA110072.453Chlorocebus_sabaeus
ENSELUG00000012346-10071.509ENSCHOG00000006617NOVA110071.132Choloepus_hoffmanni
ENSELUG00000012346-10076.285ENSCPBG00000027677NOVA110075.889Chrysemys_picta_bellii
ENSELUG00000012346-10076.285ENSCANG00000023898NOVA110075.889Colobus_angolensis_palliatus
ENSELUG00000012346-10072.830ENSCGRG00001024030Nova110072.453Cricetulus_griseus_chok1gshd
ENSELUG00000012346-8876.017ENSCGRG00000004816Nova19875.532Cricetulus_griseus_crigri
ENSELUG00000012346-9985.770ENSCSEG00000017718nova19985.965Cynoglossus_semilaevis
ENSELUG00000012346-10092.734ENSCSEG00000005887NOVA110092.734Cynoglossus_semilaevis
ENSELUG00000012346-9887.625ENSCVAG00000011460nova19986.434Cyprinodon_variegatus
ENSELUG00000012346-8391.667ENSCVAG00000014025NOVA19791.667Cyprinodon_variegatus
ENSELUG00000012346-9581.120ENSCVAG00000014373-10078.631Cyprinodon_variegatus
ENSELUG00000012346-10092.095ENSDARG00000017673nova210092.095Danio_rerio
ENSELUG00000012346-10086.588ENSDARG00000020178nova110097.403Danio_rerio
ENSELUG00000012346-8873.634ENSDNOG00000034618NOVA110073.159Dasypus_novemcinctus
ENSELUG00000012346-10072.830ENSDORG00000012633Nova110072.453Dipodomys_ordii
ENSELUG00000012346-8868.670ENSETEG00000002159NOVA110068.017Echinops_telfairi
ENSELUG00000012346-9461.270ENSEBUG00000016201NOVA19959.653Eptatretus_burgeri
ENSELUG00000012346-9663.581ENSEBUG00000008930NOVA19866.083Eptatretus_burgeri
ENSELUG00000012346-8872.519ENSEASG00005018649NOVA110072.010Equus_asinus_asinus
ENSELUG00000012346-10076.285ENSECAG00000037301NOVA110075.889Equus_caballus
ENSELUG00000012346-10074.317ENSEEUG00000013658NOVA18873.770Erinaceus_europaeus
ENSELUG00000012346-10076.285ENSFCAG00000004226NOVA110075.889Felis_catus
ENSELUG00000012346-10072.830ENSFALG00000005703NOVA110072.453Ficedula_albicollis
ENSELUG00000012346-10071.887ENSFDAG00000007704NOVA110071.509Fukomys_damarensis
ENSELUG00000012346-9887.625ENSFHEG00000004626nova19788.843Fundulus_heteroclitus
ENSELUG00000012346-10092.734ENSFHEG00000020456-10092.734Fundulus_heteroclitus
ENSELUG00000012346-10088.386ENSGMOG00000011253nova110088.583Gadus_morhua
ENSELUG00000012346-7494.239ENSGMOG00000019162-7794.239Gadus_morhua
ENSELUG00000012346-10076.285ENSGALG00000009850NOVA110075.889Gallus_gallus
ENSELUG00000012346-9887.450ENSGAFG00000016382nova19788.957Gambusia_affinis
ENSELUG00000012346-8886.410ENSGAFG00000003656-10086.410Gambusia_affinis
ENSELUG00000012346-9488.309ENSGACG00000012628-9988.309Gasterosteus_aculeatus
ENSELUG00000012346-9988.623ENSGACG00000020175nova110088.258Gasterosteus_aculeatus
ENSELUG00000012346-8375.367ENSGAGG00000007839NOVA19576.540Gopherus_agassizii
ENSELUG00000012346-10076.285ENSGGOG00000016495NOVA110075.889Gorilla_gorilla
ENSELUG00000012346-9987.873ENSHBUG00000018561nova19988.889Haplochromis_burtoni
ENSELUG00000012346-10093.499ENSHBUG00000002485NOVA110093.499Haplochromis_burtoni
ENSELUG00000012346-10076.285ENSHGLG00000003180NOVA110075.889Heterocephalus_glaber_female
ENSELUG00000012346-8873.697ENSHGLG00100000791NOVA19073.223Heterocephalus_glaber_male
ENSELUG00000012346-10086.990ENSHCOG00000008366nova110087.184Hippocampus_comes
