EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000012738 (Gene tree)
Gene ID: 105020718
Gene Symbol: cth1
Alias: cb266|fa18c01|wu:fa18c01|zfcth1
Full Name: mRNA decay activator protein ZFP36L2
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 2182 bases
Position: chrLG24:15766299-15768480
Accession: 105020718
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000034249	zf-CCCH	PF00642.24	1.7e-30	1	4
ENSELUP00000034249	zf-CCCH	PF00642.24	1.7e-30	2	4
ENSELUP00000034249	zf-CCCH	PF00642.24	1.7e-30	3	4
ENSELUP00000034249	zf-CCCH	PF00642.24	1.7e-30	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000038136	-	1886	XM_010887947	ENSELUP00000034249	337 (aa)	XP_010886249	UPI0005763C9D

Gene Model

Click here to download ENSELUG00000012738's gene model file

Pathways

Pathway ID	Pathway Name	Source
els04114	Oocyte meiosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000012738's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000012738	cth1	71	64.789	ENSELUG00000013045	sb:cb81	51	57.143

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000012738	cth1	88	53.974	ENSAPOG00000012552	cth1	99	55.836	Acanthochromis_polyacanthus
ENSELUG00000012738	cth1	57	67.677	ENSACIG00000016026	cth1	99	53.448	Amphilophus_citrinellus
ENSELUG00000012738	cth1	89	54.754	ENSAOCG00000001644	cth1	99	55.132	Amphiprion_ocellaris
ENSELUG00000012738	cth1	89	54.754	ENSAPEG00000008930	cth1	99	55.132	Amphiprion_percula
ENSELUG00000012738	cth1	99	54.986	ENSATEG00000002281	cth1	97	58.580	Anabas_testudineus
ENSELUG00000012738	cth1	60	65.517	ENSACLG00000015353	cth1	89	59.643	Astatotilapia_calliptera
ENSELUG00000012738	cth1	95	65.528	ENSAMXG00000025717	cth1	98	67.500	Astyanax_mexicanus
ENSELUG00000012738	cth1	68	61.702	ENSCSEG00000014617	cth1	99	55.072	Cynoglossus_semilaevis
ENSELUG00000012738	cth1	68	58.798	ENSCVAG00000001680	cth1	65	51.471	Cyprinodon_variegatus
ENSELUG00000012738	cth1	89	64.883	ENSDARG00000057328	cth1	99	63.582	Danio_rerio
ENSELUG00000012738	cth1	89	50.820	ENSFHEG00000022665	cth1	99	48.824	Fundulus_heteroclitus
ENSELUG00000012738	cth1	98	51.662	ENSGMOG00000007360	cth1	99	54.217	Gadus_morhua
ENSELUG00000012738	cth1	99	49.408	ENSGAFG00000019288	cth1	99	49.258	Gambusia_affinis
ENSELUG00000012738	cth1	99	55.952	ENSGACG00000000802	cth1	99	55.952	Gasterosteus_aculeatus
ENSELUG00000012738	cth1	99	53.134	ENSHBUG00000014400	cth1	99	54.627	Haplochromis_burtoni
ENSELUG00000012738	cth1	89	48.344	ENSHCOG00000010276	cth1	97	47.368	Hippocampus_comes
ENSELUG00000012738	cth1	96	66.254	ENSIPUG00000018040	cth1	97	66.254	Ictalurus_punctatus
ENSELUG00000012738	cth1	68	61.207	ENSKMAG00000005944	cth1	99	53.412	Kryptolebias_marmoratus
