EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000012803 (Gene tree)
Gene ID: -
Gene Symbol: lrpprc
Alias: fc13c04|im:7150924|im:7151572|wu:fc13c04|wu:fj38h02
Full Name: leucine rich pentatricopeptide repeat containing
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 46011 bases
Position: chrLG05:21898270-21944280
Accession: 105021241
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000012562	PPR	PF01535.20	3.1e-33	1	5
ENSELUP00000012562	PPR	PF01535.20	3.1e-33	2	5
ENSELUP00000012562	PPR	PF01535.20	3.1e-33	3	5
ENSELUP00000012562	PPR	PF01535.20	3.1e-33	4	5
ENSELUP00000012562	PPR	PF01535.20	3.1e-33	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000020875	-	3813	XM_013133788	ENSELUP00000012562	1270 (aa)	XP_012989242	-

Gene Model

Click here to download ENSELUG00000012803's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000012803's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000012803	lrpprc	99	58.845	ENSAPOG00000016610	lrpprc	95	58.845	Acanthochromis_polyacanthus
ENSELUG00000012803	lrpprc	97	49.736	ENSAMEG00000005852	LRPPRC	97	49.736	Ailuropoda_melanoleuca
ENSELUG00000012803	lrpprc	99	61.253	ENSACIG00000009604	lrpprc	94	61.253	Amphilophus_citrinellus
ENSELUG00000012803	lrpprc	95	63.303	ENSAOCG00000005886	lrpprc	93	63.303	Amphiprion_ocellaris
ENSELUG00000012803	lrpprc	95	64.271	ENSAPEG00000002937	lrpprc	92	64.271	Amphiprion_percula
ENSELUG00000012803	lrpprc	99	55.486	ENSATEG00000010555	lrpprc	92	68.810	Anabas_testudineus
ENSELUG00000012803	lrpprc	98	53.002	ENSACAG00000029278	LRPPRC	96	53.002	Anolis_carolinensis
ENSELUG00000012803	lrpprc	99	49.669	ENSANAG00000027440	LRPPRC	97	50.184	Aotus_nancymaae
ENSELUG00000012803	lrpprc	99	61.433	ENSACLG00000023712	lrpprc	99	61.433	Astatotilapia_calliptera
ENSELUG00000012803	lrpprc	99	49.375	ENSCJAG00000000794	LRPPRC	97	49.448	Callithrix_jacchus
ENSELUG00000012803	lrpprc	98	51.442	ENSCHIG00000020173	LRPPRC	99	50.702	Capra_hircus
ENSELUG00000012803	lrpprc	98	43.124	ENSCAPG00000013631	LRPPRC	99	43.124	Cavia_aperea
ENSELUG00000012803	lrpprc	88	48.467	ENSCPOG00000000204	LRPPRC	99	48.467	Cavia_porcellus
ENSELUG00000012803	lrpprc	99	50.147	ENSCCAG00000031900	LRPPRC	97	50.074	Cebus_capucinus
ENSELUG00000012803	lrpprc	98	50.037	ENSCATG00000014187	LRPPRC	88	54.661	Cercocebus_atys
ENSELUG00000012803	lrpprc	98	48.919	ENSCLAG00000005203	LRPPRC	96	48.919	Chinchilla_lanigera
ENSELUG00000012803	lrpprc	98	50.224	ENSCSAG00000013233	LRPPRC	95	50.374	Chlorocebus_sabaeus
ENSELUG00000012803	lrpprc	83	50.121	ENSCHOG00000003631	LRPPRC	80	50.121	Choloepus_hoffmanni
ENSELUG00000012803	lrpprc	98	50.227	ENSCANG00000034961	LRPPRC	99	55.254	Colobus_angolensis_palliatus
ENSELUG00000012803	lrpprc	98	49.255	ENSCGRG00001016261	Lrpprc	96	49.404	Cricetulus_griseus_chok1gshd
