EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000012561 (Gene tree)
Gene ID: 105025586
Gene Symbol: rbm19
Alias: nil per os|npo
Full Name: RNA binding motif protein 19
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 15188 bases
Position: chrLG13:17626998-17642185
Accession: 105025586
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000034090	RRM_1	PF00076.22	2.7e-86	1	5
ENSELUP00000034090	RRM_1	PF00076.22	2.7e-86	2	5
ENSELUP00000034090	RRM_1	PF00076.22	2.7e-86	3	5
ENSELUP00000034090	RRM_1	PF00076.22	2.7e-86	4	5
ENSELUP00000034090	RRM_1	PF00076.22	2.7e-86	5	5
ENSELUP00000034108	RRM_1	PF00076.22	1.4e-81	1	5
ENSELUP00000034108	RRM_1	PF00076.22	1.4e-81	2	5
ENSELUP00000034108	RRM_1	PF00076.22	1.4e-81	3	5
ENSELUP00000034108	RRM_1	PF00076.22	1.4e-81	4	5
ENSELUP00000034108	RRM_1	PF00076.22	1.4e-81	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000020569	-	3818	-	ENSELUP00000034108	902 (aa)	-	-
ENSELUT00000020543	-	3968	XM_010896361	ENSELUP00000034090	909 (aa)	XP_010894663	UPI000577B7F0

Gene Model

Click here to download ENSELUG00000012561's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000012561's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000012561	rbm19	58	36.000	ENSELUG00000001811	pabpc1l	65	36.000
ENSELUG00000012561	rbm19	62	36.000	ENSELUG00000003614	pabpc1a	58	36.000
ENSELUG00000012561	rbm19	56	36.000	ENSELUG00000015062	-	58	36.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000012561	rbm19	100	58.539	ENSG00000122965	RBM19	90	74.038	Homo_sapiens
ENSELUG00000012561	rbm19	100	72.270	ENSAPOG00000010507	rbm19	100	72.776	Acanthochromis_polyacanthus
ENSELUG00000012561	rbm19	99	56.804	ENSAMEG00000008544	RBM19	99	56.571	Ailuropoda_melanoleuca
ENSELUG00000012561	rbm19	98	73.533	ENSACIG00000017780	rbm19	99	73.673	Amphilophus_citrinellus
ENSELUG00000012561	rbm19	100	72.318	ENSAOCG00000008554	rbm19	100	72.698	Amphiprion_ocellaris
ENSELUG00000012561	rbm19	97	71.978	ENSAPEG00000022381	rbm19	96	72.958	Amphiprion_percula
ENSELUG00000012561	rbm19	99	71.692	ENSATEG00000007000	rbm19	100	71.598	Anabas_testudineus
ENSELUG00000012561	rbm19	94	55.788	ENSAPLG00000015319	RBM19	99	55.104	Anas_platyrhynchos
ENSELUG00000012561	rbm19	99	57.520	ENSACAG00000005065	RBM19	99	57.975	Anolis_carolinensis
ENSELUG00000012561	rbm19	100	58.660	ENSANAG00000024136	RBM19	99	58.932	Aotus_nancymaae
ENSELUG00000012561	rbm19	99	66.737	ENSACLG00000001399	rbm19	100	67.271	Astatotilapia_calliptera
ENSELUG00000012561	rbm19	66	71.927	ENSAMXG00000017073	rbm19	99	63.239	Astyanax_mexicanus
ENSELUG00000012561	rbm19	100	57.998	ENSBTAG00000031824	RBM19	99	58.993	Bos_taurus
ENSELUG00000012561	rbm19	81	46.875	WBGene00004315	rbd-1	83	46.875	Caenorhabditis_elegans