ENSELUG00000012738	cth1	89	56.113	ENSLBEG00000019253	cth1	99	55.714	Labrus_bergylta
ENSELUG00000012738	cth1	63	55.140	ENSLOCG00000002047	cth1	97	54.673	Lepisosteus_oculatus
ENSELUG00000012738	cth1	69	58.650	ENSMAMG00000001525	cth1	62	58.650	Mastacembelus_armatus
ENSELUG00000012738	cth1	69	60.086	ENSMZEG00005022335	cth1	99	54.491	Maylandia_zebra
ENSELUG00000012738	cth1	61	64.734	ENSMMOG00000020518	cth1	94	56.863	Mola_mola
ENSELUG00000012738	cth1	69	58.650	ENSMALG00000020738	cth1	61	58.650	Monopterus_albus
ENSELUG00000012738	cth1	89	51.827	ENSNBRG00000022789	cth1	88	54.153	Neolamprologus_brichardi
ENSELUG00000012738	cth1	67	61.674	ENSONIG00000021318	cth1	99	54.167	Oreochromis_niloticus
ENSELUG00000012738	cth1	93	49.844	ENSORLG00000022847	cth1	88	51.827	Oryzias_latipes
ENSELUG00000012738	cth1	93	49.844	ENSORLG00020011979	cth1	88	52.131	Oryzias_latipes_hni
ENSELUG00000012738	cth1	90	53.247	ENSORLG00015013084	cth1	88	51.827	Oryzias_latipes_hsok
ENSELUG00000012738	cth1	99	50.149	ENSOMEG00000005809	cth1	77	52.492	Oryzias_melastigma
ENSELUG00000012738	cth1	93	57.975	ENSPKIG00000015883	cth1	94	57.362	Paramormyrops_kingsleyae
ENSELUG00000012738	cth1	68	62.447	ENSPMGG00000004275	cth1	99	57.101	Periophthalmus_magnuspinnatus
ENSELUG00000012738	cth1	99	49.107	ENSPFOG00000013583	cth1	93	48.665	Poecilia_formosa
ENSELUG00000012738	cth1	99	48.810	ENSPLAG00000018158	cth1	93	48.665	Poecilia_latipinna
ENSELUG00000012738	cth1	99	48.512	ENSPMEG00000005744	cth1	99	48.961	Poecilia_mexicana
ENSELUG00000012738	cth1	96	51.393	ENSPREG00000004099	cth1	95	51.543	Poecilia_reticulata
ENSELUG00000012738	cth1	80	54.275	ENSPNYG00000016705	cth1	87	58.099	Pundamilia_nyererei
ENSELUG00000012738	cth1	99	64.286	ENSPNAG00000013147	cth1	99	62.985	Pygocentrus_nattereri
ENSELUG00000012738	cth1	93	53.165	ENSSFOG00015017190	cth1	88	55.782	Scleropages_formosus
ENSELUG00000012738	cth1	99	55.786	ENSSMAG00000007977	cth1	99	59.357	Scophthalmus_maximus
ENSELUG00000012738	cth1	99	56.140	ENSSDUG00000004321	cth1	99	57.803	Seriola_dumerili
ENSELUG00000012738	cth1	99	55.977	ENSSLDG00000004516	-	99	58.501	Seriola_lalandi_dorsalis
ENSELUG00000012738	cth1	99	55.977	ENSSLDG00000010023	-	99	58.501	Seriola_lalandi_dorsalis
ENSELUG00000012738	cth1	99	56.560	ENSSLDG00000012760	cth1	99	59.078	Seriola_lalandi_dorsalis
ENSELUG00000012738	cth1	89	55.738	ENSSPAG00000018659	cth1	99	54.651	Stegastes_partitus
ENSELUG00000012738	cth1	99	50.284	ENSTRUG00000012770	cth1	99	52.632	Takifugu_rubripes
ENSELUG00000012738	cth1	99	52.924	ENSTNIG00000000740	cth1	99	52.286	Tetraodon_nigroviridis
ENSELUG00000012738	cth1	82	50.725	ENSXCOG00000003710	cth1	89	50.360	Xiphophorus_couchianus
ENSELUG00000012738	cth1	99	50.148	ENSXMAG00000023885	cth1	99	50.592	Xiphophorus_maculatus