ENSELUG00000012346-10092.543ENSHCOG00000019136-10092.543Hippocampus_comes
ENSELUG00000012346-9991.071ENSIPUG00000019551nova210088.593Ictalurus_punctatus
ENSELUG00000012346-10084.393ENSIPUG00000018651nova110084.393Ictalurus_punctatus
ENSELUG00000012346-8875.584ENSSTOG00000020788NOVA19975.159Ictidomys_tridecemlineatus
ENSELUG00000012346-10072.830ENSJJAG00000012915Nova110072.453Jaculus_jaculus
ENSELUG00000012346-5297.753ENSKMAG00000015047-9597.753Kryptolebias_marmoratus
ENSELUG00000012346-10086.248ENSKMAG00000014225nova19986.444Kryptolebias_marmoratus
ENSELUG00000012346-5085.246ENSKMAG00000006068-8385.246Kryptolebias_marmoratus
ENSELUG00000012346-10092.734ENSLBEG00000003511NOVA110092.734Labrus_bergylta
ENSELUG00000012346-9988.235ENSLBEG00000028542nova110088.431Labrus_bergylta
ENSELUG00000012346-8873.882ENSLACG00000005669NOVA19974.353Latimeria_chalumnae
ENSELUG00000012346-10086.166ENSLACG00000015223nova29986.166Latimeria_chalumnae
ENSELUG00000012346-10068.302ENSLOCG00000009727NOVA110072.613Lepisosteus_oculatus
ENSELUG00000012346-10091.897ENSLOCG00000014804nova29991.897Lepisosteus_oculatus
ENSELUG00000012346-10072.830ENSLAFG00000006455NOVA110077.436Loxodonta_africana
ENSELUG00000012346-10076.285ENSMFAG00000035425NOVA110075.889Macaca_fascicularis
ENSELUG00000012346-10072.830ENSMMUG00000004271NOVA110072.453Macaca_mulatta
ENSELUG00000012346-10076.285ENSMNEG00000040302NOVA110075.889Macaca_nemestrina
ENSELUG00000012346-8878.781ENSMLEG00000034714NOVA110079.551Mandrillus_leucophaeus
ENSELUG00000012346-10093.117ENSMAMG00000016281NOVA110093.117Mastacembelus_armatus
ENSELUG00000012346-9888.400ENSMAMG00000021272nova19987.867Mastacembelus_armatus
ENSELUG00000012346-10093.499ENSMZEG00005024407-10093.499Maylandia_zebra
ENSELUG00000012346-9987.849ENSMZEG00005023362nova19987.329Maylandia_zebra
ENSELUG00000012346-8873.412ENSMGAG00000012359NOVA110072.941Meleagris_gallopavo
ENSELUG00000012346-10076.285ENSMICG00000034677NOVA110075.889Microcebus_murinus
ENSELUG00000012346-10072.830ENSMOCG00000006277Nova110072.453Microtus_ochrogaster
ENSELUG00000012346-9890.303ENSMMOG00000005092-9690.303Mola_mola
ENSELUG00000012346-9982.804ENSMMOG00000006066nova110082.991Mola_mola
ENSELUG00000012346-8876.017ENSMODG00000001830NOVA19575.532Monodelphis_domestica
ENSELUG00000012346-9985.089ENSMALG00000005081nova19284.891Monopterus_albus
ENSELUG00000012346-5289.610ENSMALG00000010432-6798.485Monopterus_albus
ENSELUG00000012346-10072.642MGP_CAROLIEiJ_G0017728Nova110072.264Mus_caroli
ENSELUG00000012346-10072.642ENSMUSG00000021047Nova110072.264Mus_musculus
ENSELUG00000012346-10072.642MGP_PahariEiJ_G0029485Nova110072.264Mus_pahari
ENSELUG00000012346-10072.642MGP_SPRETEiJ_G0018570Nova110072.264Mus_spretus
ENSELUG00000012346-10072.830ENSMPUG00000005462NOVA110072.453Mustela_putorius_furo
ENSELUG00000012346-8873.176ENSMLUG00000016716NOVA110072.706Myotis_lucifugus
ENSELUG00000012346-8874.304ENSNGAG00000023231Nova110075.053Nannospalax_galili
ENSELUG00000012346-6190.303ENSNBRG00000016812-8590.303Neolamprologus_brichardi
ENSELUG00000012346-9987.450ENSNBRG00000008100nova19986.940Neolamprologus_brichardi