ENSELUG00000012561	rbm19	100	58.908	ENSCJAG00000009798	RBM19	99	59.504	Callithrix_jacchus
ENSELUG00000012561	rbm19	99	57.944	ENSCAFG00000009146	RBM19	98	58.585	Canis_familiaris
ENSELUG00000012561	rbm19	99	58.048	ENSCAFG00020017862	RBM19	98	58.689	Canis_lupus_dingo
ENSELUG00000012561	rbm19	100	58.128	ENSCHIG00000014917	RBM19	99	59.526	Capra_hircus
ENSELUG00000012561	rbm19	88	55.326	ENSTSYG00000007207	RBM19	96	55.849	Carlito_syrichta
ENSELUG00000012561	rbm19	99	57.098	ENSCAPG00000006869	RBM19	99	57.531	Cavia_aperea
ENSELUG00000012561	rbm19	99	58.749	ENSCPOG00000026629	RBM19	99	59.414	Cavia_porcellus
ENSELUG00000012561	rbm19	84	52.317	ENSCCAG00000026637	-	99	52.561	Cebus_capucinus
ENSELUG00000012561	rbm19	100	58.479	ENSCCAG00000021665	-	99	59.161	Cebus_capucinus
ENSELUG00000012561	rbm19	99	58.142	ENSCATG00000035841	RBM19	99	58.506	Cercocebus_atys
ENSELUG00000012561	rbm19	99	56.821	ENSCLAG00000009965	RBM19	99	57.392	Chinchilla_lanigera
ENSELUG00000012561	rbm19	100	69.432	ENSCSAG00000002352	RBM19	89	69.432	Chlorocebus_sabaeus
ENSELUG00000012561	rbm19	99	59.958	ENSCPBG00000011990	RBM19	99	59.896	Chrysemys_picta_bellii
ENSELUG00000012561	rbm19	80	53.647	ENSCING00000023076	-	96	53.485	Ciona_intestinalis
ENSELUG00000012561	rbm19	100	59.035	ENSCANG00000035927	RBM19	99	59.198	Colobus_angolensis_palliatus
ENSELUG00000012561	rbm19	99	58.008	ENSCGRG00001000323	Rbm19	99	58.841	Cricetulus_griseus_chok1gshd
ENSELUG00000012561	rbm19	99	58.008	ENSCGRG00000010371	Rbm19	99	58.841	Cricetulus_griseus_crigri
ENSELUG00000012561	rbm19	100	68.863	ENSCSEG00000017436	rbm19	100	69.427	Cynoglossus_semilaevis
ENSELUG00000012561	rbm19	100	69.989	ENSCVAG00000000300	rbm19	100	70.784	Cyprinodon_variegatus
ENSELUG00000012561	rbm19	99	67.616	ENSDARG00000042590	rbm19	99	67.653	Danio_rerio
ENSELUG00000012561	rbm19	99	56.463	ENSDNOG00000024534	RBM19	95	57.010	Dasypus_novemcinctus
ENSELUG00000012561	rbm19	97	57.037	ENSDORG00000008549	Rbm19	100	57.354	Dipodomys_ordii
ENSELUG00000012561	rbm19	97	37.633	FBgn0036018	CG3335	96	38.478	Drosophila_melanogaster
ENSELUG00000012561	rbm19	57	79.710	ENSETEG00000016887	-	57	79.710	Echinops_telfairi
ENSELUG00000012561	rbm19	93	45.259	ENSEBUG00000008521	-	94	44.627	Eptatretus_burgeri
ENSELUG00000012561	rbm19	99	58.514	ENSEASG00005009452	RBM19	99	59.175	Equus_asinus_asinus
ENSELUG00000012561	rbm19	99	59.689	ENSECAG00000023716	RBM19	99	59.320	Equus_caballus
ENSELUG00000012561	rbm19	99	58.176	ENSFCAG00000002962	RBM19	98	58.491	Felis_catus
ENSELUG00000012561	rbm19	98	57.203	ENSFALG00000007768	RBM19	99	58.842	Ficedula_albicollis
ENSELUG00000012561	rbm19	100	56.863	ENSFDAG00000004629	RBM19	99	58.118	Fukomys_damarensis
ENSELUG00000012561	rbm19	99	72.204	ENSFHEG00000012578	rbm19	100	72.698	Fundulus_heteroclitus