ENSELUG00000012803	lrpprc	98	49.255	ENSCGRG00000004072	Lrpprc	96	49.404	Cricetulus_griseus_crigri
ENSELUG00000012803	lrpprc	99	48.103	ENSCSEG00000003850	lrpprc	92	47.833	Cynoglossus_semilaevis
ENSELUG00000012803	lrpprc	99	60.264	ENSCVAG00000012967	lrpprc	95	60.264	Cyprinodon_variegatus
ENSELUG00000012803	lrpprc	99	55.474	ENSDARG00000043970	lrpprc	93	55.474	Danio_rerio
ENSELUG00000012803	lrpprc	80	40.372	ENSDNOG00000032336	-	95	40.372	Dasypus_novemcinctus
ENSELUG00000012803	lrpprc	98	50.225	ENSDNOG00000012594	-	96	50.075	Dasypus_novemcinctus
ENSELUG00000012803	lrpprc	99	50.515	ENSDORG00000012233	Lrpprc	96	50.515	Dipodomys_ordii
ENSELUG00000012803	lrpprc	98	50.223	ENSETEG00000006657	LRPPRC	96	50.223	Echinops_telfairi
ENSELUG00000012803	lrpprc	76	54.321	ENSEEUG00000012340	LRPPRC	75	54.321	Erinaceus_europaeus
ENSELUG00000012803	lrpprc	98	50.673	ENSFCAG00000013468	LRPPRC	96	50.673	Felis_catus
ENSELUG00000012803	lrpprc	98	47.120	ENSFALG00000012738	LRPPRC	99	47.120	Ficedula_albicollis
ENSELUG00000012803	lrpprc	99	48.038	ENSFDAG00000015328	LRPPRC	97	48.038	Fukomys_damarensis
ENSELUG00000012803	lrpprc	99	58.613	ENSFHEG00000019604	lrpprc	95	58.613	Fundulus_heteroclitus
ENSELUG00000012803	lrpprc	99	58.333	ENSGMOG00000008337	lrpprc	97	58.333	Gadus_morhua
ENSELUG00000012803	lrpprc	99	59.985	ENSGAFG00000001455	lrpprc	95	59.985	Gambusia_affinis
ENSELUG00000012803	lrpprc	99	58.659	ENSGACG00000010679	lrpprc	99	58.481	Gasterosteus_aculeatus
ENSELUG00000012803	lrpprc	99	60.221	ENSHBUG00000000393	lrpprc	93	60.221	Haplochromis_burtoni
ENSELUG00000012803	lrpprc	99	48.848	ENSHGLG00000006123	LRPPRC	97	48.848	Heterocephalus_glaber_female
ENSELUG00000012803	lrpprc	59	47.736	ENSHGLG00100005960	-	98	47.736	Heterocephalus_glaber_male
ENSELUG00000012803	lrpprc	97	58.797	ENSHCOG00000002107	lrpprc	95	58.797	Hippocampus_comes
ENSELUG00000012803	lrpprc	98	56.591	ENSIPUG00000009406	lrpprc	94	56.591	Ictalurus_punctatus
ENSELUG00000012803	lrpprc	98	50.820	ENSSTOG00000011185	LRPPRC	96	50.667	Ictidomys_tridecemlineatus
ENSELUG00000012803	lrpprc	99	50.442	ENSJJAG00000020475	Lrpprc	98	50.589	Jaculus_jaculus
ENSELUG00000012803	lrpprc	99	53.255	ENSKMAG00000003287	lrpprc	82	53.255	Kryptolebias_marmoratus
ENSELUG00000012803	lrpprc	96	59.896	ENSLBEG00000023225	lrpprc	94	57.815	Labrus_bergylta
ENSELUG00000012803	lrpprc	99	57.675	ENSLACG00000014030	LRPPRC	95	57.675	Latimeria_chalumnae
ENSELUG00000012803	lrpprc	98	58.854	ENSLOCG00000016390	lrpprc	92	58.854	Lepisosteus_oculatus
ENSELUG00000012803	lrpprc	98	48.253	ENSLAFG00000008614	LRPPRC	97	48.018	Loxodonta_africana
ENSELUG00000012803	lrpprc	98	50.486	ENSMFAG00000041560	LRPPRC	99	56.679	Macaca_fascicularis
ENSELUG00000012803	lrpprc	98	49.924	ENSMMUG00000019841	LRPPRC	99	56.679	Macaca_mulatta
