EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000012592 (Gene tree)
Gene ID: 105021251
Gene Symbol: si:ch211-117n7.8
Alias: -
Full Name: S1 RNA binding domain 1
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 141503 bases
Position: chrLG05:22320923-22462425
Accession: 105021251
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000012316	S1	PF00575.23	1.2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000020622	-	4335	-	ENSELUP00000012344	1029 (aa)	-	-
ENSELUT00000020573	-	3769	XM_010888784	ENSELUP00000012316	1034 (aa)	XP_010887086	UPI00057712C3

Gene Model

Click here to download ENSELUG00000012592's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000012592's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000012592	si:ch211-117n7.8	92	54.582	ENSG00000068784	SRBD1	97	54.582	Homo_sapiens
ENSELUG00000012592	si:ch211-117n7.8	100	65.931	ENSAPOG00000005103	si:ch211-117n7.8	100	65.870	Acanthochromis_polyacanthus
ENSELUG00000012592	si:ch211-117n7.8	91	54.974	ENSAMEG00000005993	SRBD1	96	54.974	Ailuropoda_melanoleuca
ENSELUG00000012592	si:ch211-117n7.8	97	65.524	ENSACIG00000009875	si:ch211-117n7.8	100	65.916	Amphilophus_citrinellus
ENSELUG00000012592	si:ch211-117n7.8	100	65.898	ENSAOCG00000024718	si:ch211-117n7.8	100	65.010	Amphiprion_ocellaris
ENSELUG00000012592	si:ch211-117n7.8	94	69.538	ENSAPEG00000002645	si:ch211-117n7.8	97	69.792	Amphiprion_percula
ENSELUG00000012592	si:ch211-117n7.8	100	65.096	ENSATEG00000010844	si:ch211-117n7.8	100	65.355	Anabas_testudineus
ENSELUG00000012592	si:ch211-117n7.8	97	55.830	ENSAPLG00000006313	SRBD1	97	54.748	Anas_platyrhynchos
ENSELUG00000012592	si:ch211-117n7.8	82	59.649	ENSANAG00000025573	SRBD1	85	59.649	Aotus_nancymaae
ENSELUG00000012592	si:ch211-117n7.8	100	65.429	ENSACLG00000024219	si:ch211-117n7.8	100	66.541	Astatotilapia_calliptera
ENSELUG00000012592	si:ch211-117n7.8	100	68.780	ENSAMXG00000004294	SRBD1	100	69.415	Astyanax_mexicanus
ENSELUG00000012592	si:ch211-117n7.8	81	59.645	ENSBTAG00000007508	SRBD1	81	59.645	Bos_taurus
ENSELUG00000012592	si:ch211-117n7.8	82	60.047	ENSCJAG00000000727	SRBD1	85	59.766	Callithrix_jacchus
ENSELUG00000012592	si:ch211-117n7.8	91	55.849	ENSCAFG00000002554	SRBD1	96	55.646	Canis_familiaris
ENSELUG00000012592	si:ch211-117n7.8	91	53.157	ENSCAFG00020026284	SRBD1	98	60.000	Canis_lupus_dingo
ENSELUG00000012592	si:ch211-117n7.8	91	54.703	ENSCHIG00000016535	SRBD1	95	54.703	Capra_hircus
ENSELUG00000012592	si:ch211-117n7.8	93	55.465	ENSTSYG00000012797	SRBD1	96	55.922	Carlito_syrichta
ENSELUG00000012592	si:ch211-117n7.8	91	54.735	ENSCPOG00000004773	SRBD1	96	54.890	Cavia_porcellus
ENSELUG00000012592	si:ch211-117n7.8	82	59.766	ENSCCAG00000025589	SRBD1	85	59.766	Cebus_capucinus
ENSELUG00000012592	si:ch211-117n7.8	92	54.490	ENSCATG00000039530	SRBD1	97	54.213	Cercocebus_atys
