EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000012537 (Gene tree)
Gene ID: 105022709
Gene Symbol: lyn
Alias: zgc:92124
Full Name: trimethylguanosine synthase 1
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 16107 bases
Position: chrLG03:22838066-22854172
Accession: 105022709
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000012270	Methyltransf_15	PF09445.10	5.7e-43	1	1
ENSELUP00000012276	Methyltransf_15	PF09445.10	5.9e-43	1	1
ENSELUP00000012270	UPF0020	PF01170.18	1.1e-05	1	1
ENSELUP00000012276	UPF0020	PF01170.18	1.1e-05	1	1
ENSELUP00000012270	Met_10	PF02475.16	1.8e-06	1	1
ENSELUP00000012276	Met_10	PF02475.16	1.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000020514	-	5416	XM_010891370	ENSELUP00000012270	820 (aa)	XP_010889672	UPI0005769E5D
ENSELUT00000038025	-	4999	-	ENSELUP00000012276	834 (aa)	-	-

Gene Model

Click here to download ENSELUG00000012537's gene model file

Pathways

Pathway ID	Pathway Name	Source
els03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000012537's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000012537	lyn	99	39.091	ENSG00000137574	TGS1	99	38.322	Homo_sapiens
ENSELUG00000012537	lyn	68	46.246	ENSAPOG00000004321	-	99	45.470	Acanthochromis_polyacanthus
ENSELUG00000012537	lyn	83	75.814	ENSAMEG00000001781	TGS1	86	75.814	Ailuropoda_melanoleuca
ENSELUG00000012537	lyn	99	47.313	ENSAOCG00000022799	lyn	99	46.612	Amphiprion_ocellaris
ENSELUG00000012537	lyn	79	49.635	ENSAPEG00000019723	TGS1	96	49.343	Amphiprion_percula
ENSELUG00000012537	lyn	93	43.860	ENSATEG00000005927	lyn	92	44.819	Anabas_testudineus
ENSELUG00000012537	lyn	77	40.849	ENSAPLG00000006073	-	97	40.849	Anas_platyrhynchos
ENSELUG00000012537	lyn	97	37.118	ENSACAG00000017988	TGS1	89	38.293	Anolis_carolinensis
ENSELUG00000012537	lyn	99	45.933	ENSACLG00000000261	lyn	100	45.823	Astatotilapia_calliptera
ENSELUG00000012537	lyn	99	49.106	ENSAMXG00000014086	lyn	99	49.400	Astyanax_mexicanus
ENSELUG00000012537	lyn	83	73.832	ENSBTAG00000005898	TGS1	86	73.832	Bos_taurus
ENSELUG00000012537	lyn	99	39.817	ENSCAFG00000007011	TGS1	51	30.023	Canis_familiaris
ENSELUG00000012537	lyn	99	38.946	ENSCAFG00020015485	TGS1	99	39.061	Canis_lupus_dingo
ENSELUG00000012537	lyn	99	38.826	ENSCHIG00000013976	TGS1	99	39.703	Capra_hircus
ENSELUG00000012537	lyn	99	38.958	ENSTSYG00000000171	TGS1	99	38.883	Carlito_syrichta
ENSELUG00000012537	lyn	90	40.102	ENSCAPG00000013732	TGS1	93	39.719	Cavia_aperea
ENSELUG00000012537	lyn	99	39.840	ENSCPOG00000009713	TGS1	98	40.868	Cavia_porcellus
ENSELUG00000012537	lyn	99	38.895	ENSCCAG00000030476	TGS1	85	75.701	Cebus_capucinus
ENSELUG00000012537	lyn	92	35.585	ENSCSAG00000014611	TGS1	99	34.561	Chlorocebus_sabaeus
ENSELUG00000012537	lyn	99	37.400	ENSCHOG00000001462	TGS1	99	36.986	Choloepus_hoffmanni
ENSELUG00000012537	lyn	97	37.755	ENSCPBG00000004958	TGS1	97	37.528	Chrysemys_picta_bellii
ENSELUG00000012537	lyn	99	39.391	ENSCANG00000041389	TGS1	99	38.710	Colobus_angolensis_palliatus
ENSELUG00000012537	lyn	99	37.095	ENSCGRG00000008981	Tgs1	99	36.979	Cricetulus_griseus_crigri
ENSELUG00000012537	lyn	99	50.642	ENSDARG00000107511	lyn	99	86.111	Danio_rerio
ENSELUG00000012537	lyn	99	39.016	ENSDNOG00000008353	TGS1	99	39.135	Dasypus_novemcinctus