ENSELUG00000012346-10076.285ENSNLEG00000033958NOVA110075.889Nomascus_leucogenys
ENSELUG00000012346-8873.159ENSMEUG00000009112NOVA18272.684Notamacropus_eugenii
ENSELUG00000012346-7872.222ENSOPRG00000007199-6573.543Ochotona_princeps
ENSELUG00000012346-8876.017ENSODEG00000001059NOVA110075.480Octodon_degus
ENSELUG00000012346-10093.499ENSONIG00000007665NOVA110093.499Oreochromis_niloticus
ENSELUG00000012346-9684.570ENSONIG00000015810nova110083.685Oreochromis_niloticus
ENSELUG00000012346-8471.200ENSOANG00000014015NOVA110070.667Ornithorhynchus_anatinus
ENSELUG00000012346-10072.830ENSOCUG00000017622NOVA110072.453Oryctolagus_cuniculus
ENSELUG00000012346-9986.733ENSORLG00000000350nova19886.931Oryzias_latipes
ENSELUG00000012346-10092.543ENSORLG00000027761-10092.543Oryzias_latipes
ENSELUG00000012346-10092.543ENSORLG00020019124-10092.543Oryzias_latipes_hni
ENSELUG00000012346-9987.129ENSORLG00020004573nova19888.139Oryzias_latipes_hni
ENSELUG00000012346-9986.931ENSORLG00015000650nova19988.296Oryzias_latipes_hsok
ENSELUG00000012346-10092.543ENSORLG00015007890-10092.543Oryzias_latipes_hsok
ENSELUG00000012346-10092.352ENSOMEG00000022949-10092.352Oryzias_melastigma
ENSELUG00000012346-9986.535ENSOMEG00000015479nova19788.477Oryzias_melastigma
ENSELUG00000012346-9972.779ENSOGAG00000025938NOVA110072.401Otolemur_garnettii
ENSELUG00000012346-8876.017ENSOARG00000004870NOVA19875.532Ovis_aries
ENSELUG00000012346-8977.704ENSPPAG00000038980NOVA19979.065Pan_paniscus
ENSELUG00000012346-10076.285ENSPPRG00000015429NOVA110075.889Panthera_pardus
ENSELUG00000012346-8878.781ENSPTIG00000009518NOVA19079.684Panthera_tigris_altaica
ENSELUG00000012346-10076.285ENSPTRG00000006229NOVA110075.889Pan_troglodytes
ENSELUG00000012346-10076.285ENSPANG00000004891NOVA110075.889Papio_anubis
ENSELUG00000012346-10093.083ENSPKIG00000005431nova29993.083Paramormyrops_kingsleyae
ENSELUG00000012346-10076.482ENSPKIG00000001428NOVA110076.877Paramormyrops_kingsleyae
ENSELUG00000012346-8875.584ENSPSIG00000007132NOVA19975.372Pelodiscus_sinensis
ENSELUG00000012346-9988.166ENSPMGG00000005975nova19988.363Periophthalmus_magnuspinnatus
ENSELUG00000012346-10091.304ENSPMGG00000009801-10091.304Periophthalmus_magnuspinnatus
ENSELUG00000012346-10072.830ENSPEMG00000006503Nova110072.453Peromyscus_maniculatus_bairdii
ENSELUG00000012346-8872.519ENSPCIG00000024683NOVA110072.010Phascolarctos_cinereus
ENSELUG00000012346-10092.352ENSPFOG00000016392-10092.352Poecilia_formosa
ENSELUG00000012346-8892.325ENSPFOG00000018009nova19992.601Poecilia_formosa
ENSELUG00000012346-10087.666ENSPLAG00000003504-10087.666Poecilia_latipinna
ENSELUG00000012346-9986.957ENSPLAG00000015391nova19987.154Poecilia_latipinna
ENSELUG00000012346-9887.500ENSPMEG00000016376nova19987.702Poecilia_mexicana
ENSELUG00000012346-10092.352ENSPMEG00000019140-10092.352Poecilia_mexicana
ENSELUG00000012346-10087.476ENSPREG00000018946-10087.476Poecilia_reticulata
ENSELUG00000012346-9987.129ENSPREG00000011614nova19987.327Poecilia_reticulata
ENSELUG00000012346-10072.830ENSPPYG00000005714NOVA110072.453Pongo_abelii
ENSELUG00000012346-9871.429ENSPCAG00000010303NOVA18770.690Procavia_capensis