ENSELUG00000012592	si:ch211-117n7.8	91	56.153	ENSCLAG00000008623	SRBD1	96	56.017	Chinchilla_lanigera
ENSELUG00000012592	si:ch211-117n7.8	92	54.796	ENSCSAG00000013350	SRBD1	97	54.796	Chlorocebus_sabaeus
ENSELUG00000012592	si:ch211-117n7.8	79	72.340	ENSCHOG00000003805	SRBD1	82	72.340	Choloepus_hoffmanni
ENSELUG00000012592	si:ch211-117n7.8	80	61.302	ENSCPBG00000005677	SRBD1	100	54.190	Chrysemys_picta_bellii
ENSELUG00000012592	si:ch211-117n7.8	76	40.727	ENSCING00000005950	-	99	40.602	Ciona_intestinalis
ENSELUG00000012592	si:ch211-117n7.8	76	42.351	ENSCSAVG00000000861	-	99	42.099	Ciona_savignyi
ENSELUG00000012592	si:ch211-117n7.8	92	54.675	ENSCANG00000016307	SRBD1	97	54.675	Colobus_angolensis_palliatus
ENSELUG00000012592	si:ch211-117n7.8	82	59.064	ENSCGRG00001000513	Srbd1	86	59.064	Cricetulus_griseus_chok1gshd
ENSELUG00000012592	si:ch211-117n7.8	82	59.064	ENSCGRG00000002283	Srbd1	86	59.064	Cricetulus_griseus_crigri
ENSELUG00000012592	si:ch211-117n7.8	99	61.303	ENSCSEG00000000856	si:ch211-117n7.8	99	61.015	Cynoglossus_semilaevis
ENSELUG00000012592	si:ch211-117n7.8	90	68.269	ENSCVAG00000020212	si:ch211-117n7.8	95	68.004	Cyprinodon_variegatus
ENSELUG00000012592	si:ch211-117n7.8	82	58.673	ENSDNOG00000018686	SRBD1	85	58.673	Dasypus_novemcinctus
ENSELUG00000012592	si:ch211-117n7.8	86	57.623	ENSDORG00000010468	Srbd1	90	57.623	Dipodomys_ordii
ENSELUG00000012592	si:ch211-117n7.8	76	36.398	FBgn0051156	CG31156	79	36.500	Drosophila_melanogaster
ENSELUG00000012592	si:ch211-117n7.8	81	58.258	ENSETEG00000000739	SRBD1	89	58.258	Echinops_telfairi
ENSELUG00000012592	si:ch211-117n7.8	71	48.108	ENSEBUG00000008902	si:ch211-117n7.8	98	48.108	Eptatretus_burgeri
ENSELUG00000012592	si:ch211-117n7.8	82	56.613	ENSEASG00005003132	SRBD1	98	57.249	Equus_asinus_asinus
ENSELUG00000012592	si:ch211-117n7.8	92	55.250	ENSECAG00000013865	SRBD1	95	55.250	Equus_caballus
ENSELUG00000012592	si:ch211-117n7.8	82	59.238	ENSFCAG00000005101	SRBD1	86	59.238	Felis_catus
ENSELUG00000012592	si:ch211-117n7.8	93	54.694	ENSFALG00000012966	SRBD1	96	56.211	Ficedula_albicollis
ENSELUG00000012592	si:ch211-117n7.8	92	55.567	ENSFDAG00000016670	SRBD1	98	55.567	Fukomys_damarensis
ENSELUG00000012592	si:ch211-117n7.8	100	64.756	ENSFHEG00000019480	si:ch211-117n7.8	100	64.628	Fundulus_heteroclitus
ENSELUG00000012592	si:ch211-117n7.8	80	62.024	ENSGALG00000009990	SRBD1	84	62.024	Gallus_gallus
ENSELUG00000012592	si:ch211-117n7.8	100	64.279	ENSGAFG00000019664	si:ch211-117n7.8	100	64.442	Gambusia_affinis
ENSELUG00000012592	si:ch211-117n7.8	60	74.254	ENSGACG00000010794	si:ch211-117n7.8	100	74.648	Gasterosteus_aculeatus
ENSELUG00000012592	si:ch211-117n7.8	80	62.352	ENSGAGG00000006166	SRBD1	99	62.352	Gopherus_agassizii
ENSELUG00000012592	si:ch211-117n7.8	92	54.638	ENSGGOG00000005910	SRBD1	99	54.638	Gorilla_gorilla
