EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000012387 (Gene tree)
Gene ID: 105023061
Gene Symbol: cd3eap
Alias: cd3ap
Full Name: DNA-directed RNA polymerase I subunit RPA34
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 3461 bases
Position: chrLG01:12293223-12296683
Accession: 105023061
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000012090	RNA_polI_A34	PF08208.11	1.7e-31	1	1
ENSELUP00000033963	RNA_polI_A34	PF08208.11	4.1e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000020299	-	2347	XM_010891949	ENSELUP00000012090	317 (aa)	XP_010890251	UPI0005771441
ENSELUT00000037944	-	849	-	ENSELUP00000033963	282 (aa)	-	-

Gene Model

Click here to download ENSELUG00000012387's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000012387's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000012387	cd3eap	58	51.579	ENSAPOG00000001121	cd3eap	83	44.828	Acanthochromis_polyacanthus
ENSELUG00000012387	cd3eap	82	43.929	ENSACIG00000007610	-	85	46.964	Amphilophus_citrinellus
ENSELUG00000012387	cd3eap	55	52.809	ENSAOCG00000007088	cd3eap	84	43.082	Amphiprion_ocellaris
ENSELUG00000012387	cd3eap	55	52.247	ENSAPEG00000016153	cd3eap	84	40.952	Amphiprion_percula
ENSELUG00000012387	cd3eap	58	48.148	ENSATEG00000006485	cd3eap	92	45.732	Anabas_testudineus
ENSELUG00000012387	cd3eap	57	50.802	ENSACLG00000018258	cd3eap	85	48.496	Astatotilapia_calliptera
ENSELUG00000012387	cd3eap	95	41.613	ENSAMXG00000043778	cd3eap	95	41.613	Astyanax_mexicanus
ENSELUG00000012387	cd3eap	58	47.283	ENSCSEG00000005914	cd3eap	50	41.885	Cynoglossus_semilaevis
ENSELUG00000012387	cd3eap	54	53.529	ENSCVAG00000000356	cd3eap	93	39.275	Cyprinodon_variegatus
ENSELUG00000012387	cd3eap	54	39.766	ENSDARG00000090386	cd3eap	55	40.936	Danio_rerio
ENSELUG00000012387	cd3eap	55	52.601	ENSFHEG00000020394	-	89	43.234	Fundulus_heteroclitus
ENSELUG00000012387	cd3eap	58	45.946	ENSGAFG00000003667	cd3eap	92	38.629	Gambusia_affinis
ENSELUG00000012387	cd3eap	55	50.847	ENSGACG00000012623	cd3eap	73	51.412	Gasterosteus_aculeatus
ENSELUG00000012387	cd3eap	57	50.802	ENSHBUG00000001063	cd3eap	85	48.496	Haplochromis_burtoni
ENSELUG00000012387	cd3eap	56	43.503	ENSHCOG00000019142	-	66	42.328	Hippocampus_comes
ENSELUG00000012387	cd3eap	51	44.720	ENSIPUG00000019546	cd3eap	51	44.720	Ictalurus_punctatus
ENSELUG00000012387	cd3eap	99	43.155	ENSKMAG00000015084	cd3eap	97	42.899	Kryptolebias_marmoratus
ENSELUG00000012387	cd3eap	53	52.071	ENSLBEG00000008226	cd3eap	91	44.262	Labrus_bergylta
ENSELUG00000012387	cd3eap	51	38.037	ENSLACG00000013798	-	50	36.313	Latimeria_chalumnae
ENSELUG00000012387	cd3eap	90	38.028	ENSLOCG00000014803	cd3eap	84	37.676	Lepisosteus_oculatus
ENSELUG00000012387	cd3eap	50	51.875	ENSMAMG00000016319	cd3eap	94	44.654	Mastacembelus_armatus
ENSELUG00000012387	cd3eap	71	48.193	ENSMZEG00005024408	cd3eap	86	47.297	Maylandia_zebra
ENSELUG00000012387	cd3eap	81	42.754	ENSMALG00000010452	cd3eap	92	41.693	Monopterus_albus
ENSELUG00000012387	cd3eap	51	53.374	ENSNBRG00000016766	cd3eap	85	47.297	Neolamprologus_brichardi
ENSELUG00000012387	cd3eap	56	47.458	ENSORLG00000001427	-	66	44.444	Oryzias_latipes
ENSELUG00000012387	cd3eap	63	44.724	ENSORLG00020019155	-	65	44.949	Oryzias_latipes_hni
ENSELUG00000012387	cd3eap	58	48.087	ENSOMEG00000022922	cd3eap	56	48.387	Oryzias_melastigma
ENSELUG00000012387	cd3eap	58	32.258	ENSPCIG00000022939	-	50	32.716	Phascolarctos_cinereus
ENSELUG00000012387	cd3eap	58	46.486	ENSPFOG00000016410	cd3eap	70	46.524	Poecilia_formosa
ENSELUG00000012387	cd3eap	58	45.946	ENSPLAG00000023890	cd3eap	92	40.683	Poecilia_latipinna
ENSELUG00000012387	cd3eap	58	46.486	ENSPMEG00000019111	cd3eap	92	41.486	Poecilia_mexicana
ENSELUG00000012387	cd3eap	54	49.123	ENSPREG00000018959	-	88	39.414	Poecilia_reticulata
ENSELUG00000012387	cd3eap	57	50.802	ENSPNYG00000022270	cd3eap	85	48.496	Pundamilia_nyererei
ENSELUG00000012387	cd3eap	56	48.045	ENSPNAG00000005779	cd3eap	95	36.393	Pygocentrus_nattereri
ENSELUG00000012387	cd3eap	51	45.342	ENSSFOG00015004233	cd3eap	63	45.556	Scleropages_formosus
ENSELUG00000012387	cd3eap	59	44.920	ENSSMAG00000020182	cd3eap	92	41.270	Scophthalmus_maximus
ENSELUG00000012387	cd3eap	90	45.000	ENSSDUG00000001874	cd3eap	92	43.849	Seriola_dumerili
ENSELUG00000012387	cd3eap	90	45.333	ENSSLDG00000003180	cd3eap	92	44.164	Seriola_lalandi_dorsalis
ENSELUG00000012387	cd3eap	52	52.410	ENSSPAG00000014760	-	93	44.164	Stegastes_partitus
ENSELUG00000012387	cd3eap	50	50.633	ENSXCOG00000009736	cd3eap	96	40.000	Xiphophorus_couchianus
ENSELUG00000012387	cd3eap	58	47.027	ENSXMAG00000013127	cd3eap	53	47.059	Xiphophorus_maculatus