ENSELUG00000012803	lrpprc	98	50.411	ENSMNEG00000031613	LRPPRC	95	50.337	Macaca_nemestrina
ENSELUG00000012803	lrpprc	89	74.328	ENSMAMG00000021835	lrpprc	85	74.328	Mastacembelus_armatus
ENSELUG00000012803	lrpprc	99	60.147	ENSMZEG00005027379	lrpprc	94	60.147	Maylandia_zebra
ENSELUG00000012803	lrpprc	98	49.737	ENSMAUG00000012118	Lrpprc	99	49.216	Mesocricetus_auratus
ENSELUG00000012803	lrpprc	98	49.926	ENSMICG00000010486	LRPPRC	96	49.926	Microcebus_murinus
ENSELUG00000012803	lrpprc	98	50.563	ENSMOCG00000006048	Lrpprc	96	50.563	Microtus_ochrogaster
ENSELUG00000012803	lrpprc	99	62.219	ENSMMOG00000007830	lrpprc	96	62.219	Mola_mola
ENSELUG00000012803	lrpprc	98	51.227	ENSMODG00000000648	LRPPRC	99	51.227	Monodelphis_domestica
ENSELUG00000012803	lrpprc	99	57.090	ENSMALG00000001271	lrpprc	95	57.237	Monopterus_albus
ENSELUG00000012803	lrpprc	99	49.153	ENSMPUG00000011800	LRPPRC	97	51.557	Mustela_putorius_furo
ENSELUG00000012803	lrpprc	98	50.966	ENSMLUG00000010575	LRPPRC	96	50.966	Myotis_lucifugus
ENSELUG00000012803	lrpprc	99	49.488	ENSNGAG00000013069	Lrpprc	97	49.633	Nannospalax_galili
ENSELUG00000012803	lrpprc	97	61.893	ENSNBRG00000013202	lrpprc	99	61.893	Neolamprologus_brichardi
ENSELUG00000012803	lrpprc	99	50.149	ENSNLEG00000016782	LRPPRC	97	50.149	Nomascus_leucogenys
ENSELUG00000012803	lrpprc	88	57.269	ENSOPRG00000016774	LRPPRC	87	57.269	Ochotona_princeps
ENSELUG00000012803	lrpprc	98	49.406	ENSODEG00000011211	LRPPRC	96	49.406	Octodon_degus
ENSELUG00000012803	lrpprc	99	60.735	ENSONIG00000000917	lrpprc	97	59.519	Oreochromis_niloticus
ENSELUG00000012803	lrpprc	52	49.861	ENSOANG00000014670	-	93	50.278	Ornithorhynchus_anatinus
ENSELUG00000012803	lrpprc	98	49.926	ENSOCUG00000015046	LRPPRC	92	50.410	Oryctolagus_cuniculus
ENSELUG00000012803	lrpprc	99	58.876	ENSORLG00000004605	lrpprc	99	58.012	Oryzias_latipes
ENSELUG00000012803	lrpprc	94	58.365	ENSORLG00020012536	lrpprc	99	57.438	Oryzias_latipes_hni
ENSELUG00000012803	lrpprc	99	59.193	ENSORLG00015018270	lrpprc	97	59.193	Oryzias_latipes_hsok
ENSELUG00000012803	lrpprc	99	50.330	ENSOGAG00000012798	LRPPRC	98	50.000	Otolemur_garnettii
ENSELUG00000012803	lrpprc	98	51.045	ENSOARG00000006522	LRPPRC	96	51.045	Ovis_aries
ENSELUG00000012803	lrpprc	98	49.700	ENSPPAG00000040876	LRPPRC	95	49.662	Pan_paniscus
ENSELUG00000012803	lrpprc	98	50.448	ENSPPRG00000006578	LRPPRC	96	50.448	Panthera_pardus
ENSELUG00000012803	lrpprc	98	50.523	ENSPTIG00000000933	LRPPRC	96	50.523	Panthera_tigris_altaica
ENSELUG00000012803	lrpprc	98	50.075	ENSPTRG00000011880	LRPPRC	96	50.075	Pan_troglodytes
ENSELUG00000012803	lrpprc	98	50.037	ENSPANG00000020731	LRPPRC	88	54.449	Papio_anubis
ENSELUG00000012803	lrpprc	99	53.261	ENSPKIG00000022232	lrpprc	98	53.816	Paramormyrops_kingsleyae