ENSELUG00000012592	si:ch211-117n7.8	97	57.620	ENSHBUG00000013207	si:ch211-117n7.8	99	58.227	Haplochromis_burtoni
ENSELUG00000012592	si:ch211-117n7.8	92	55.187	ENSHGLG00000018153	-	97	55.187	Heterocephalus_glaber_female
ENSELUG00000012592	si:ch211-117n7.8	92	55.244	ENSHGLG00100015183	-	97	54.979	Heterocephalus_glaber_male
ENSELUG00000012592	si:ch211-117n7.8	99	66.344	ENSIPUG00000009661	srbd1	99	66.956	Ictalurus_punctatus
ENSELUG00000012592	si:ch211-117n7.8	82	60.000	ENSSTOG00000005898	SRBD1	86	60.000	Ictidomys_tridecemlineatus
ENSELUG00000012592	si:ch211-117n7.8	93	53.641	ENSJJAG00000022244	Srbd1	95	53.671	Jaculus_jaculus
ENSELUG00000012592	si:ch211-117n7.8	99	66.124	ENSKMAG00000003473	si:ch211-117n7.8	99	66.124	Kryptolebias_marmoratus
ENSELUG00000012592	si:ch211-117n7.8	100	66.380	ENSLBEG00000027518	si:ch211-117n7.8	100	66.061	Labrus_bergylta
ENSELUG00000012592	si:ch211-117n7.8	82	60.936	ENSLACG00000009790	SRBD1	99	60.936	Latimeria_chalumnae
ENSELUG00000012592	si:ch211-117n7.8	93	66.126	ENSLOCG00000016360	si:ch211-117n7.8	99	64.232	Lepisosteus_oculatus
ENSELUG00000012592	si:ch211-117n7.8	92	54.694	ENSMFAG00000042026	SRBD1	97	54.694	Macaca_fascicularis
ENSELUG00000012592	si:ch211-117n7.8	82	59.298	ENSMMUG00000003490	SRBD1	85	59.298	Macaca_mulatta
ENSELUG00000012592	si:ch211-117n7.8	92	53.367	ENSMNEG00000034701	SRBD1	97	53.367	Macaca_nemestrina
ENSELUG00000012592	si:ch211-117n7.8	92	54.518	ENSMLEG00000000745	SRBD1	97	54.518	Mandrillus_leucophaeus
ENSELUG00000012592	si:ch211-117n7.8	100	64.971	ENSMAMG00000021921	si:ch211-117n7.8	100	64.818	Mastacembelus_armatus
ENSELUG00000012592	si:ch211-117n7.8	100	66.129	ENSMZEG00005027369	si:ch211-117n7.8	100	66.541	Maylandia_zebra
ENSELUG00000012592	si:ch211-117n7.8	76	59.227	ENSMGAG00000010273	SRBD1	99	59.227	Meleagris_gallopavo
ENSELUG00000012592	si:ch211-117n7.8	76	58.680	ENSMAUG00000013916	Srbd1	95	58.680	Mesocricetus_auratus
ENSELUG00000012592	si:ch211-117n7.8	91	55.556	ENSMICG00000007835	SRBD1	96	55.556	Microcebus_murinus
ENSELUG00000012592	si:ch211-117n7.8	81	59.382	ENSMOCG00000018716	Srbd1	84	59.382	Microtus_ochrogaster
ENSELUG00000012592	si:ch211-117n7.8	97	63.340	ENSMMOG00000007507	si:ch211-117n7.8	100	63.054	Mola_mola
ENSELUG00000012592	si:ch211-117n7.8	100	65.491	ENSMALG00000001562	si:ch211-117n7.8	100	65.275	Monopterus_albus
ENSELUG00000012592	si:ch211-117n7.8	91	55.879	MGP_CAROLIEiJ_G0021934	Srbd1	99	61.438	Mus_caroli
ENSELUG00000012592	si:ch211-117n7.8	82	60.117	ENSMUSG00000024135	Srbd1	99	60.000	Mus_musculus
ENSELUG00000012592	si:ch211-117n7.8	82	59.203	MGP_PahariEiJ_G0020924	Srbd1	86	59.203	Mus_pahari
ENSELUG00000012592	si:ch211-117n7.8	82	60.000	MGP_SPRETEiJ_G0022850	Srbd1	86	60.000	Mus_spretus
ENSELUG00000012592	si:ch211-117n7.8	82	59.579	ENSMLUG00000007039	SRBD1	85	59.579	Myotis_lucifugus