ENSELUG00000012346-10068.701ENSPCOG00000016857NOVA110072.706Propithecus_coquereli
ENSELUG00000012346-10072.264ENSPVAG00000002564NOVA110071.887Pteropus_vampyrus
ENSELUG00000012346-10093.499ENSPNYG00000022283-10093.499Pundamilia_nyererei
ENSELUG00000012346-9688.889ENSPNYG00000015521nova19189.095Pundamilia_nyererei
ENSELUG00000012346-10091.107ENSPNAG00000009171nova210091.107Pygocentrus_nattereri
ENSELUG00000012346-10084.902ENSPNAG00000024351nova19790.157Pygocentrus_nattereri
ENSELUG00000012346-9976.040ENSRNOG00000031440Nova110075.644Rattus_norvegicus
ENSELUG00000012346-8977.704ENSRBIG00000026331NOVA19979.065Rhinopithecus_bieti
ENSELUG00000012346-8878.781ENSRROG00000040203NOVA110079.551Rhinopithecus_roxellana
ENSELUG00000012346-9478.661ENSSBOG00000034029NOVA110078.243Saimiri_boliviensis_boliviensis
ENSELUG00000012346-8873.412ENSSHAG00000004907NOVA110072.941Sarcophilus_harrisii
ENSELUG00000012346-5171.098ENSSFOG00015010887NOVA16871.098Scleropages_formosus
ENSELUG00000012346-10085.573ENSSFOG00015004204nova210085.968Scleropages_formosus
ENSELUG00000012346-5793.827ENSSFOG00015010909-7993.827Scleropages_formosus
ENSELUG00000012346-10087.867ENSSMAG00000006485nova17288.063Scophthalmus_maximus
ENSELUG00000012346-10093.308ENSSMAG00000020189-10093.308Scophthalmus_maximus
ENSELUG00000012346-9589.256ENSSDUG00000020704nova19989.463Seriola_dumerili
ENSELUG00000012346-10092.095ENSSDUG00000001795-10092.095Seriola_dumerili
ENSELUG00000012346-10088.063ENSSLDG00000006713nova19889.897Seriola_lalandi_dorsalis
ENSELUG00000012346-10093.308ENSSLDG00000003193-10093.308Seriola_lalandi_dorsalis
ENSELUG00000012346-8876.017ENSSARG00000002599NOVA110075.480Sorex_araneus
ENSELUG00000012346-8872.519ENSSPUG00000006539NOVA110072.010Sphenodon_punctatus
ENSELUG00000012346-9988.446ENSSPAG00000001033nova19988.086Stegastes_partitus
ENSELUG00000012346-10093.499ENSSPAG00000008284NOVA110093.499Stegastes_partitus
ENSELUG00000012346-10076.285ENSSSCG00000024396NOVA110075.889Sus_scrofa
ENSELUG00000012346-10072.830ENSTGUG00000011799NOVA110072.453Taeniopygia_guttata
ENSELUG00000012346-10093.308ENSTRUG00000016275-10093.308Takifugu_rubripes
ENSELUG00000012346-9588.199ENSTNIG00000011634nova110088.406Tetraodon_nigroviridis
ENSELUG00000012346-8492.128ENSTNIG00000018993NOVA19992.128Tetraodon_nigroviridis
ENSELUG00000012346-10073.245ENSTBEG00000009774NOVA110072.865Tupaia_belangeri
ENSELUG00000012346-8866.595ENSTTRG00000006010NOVA110066.311Tursiops_truncatus
ENSELUG00000012346-10076.285ENSUAMG00000025822NOVA110075.889Ursus_americanus
ENSELUG00000012346-8872.519ENSUMAG00000023125NOVA110072.010Ursus_maritimus
ENSELUG00000012346-10072.830ENSVPAG00000007807NOVA110072.453Vicugna_pacos
ENSELUG00000012346-8977.704ENSVVUG00000029367NOVA19978.587Vulpes_vulpes
ENSELUG00000012346-10072.830ENSXETG00000010244nova110073.208Xenopus_tropicalis
ENSELUG00000012346-10091.304ENSXCOG00000009738NOVA110091.304Xiphophorus_couchianus
ENSELUG00000012346-10091.969ENSXMAG00000013130-10091.969Xiphophorus_maculatus
ENSELUG00000012346-9986.888ENSXMAG00000017880nova19986.888Xiphophorus_maculatus

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