ENSELUG00000012561	rbm19	97	68.192	ENSGMOG00000013120	rbm19	100	68.450	Gadus_morhua
ENSELUG00000012561	rbm19	98	57.531	ENSGALG00000008289	RBM19	99	58.088	Gallus_gallus
ENSELUG00000012561	rbm19	99	70.793	ENSGAFG00000012337	rbm19	100	71.506	Gambusia_affinis
ENSELUG00000012561	rbm19	99	70.550	ENSGACG00000009462	rbm19	100	71.460	Gasterosteus_aculeatus
ENSELUG00000012561	rbm19	64	66.440	ENSGAGG00000019457	RBM19	99	66.610	Gopherus_agassizii
ENSELUG00000012561	rbm19	100	58.547	ENSGGOG00000007371	RBM19	99	59.278	Gorilla_gorilla
ENSELUG00000012561	rbm19	99	72.192	ENSHBUG00000009047	rbm19	100	72.144	Haplochromis_burtoni
ENSELUG00000012561	rbm19	99	58.368	ENSHGLG00000010899	RBM19	99	59.244	Heterocephalus_glaber_female
ENSELUG00000012561	rbm19	99	57.988	ENSHGLG00100017936	RBM19	99	58.628	Heterocephalus_glaber_male
ENSELUG00000012561	rbm19	99	70.282	ENSHCOG00000016446	rbm19	99	69.264	Hippocampus_comes
ENSELUG00000012561	rbm19	99	65.753	ENSIPUG00000023849	rbm19	99	66.138	Ictalurus_punctatus
ENSELUG00000012561	rbm19	100	71.429	ENSKMAG00000014807	rbm19	100	72.098	Kryptolebias_marmoratus
ENSELUG00000012561	rbm19	100	72.276	ENSLBEG00000012897	rbm19	100	71.737	Labrus_bergylta
ENSELUG00000012561	rbm19	66	63.811	ENSLACG00000012030	RBM19	100	59.146	Latimeria_chalumnae
ENSELUG00000012561	rbm19	99	68.550	ENSLOCG00000008341	rbm19	100	69.050	Lepisosteus_oculatus
ENSELUG00000012561	rbm19	88	56.250	ENSLAFG00000004187	RBM19	100	56.387	Loxodonta_africana
ENSELUG00000012561	rbm19	100	58.351	ENSMFAG00000046091	RBM19	99	57.321	Macaca_fascicularis
ENSELUG00000012561	rbm19	100	58.454	ENSMMUG00000010496	RBM19	99	59.119	Macaca_mulatta
ENSELUG00000012561	rbm19	100	54.479	ENSMNEG00000028452	RBM19	99	56.461	Macaca_nemestrina
ENSELUG00000012561	rbm19	100	57.526	ENSMLEG00000034550	RBM19	99	58.256	Mandrillus_leucophaeus
ENSELUG00000012561	rbm19	99	74.058	ENSMAMG00000014397	rbm19	100	74.461	Mastacembelus_armatus
ENSELUG00000012561	rbm19	99	73.498	ENSMZEG00005016607	rbm19	100	74.138	Maylandia_zebra
ENSELUG00000012561	rbm19	98	51.634	ENSMGAG00000010087	RBM19	99	52.614	Meleagris_gallopavo
ENSELUG00000012561	rbm19	99	57.704	ENSMAUG00000019290	Rbm19	99	58.342	Mesocricetus_auratus
ENSELUG00000012561	rbm19	99	57.588	ENSMICG00000014423	RBM19	99	58.653	Microcebus_murinus
ENSELUG00000012561	rbm19	99	68.467	ENSMMOG00000017839	rbm19	99	68.575	Mola_mola
ENSELUG00000012561	rbm19	99	60.170	ENSMODG00000003597	RBM19	99	59.810	Monodelphis_domestica
ENSELUG00000012561	rbm19	99	72.522	ENSMALG00000012647	rbm19	100	72.845	Monopterus_albus
ENSELUG00000012561	rbm19	99	58.436	MGP_CAROLIEiJ_G0027656	Rbm19	99	58.041	Mus_caroli
ENSELUG00000012561	rbm19	99	58.221	ENSMUSG00000029594	Rbm19	99	57.755	Mus_musculus