ENSELUG00000012592	si:ch211-117n7.8	92	54.141	ENSNGAG00000011893	Srbd1	86	58.390	Nannospalax_galili
ENSELUG00000012592	si:ch211-117n7.8	97	64.735	ENSNBRG00000012873	si:ch211-117n7.8	99	65.157	Neolamprologus_brichardi
ENSELUG00000012592	si:ch211-117n7.8	92	54.582	ENSNLEG00000016877	SRBD1	97	54.582	Nomascus_leucogenys
ENSELUG00000012592	si:ch211-117n7.8	92	54.603	ENSODEG00000012095	SRBD1	97	54.603	Octodon_degus
ENSELUG00000012592	si:ch211-117n7.8	100	66.161	ENSONIG00000000945	si:ch211-117n7.8	100	73.318	Oreochromis_niloticus
ENSELUG00000012592	si:ch211-117n7.8	92	54.964	ENSOCUG00000015385	SRBD1	96	55.326	Oryctolagus_cuniculus
ENSELUG00000012592	si:ch211-117n7.8	100	60.529	ENSORLG00000004427	si:ch211-117n7.8	100	60.417	Oryzias_latipes
ENSELUG00000012592	si:ch211-117n7.8	99	63.706	ENSORLG00020012792	si:ch211-117n7.8	99	62.833	Oryzias_latipes_hni
ENSELUG00000012592	si:ch211-117n7.8	99	63.098	ENSORLG00015018598	si:ch211-117n7.8	99	62.286	Oryzias_latipes_hsok
ENSELUG00000012592	si:ch211-117n7.8	99	62.392	ENSOMEG00000012229	si:ch211-117n7.8	99	67.164	Oryzias_melastigma
ENSELUG00000012592	si:ch211-117n7.8	81	56.974	ENSOGAG00000001076	SRBD1	97	52.761	Otolemur_garnettii
ENSELUG00000012592	si:ch211-117n7.8	91	51.431	ENSOARG00000005958	SRBD1	97	51.431	Ovis_aries
ENSELUG00000012592	si:ch211-117n7.8	80	59.501	ENSPPAG00000038442	SRBD1	97	54.582	Pan_paniscus
ENSELUG00000012592	si:ch211-117n7.8	91	55.193	ENSPPRG00000003449	SRBD1	96	55.193	Panthera_pardus
ENSELUG00000012592	si:ch211-117n7.8	91	55.341	ENSPTIG00000012495	SRBD1	96	55.341	Panthera_tigris_altaica
ENSELUG00000012592	si:ch211-117n7.8	80	59.501	ENSPTRG00000011889	SRBD1	97	54.582	Pan_troglodytes
ENSELUG00000012592	si:ch211-117n7.8	92	54.416	ENSPANG00000008063	SRBD1	97	54.416	Papio_anubis
ENSELUG00000012592	si:ch211-117n7.8	99	65.734	ENSPKIG00000021973	si:ch211-117n7.8	99	65.477	Paramormyrops_kingsleyae
ENSELUG00000012592	si:ch211-117n7.8	81	60.752	ENSPSIG00000008992	SRBD1	97	54.617	Pelodiscus_sinensis
ENSELUG00000012592	si:ch211-117n7.8	81	72.162	ENSPMGG00000013348	si:ch211-117n7.8	98	67.048	Periophthalmus_magnuspinnatus
ENSELUG00000012592	si:ch211-117n7.8	82	58.219	ENSPEMG00000020684	Srbd1	86	58.219	Peromyscus_maniculatus_bairdii
ENSELUG00000012592	si:ch211-117n7.8	100	64.857	ENSPFOG00000010650	si:ch211-117n7.8	100	63.790	Poecilia_formosa
ENSELUG00000012592	si:ch211-117n7.8	100	65.176	ENSPLAG00000002141	si:ch211-117n7.8	100	65.081	Poecilia_latipinna
ENSELUG00000012592	si:ch211-117n7.8	100	64.857	ENSPMEG00000018537	si:ch211-117n7.8	100	63.790	Poecilia_mexicana
ENSELUG00000012592	si:ch211-117n7.8	98	65.272	ENSPREG00000003258	si:ch211-117n7.8	98	64.563	Poecilia_reticulata
ENSELUG00000012592	si:ch211-117n7.8	92	51.631	ENSPPYG00000012444	SRBD1	96	51.536	Pongo_abelii