ENSELUG00000012537	lyn	99	41.231	ENSDORG00000012484	Tgs1	99	41.259	Dipodomys_ordii
ENSELUG00000012537	lyn	50	44.608	ENSETEG00000005126	TGS1	71	36.409	Echinops_telfairi
ENSELUG00000012537	lyn	92	35.775	ENSEASG00005016371	TGS1	95	35.442	Equus_asinus_asinus
ENSELUG00000012537	lyn	99	39.359	ENSECAG00000019399	TGS1	99	38.764	Equus_caballus
ENSELUG00000012537	lyn	65	81.818	ENSEEUG00000001735	TGS1	69	81.818	Erinaceus_europaeus
ENSELUG00000012537	lyn	99	39.175	ENSFCAG00000011478	TGS1	99	37.472	Felis_catus
ENSELUG00000012537	lyn	89	41.358	ENSFALG00000010249	TGS1	99	41.147	Ficedula_albicollis
ENSELUG00000012537	lyn	99	40.289	ENSGALG00000015340	TGS1	99	40.045	Gallus_gallus
ENSELUG00000012537	lyn	97	37.896	ENSGAGG00000019590	TGS1	97	38.209	Gopherus_agassizii
ENSELUG00000012537	lyn	99	39.185	ENSGGOG00000008624	TGS1	99	39.116	Gorilla_gorilla
ENSELUG00000012537	lyn	71	44.942	ENSHBUG00000003518	lyn	99	44.942	Haplochromis_burtoni
ENSELUG00000012537	lyn	68	84.375	ENSHGLG00000000284	TGS1	85	84.375	Heterocephalus_glaber_female
ENSELUG00000012537	lyn	99	46.298	ENSHCOG00000014161	lyn	99	45.711	Hippocampus_comes
ENSELUG00000012537	lyn	80	51.245	ENSIPUG00000002294	tgs1	99	46.925	Ictalurus_punctatus
ENSELUG00000012537	lyn	99	39.519	ENSSTOG00000009597	TGS1	99	39.863	Ictidomys_tridecemlineatus
ENSELUG00000012537	lyn	99	38.657	ENSJJAG00000016239	Tgs1	99	38.090	Jaculus_jaculus
ENSELUG00000012537	lyn	99	48.619	ENSLBEG00000027341	-	99	48.804	Labrus_bergylta
ENSELUG00000012537	lyn	99	39.374	ENSLACG00000008074	TGS1	99	39.038	Latimeria_chalumnae
ENSELUG00000012537	lyn	90	73.684	ENSLOCG00000005492	lyn	97	46.528	Lepisosteus_oculatus
ENSELUG00000012537	lyn	99	39.274	ENSMFAG00000029838	TGS1	99	38.409	Macaca_fascicularis
ENSELUG00000012537	lyn	99	38.462	ENSMMUG00000005478	TGS1	99	37.273	Macaca_mulatta
ENSELUG00000012537	lyn	99	39.160	ENSMNEG00000023719	TGS1	99	37.955	Macaca_nemestrina
ENSELUG00000012537	lyn	99	39.751	ENSMLEG00000034807	TGS1	99	37.962	Mandrillus_leucophaeus
ENSELUG00000012537	lyn	99	46.288	ENSMAMG00000009542	TGS1	99	45.741	Mastacembelus_armatus
ENSELUG00000012537	lyn	99	46.053	ENSMZEG00005015681	lyn	100	45.943	Maylandia_zebra
ENSELUG00000012537	lyn	79	43.040	ENSMGAG00000010966	TGS1	88	42.938	Meleagris_gallopavo
ENSELUG00000012537	lyn	99	39.092	ENSMICG00000011199	TGS1	99	38.206	Microcebus_murinus
ENSELUG00000012537	lyn	99	39.770	ENSMOCG00000019560	Tgs1	99	39.446	Microtus_ochrogaster
ENSELUG00000012537	lyn	73	75.664	ENSMMOG00000021495	lyn	92	77.273	Mola_mola
ENSELUG00000012537	lyn	79	42.981	ENSMODG00000009174	TGS1	97	39.691	Monodelphis_domestica
ENSELUG00000012537	lyn	89	45.855	ENSMALG00000021440	lyn	99	46.452	Monopterus_albus
ENSELUG00000012537	lyn	54	65.888	MGP_CAROLIEiJ_G0025780	-	55	65.888	Mus_caroli
ENSELUG00000012537	lyn	99	35.017	MGP_PahariEiJ_G0023902	-	55	65.888	Mus_pahari
ENSELUG00000012537	lyn	99	38.106	MGP_PahariEiJ_G0023901	-	98	38.310	Mus_pahari
ENSELUG00000012537	lyn	92	36.286	ENSMPUG00000010475	TGS1	99	35.518	Mustela_putorius_furo
ENSELUG00000012537	lyn	99	39.932	ENSMLUG00000014857	TGS1	99	39.681	Myotis_lucifugus
ENSELUG00000012537	lyn	99	40.023	ENSNGAG00000019532	Tgs1	99	39.909	Nannospalax_galili
ENSELUG00000012537	lyn	99	38.845	ENSNLEG00000001101	TGS1	99	38.401	Nomascus_leucogenys