ENSELUG00000012561	rbm19	99	58.582	MGP_PahariEiJ_G0024238	Rbm19	99	58.908	Mus_pahari
ENSELUG00000012561	rbm19	99	57.975	MGP_SPRETEiJ_G0028656	Rbm19	99	57.965	Mus_spretus
ENSELUG00000012561	rbm19	99	57.099	ENSMPUG00000002694	RBM19	98	57.938	Mustela_putorius_furo
ENSELUG00000012561	rbm19	99	57.274	ENSMLUG00000015075	RBM19	99	58.393	Myotis_lucifugus
ENSELUG00000012561	rbm19	99	57.960	ENSNGAG00000009076	Rbm19	99	58.628	Nannospalax_galili
ENSELUG00000012561	rbm19	99	72.976	ENSNBRG00000005913	rbm19	100	73.391	Neolamprologus_brichardi
ENSELUG00000012561	rbm19	100	58.393	ENSNLEG00000000190	RBM19	99	58.993	Nomascus_leucogenys
ENSELUG00000012561	rbm19	94	60.088	ENSMEUG00000004045	RBM19	91	60.088	Notamacropus_eugenii
ENSELUG00000012561	rbm19	100	57.404	ENSOPRG00000012064	RBM19	99	58.561	Ochotona_princeps
ENSELUG00000012561	rbm19	100	57.173	ENSODEG00000012977	RBM19	99	56.705	Octodon_degus
ENSELUG00000012561	rbm19	99	71.789	ENSONIG00000013576	rbm19	100	75.451	Oreochromis_niloticus
ENSELUG00000012561	rbm19	100	57.604	ENSOCUG00000009398	RBM19	99	57.469	Oryctolagus_cuniculus
ENSELUG00000012561	rbm19	99	69.838	ENSORLG00000008077	rbm19	99	70.953	Oryzias_latipes
ENSELUG00000012561	rbm19	99	69.793	ENSORLG00020013187	rbm19	99	70.640	Oryzias_latipes_hni
ENSELUG00000012561	rbm19	99	69.989	ENSORLG00015001774	rbm19	99	70.423	Oryzias_latipes_hsok
ENSELUG00000012561	rbm19	100	69.579	ENSOMEG00000003334	rbm19	100	70.291	Oryzias_melastigma
ENSELUG00000012561	rbm19	88	54.402	ENSOGAG00000000602	RBM19	100	55.882	Otolemur_garnettii
ENSELUG00000012561	rbm19	100	58.290	ENSOARG00000006827	RBM19	99	59.485	Ovis_aries
ENSELUG00000012561	rbm19	100	58.582	ENSPPAG00000043712	RBM19	99	59.161	Pan_paniscus
ENSELUG00000012561	rbm19	99	57.396	ENSPPRG00000023027	RBM19	98	58.491	Panthera_pardus
ENSELUG00000012561	rbm19	99	54.184	ENSPTIG00000011096	RBM19	99	54.062	Panthera_tigris_altaica
ENSELUG00000012561	rbm19	100	58.582	ENSPTRG00000005494	RBM19	99	59.058	Pan_troglodytes
ENSELUG00000012561	rbm19	100	58.187	ENSPANG00000004795	RBM19	98	57.573	Papio_anubis
ENSELUG00000012561	rbm19	99	67.861	ENSPKIG00000017095	rbm19	99	68.301	Paramormyrops_kingsleyae
ENSELUG00000012561	rbm19	89	58.343	ENSPSIG00000008191	RBM19	99	57.763	Pelodiscus_sinensis
ENSELUG00000012561	rbm19	87	74.475	ENSPMGG00000019087	rbm19	98	73.387	Periophthalmus_magnuspinnatus
ENSELUG00000012561	rbm19	99	57.988	ENSPEMG00000018058	Rbm19	99	58.264	Peromyscus_maniculatus_bairdii
ENSELUG00000012561	rbm19	99	57.971	ENSPCIG00000028861	RBM19	99	58.135	Phascolarctos_cinereus
ENSELUG00000012561	rbm19	99	70.354	ENSPFOG00000015300	rbm19	99	70.968	Poecilia_formosa
ENSELUG00000012561	rbm19	99	71.273	ENSPLAG00000000059	rbm19	100	71.878	Poecilia_latipinna
ENSELUG00000012561	rbm19	99	70.721	ENSPMEG00000018585	rbm19	99	71.598	Poecilia_mexicana