ENSELUG00000012592	si:ch211-117n7.8	73	54.365	ENSPCAG00000005629	SRBD1	80	54.365	Procavia_capensis
ENSELUG00000012592	si:ch211-117n7.8	91	46.957	ENSPCOG00000017669	SRBD1	96	46.809	Propithecus_coquereli
ENSELUG00000012592	si:ch211-117n7.8	82	52.204	ENSPVAG00000001782	SRBD1	85	52.204	Pteropus_vampyrus
ENSELUG00000012592	si:ch211-117n7.8	97	62.930	ENSPNYG00000000508	si:ch211-117n7.8	100	63.547	Pundamilia_nyererei
ENSELUG00000012592	si:ch211-117n7.8	92	72.794	ENSPNAG00000013492	SRBD1	100	68.876	Pygocentrus_nattereri
ENSELUG00000012592	si:ch211-117n7.8	82	59.386	ENSRNOG00000014720	Srbd1	85	59.386	Rattus_norvegicus
ENSELUG00000012592	si:ch211-117n7.8	92	54.184	ENSRBIG00000033486	SRBD1	97	54.184	Rhinopithecus_bieti
ENSELUG00000012592	si:ch211-117n7.8	92	54.184	ENSRROG00000041599	SRBD1	97	54.184	Rhinopithecus_roxellana
ENSELUG00000012592	si:ch211-117n7.8	82	59.532	ENSSBOG00000024982	SRBD1	85	59.532	Saimiri_boliviensis_boliviensis
ENSELUG00000012592	si:ch211-117n7.8	91	66.912	ENSSFOG00015001128	si:ch211-117n7.8	99	66.912	Scleropages_formosus
ENSELUG00000012592	si:ch211-117n7.8	99	64.190	ENSSMAG00000018256	si:ch211-117n7.8	99	64.171	Scophthalmus_maximus
ENSELUG00000012592	si:ch211-117n7.8	92	67.857	ENSSLDG00000023189	si:ch211-117n7.8	99	65.477	Seriola_lalandi_dorsalis
ENSELUG00000012592	si:ch211-117n7.8	90	52.261	ENSSARG00000009740	SRBD1	95	52.261	Sorex_araneus
ENSELUG00000012592	si:ch211-117n7.8	82	62.752	ENSSPUG00000010475	SRBD1	94	62.752	Sphenodon_punctatus
ENSELUG00000012592	si:ch211-117n7.8	90	67.304	ENSSPAG00000008092	-	99	65.332	Stegastes_partitus
ENSELUG00000012592	si:ch211-117n7.8	91	55.204	ENSSSCG00000008445	SRBD1	95	55.204	Sus_scrofa
ENSELUG00000012592	si:ch211-117n7.8	80	61.364	ENSTGUG00000003878	SRBD1	99	61.364	Taeniopygia_guttata
ENSELUG00000012592	si:ch211-117n7.8	100	62.938	ENSTRUG00000007080	si:ch211-117n7.8	96	70.328	Takifugu_rubripes
ENSELUG00000012592	si:ch211-117n7.8	97	61.322	ENSTNIG00000007464	si:ch211-117n7.8	84	69.626	Tetraodon_nigroviridis
ENSELUG00000012592	si:ch211-117n7.8	66	82.979	ENSTBEG00000004556	SRBD1	69	82.979	Tupaia_belangeri
ENSELUG00000012592	si:ch211-117n7.8	85	57.436	ENSTTRG00000011871	SRBD1	88	57.436	Tursiops_truncatus
ENSELUG00000012592	si:ch211-117n7.8	91	55.169	ENSUAMG00000008126	SRBD1	97	57.040	Ursus_americanus
ENSELUG00000012592	si:ch211-117n7.8	91	55.169	ENSUMAG00000012902	SRBD1	95	55.169	Ursus_maritimus
ENSELUG00000012592	si:ch211-117n7.8	82	59.415	ENSVPAG00000006825	SRBD1	93	59.415	Vicugna_pacos
ENSELUG00000012592	si:ch211-117n7.8	91	55.657	ENSVVUG00000005389	SRBD1	97	55.454	Vulpes_vulpes
ENSELUG00000012592	si:ch211-117n7.8	94	48.680	ENSXETG00000002760	srbd1	95	49.252	Xenopus_tropicalis
ENSELUG00000012592	si:ch211-117n7.8	100	64.599	ENSXMAG00000016861	si:ch211-117n7.8	100	64.639	Xiphophorus_maculatus