ENSELUG00000012803	lrpprc	59	53.374	ENSPSIG00000006830	-	95	53.620	Pelodiscus_sinensis
ENSELUG00000012803	lrpprc	59	59.925	ENSPMGG00000016597	lrpprc	89	59.925	Periophthalmus_magnuspinnatus
ENSELUG00000012803	lrpprc	96	44.030	ENSPMAG00000002147	lrpprc	99	44.030	Petromyzon_marinus
ENSELUG00000012803	lrpprc	99	58.474	ENSPFOG00000011227	lrpprc	97	58.474	Poecilia_formosa
ENSELUG00000012803	lrpprc	99	58.138	ENSPLAG00000004018	lrpprc	96	58.138	Poecilia_latipinna
ENSELUG00000012803	lrpprc	99	58.266	ENSPMEG00000016425	lrpprc	96	58.266	Poecilia_mexicana
ENSELUG00000012803	lrpprc	99	58.598	ENSPREG00000003662	lrpprc	96	58.598	Poecilia_reticulata
ENSELUG00000012803	lrpprc	58	48.817	ENSPPYG00000029532	-	100	48.817	Pongo_abelii
ENSELUG00000012803	lrpprc	81	53.361	ENSPCAG00000001430	LRPPRC	77	53.361	Procavia_capensis
ENSELUG00000012803	lrpprc	91	60.048	ENSPVAG00000002007	LRPPRC	87	60.048	Pteropus_vampyrus
ENSELUG00000012803	lrpprc	98	60.015	ENSPNYG00000000756	lrpprc	96	60.015	Pundamilia_nyererei
ENSELUG00000012803	lrpprc	99	61.079	ENSPNAG00000002895	lrpprc	96	61.152	Pygocentrus_nattereri
ENSELUG00000012803	lrpprc	98	49.701	ENSRNOG00000005877	Lrpprc	96	49.851	Rattus_norvegicus
ENSELUG00000012803	lrpprc	99	49.161	ENSRBIG00000031552	LRPPRC	97	49.234	Rhinopithecus_bieti
ENSELUG00000012803	lrpprc	99	49.263	ENSSBOG00000011807	LRPPRC	97	49.558	Saimiri_boliviensis_boliviensis
ENSELUG00000012803	lrpprc	98	50.149	ENSSHAG00000018725	LRPPRC	99	50.149	Sarcophilus_harrisii
ENSELUG00000012803	lrpprc	99	53.130	ENSSFOG00015001042	lrpprc	95	53.130	Scleropages_formosus
ENSELUG00000012803	lrpprc	99	59.501	ENSSDUG00000019062	lrpprc	95	59.501	Seriola_dumerili
ENSELUG00000012803	lrpprc	92	72.078	ENSSLDG00000023028	lrpprc	97	56.977	Seriola_lalandi_dorsalis
ENSELUG00000012803	lrpprc	81	60.290	ENSSARG00000000426	LRPPRC	90	60.290	Sorex_araneus
ENSELUG00000012803	lrpprc	95	59.327	ENSSPAG00000000162	lrpprc	95	59.327	Stegastes_partitus
ENSELUG00000012803	lrpprc	99	49.888	ENSSSCG00000008452	LRPPRC	97	49.888	Sus_scrofa
ENSELUG00000012803	lrpprc	96	46.920	ENSTGUG00000003759	LRPPRC	99	46.920	Taeniopygia_guttata
ENSELUG00000012803	lrpprc	91	59.759	ENSTRUG00000008409	lrpprc	92	59.759	Takifugu_rubripes
ENSELUG00000012803	lrpprc	95	62.784	ENSTNIG00000007470	lrpprc	94	62.371	Tetraodon_nigroviridis
ENSELUG00000012803	lrpprc	98	49.851	ENSTTRG00000006403	LRPPRC	96	49.741	Tursiops_truncatus
ENSELUG00000012803	lrpprc	98	49.663	ENSVPAG00000008993	LRPPRC	99	49.663	Vicugna_pacos
ENSELUG00000012803	lrpprc	98	54.613	ENSXETG00000009296	lrpprc	96	54.911	Xenopus_tropicalis
ENSELUG00000012803	lrpprc	97	57.654	ENSXCOG00000013343	lrpprc	96	55.768	Xiphophorus_couchianus
ENSELUG00000012803	lrpprc	99	58.646	ENSXMAG00000018108	lrpprc	95	58.646	Xiphophorus_maculatus