ENSELUG00000012561	rbm19	99	70.999	ENSPREG00000000978	rbm19	100	71.674	Poecilia_reticulata
ENSELUG00000012561	rbm19	100	56.907	ENSPPYG00000004993	RBM19	99	58.068	Pongo_abelii
ENSELUG00000012561	rbm19	99	57.720	ENSPCOG00000016190	RBM19	99	58.756	Propithecus_coquereli
ENSELUG00000012561	rbm19	100	56.687	ENSPVAG00000011618	RBM19	99	56.937	Pteropus_vampyrus
ENSELUG00000012561	rbm19	99	71.322	ENSPNYG00000017434	rbm19	100	72.234	Pundamilia_nyererei
ENSELUG00000012561	rbm19	99	66.385	ENSPNAG00000012069	rbm19	99	67.550	Pygocentrus_nattereri
ENSELUG00000012561	rbm19	99	58.240	ENSRNOG00000001397	Rbm19	99	57.712	Rattus_norvegicus
ENSELUG00000012561	rbm19	100	58.660	ENSRBIG00000041419	RBM19	99	58.462	Rhinopithecus_bieti
ENSELUG00000012561	rbm19	100	58.557	ENSRROG00000031938	RBM19	99	59.324	Rhinopithecus_roxellana
ENSELUG00000012561	rbm19	94	36.364	YPR112C	-	81	36.174	Saccharomyces_cerevisiae
ENSELUG00000012561	rbm19	100	56.835	ENSSBOG00000021434	-	99	57.143	Saimiri_boliviensis_boliviensis
ENSELUG00000012561	rbm19	87	50.521	ENSSBOG00000022679	-	99	50.569	Saimiri_boliviensis_boliviensis
ENSELUG00000012561	rbm19	99	58.403	ENSSHAG00000012256	RBM19	99	59.408	Sarcophilus_harrisii
ENSELUG00000012561	rbm19	99	65.426	ENSSFOG00015005124	rbm19	99	65.890	Scleropages_formosus
ENSELUG00000012561	rbm19	100	71.932	ENSSMAG00000011828	rbm19	100	71.732	Scophthalmus_maximus
ENSELUG00000012561	rbm19	99	74.166	ENSSDUG00000013544	rbm19	100	74.459	Seriola_dumerili
ENSELUG00000012561	rbm19	90	76.876	ENSSLDG00000025413	rbm19	100	69.206	Seriola_lalandi_dorsalis
ENSELUG00000012561	rbm19	63	64.407	ENSSPUG00000011064	RBM19	100	65.808	Sphenodon_punctatus
ENSELUG00000012561	rbm19	97	69.922	ENSSPAG00000018685	rbm19	98	70.556	Stegastes_partitus
ENSELUG00000012561	rbm19	99	59.577	ENSSSCG00000009868	RBM19	99	59.770	Sus_scrofa
ENSELUG00000012561	rbm19	99	57.652	ENSTGUG00000009017	RBM19	99	58.603	Taeniopygia_guttata
ENSELUG00000012561	rbm19	99	66.945	ENSTRUG00000016032	rbm19	99	68.499	Takifugu_rubripes
ENSELUG00000012561	rbm19	75	68.831	ENSTBEG00000000703	RBM19	75	68.831	Tupaia_belangeri
ENSELUG00000012561	rbm19	84	60.131	ENSTTRG00000003987	RBM19	85	60.131	Tursiops_truncatus
ENSELUG00000012561	rbm19	99	57.322	ENSUAMG00000002076	RBM19	98	57.336	Ursus_americanus
ENSELUG00000012561	rbm19	99	57.645	ENSUMAG00000010816	RBM19	99	57.657	Ursus_maritimus
ENSELUG00000012561	rbm19	99	58.152	ENSVVUG00000007886	RBM19	98	58.689	Vulpes_vulpes
ENSELUG00000012561	rbm19	99	57.631	ENSXETG00000017668	rbm19	99	57.737	Xenopus_tropicalis
ENSELUG00000012561	rbm19	99	69.338	ENSXCOG00000016995	rbm19	100	69.777	Xiphophorus_couchianus
ENSELUG00000012561	rbm19	99	70.386	ENSXMAG00000007641	rbm19	100	71.092	Xiphophorus_maculatus