ENSELUG00000012537	lyn	90	39.169	ENSMEUG00000001697	TGS1	96	39.245	Notamacropus_eugenii
ENSELUG00000012537	lyn	89	42.526	ENSONIG00000006339	lyn	99	43.208	Oreochromis_niloticus
ENSELUG00000012537	lyn	79	43.723	ENSOANG00000021853	TGS1	98	39.748	Ornithorhynchus_anatinus
ENSELUG00000012537	lyn	99	43.401	ENSORLG00000004299	lyn	96	44.391	Oryzias_latipes
ENSELUG00000012537	lyn	60	31.499	ENSORLG00020004200	lyn	96	42.807	Oryzias_latipes_hni
ENSELUG00000012537	lyn	99	43.757	ENSOMEG00000020174	lyn	99	44.405	Oryzias_melastigma
ENSELUG00000012537	lyn	99	38.079	ENSOARG00000014613	TGS1	99	38.598	Ovis_aries
ENSELUG00000012537	lyn	99	39.027	ENSPPAG00000039058	TGS1	99	39.205	Pan_paniscus
ENSELUG00000012537	lyn	99	39.456	ENSPPRG00000000677	TGS1	51	30.110	Panthera_pardus
ENSELUG00000012537	lyn	99	39.569	ENSPTIG00000005122	TGS1	51	30.330	Panthera_tigris_altaica
ENSELUG00000012537	lyn	99	39.459	ENSPANG00000018910	TGS1	99	38.186	Papio_anubis
ENSELUG00000012537	lyn	91	49.392	ENSPKIG00000005454	lyn	78	50.453	Paramormyrops_kingsleyae
ENSELUG00000012537	lyn	96	39.909	ENSPSIG00000014983	TGS1	99	39.333	Pelodiscus_sinensis
ENSELUG00000012537	lyn	77	74.459	ENSPMGG00000012711	lyn	88	78.440	Periophthalmus_magnuspinnatus
ENSELUG00000012537	lyn	99	40.162	ENSPEMG00000007957	Tgs1	99	39.699	Peromyscus_maniculatus_bairdii
ENSELUG00000012537	lyn	79	45.455	ENSPFOG00000001545	-	82	79.167	Poecilia_formosa
ENSELUG00000012537	lyn	76	79.870	ENSPREG00000012261	-	85	79.487	Poecilia_reticulata
ENSELUG00000012537	lyn	99	40.159	ENSPPYG00000018597	TGS1	76	76.636	Pongo_abelii
ENSELUG00000012537	lyn	99	38.889	ENSPCAG00000000143	TGS1	99	37.780	Procavia_capensis
ENSELUG00000012537	lyn	99	39.140	ENSPCOG00000013537	TGS1	99	38.771	Propithecus_coquereli
ENSELUG00000012537	lyn	83	75.000	ENSPVAG00000016399	TGS1	86	76.168	Pteropus_vampyrus
ENSELUG00000012537	lyn	97	45.746	ENSPNYG00000023004	lyn	94	46.002	Pundamilia_nyererei
ENSELUG00000012537	lyn	99	50.179	ENSPNAG00000022249	lyn	99	49.880	Pygocentrus_nattereri
ENSELUG00000012537	lyn	99	39.080	ENSRNOG00000008156	Tgs1	98	38.293	Rattus_norvegicus
ENSELUG00000012537	lyn	99	37.037	ENSRBIG00000041893	TGS1	99	37.062	Rhinopithecus_bieti
ENSELUG00000012537	lyn	99	39.843	ENSSHAG00000012878	TGS1	98	39.363	Sarcophilus_harrisii
ENSELUG00000012537	lyn	96	46.253	ENSSFOG00015001308	tgs1	96	46.495	Scleropages_formosus
ENSELUG00000012537	lyn	99	46.651	ENSSMAG00000019469	lyn	99	46.597	Scophthalmus_maximus
ENSELUG00000012537	lyn	96	43.314	ENSSPAG00000002170	lyn	97	44.619	Stegastes_partitus
ENSELUG00000012537	lyn	89	36.262	ENSSSCG00000006251	TGS1	98	35.480	Sus_scrofa
ENSELUG00000012537	lyn	82	74.884	ENSTGUG00000011050	TGS1	89	74.884	Taeniopygia_guttata
ENSELUG00000012537	lyn	58	67.433	ENSTRUG00000009532	lyn	66	75.000	Takifugu_rubripes
ENSELUG00000012537	lyn	90	43.367	ENSTNIG00000018133	lyn	99	43.312	Tetraodon_nigroviridis
ENSELUG00000012537	lyn	83	80.000	ENSTBEG00000010953	TGS1	84	80.000	Tupaia_belangeri
ENSELUG00000012537	lyn	85	41.160	ENSTTRG00000017239	TGS1	81	39.782	Tursiops_truncatus
ENSELUG00000012537	lyn	83	72.430	ENSUAMG00000027718	TGS1	85	72.430	Ursus_americanus
ENSELUG00000012537	lyn	76	73.548	ENSUMAG00000009761	TGS1	85	73.548	Ursus_maritimus
ENSELUG00000012537	lyn	99	38.165	ENSXETG00000005648	tgs1	99	37.387	Xenopus_tropicalis