EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000012822 (Gene tree)
Gene ID: 105011089
Gene Symbol: polr2j
Alias: RPB11
Full Name: RNA polymerase II subunit J
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 1364 bases
Position: chrLG07:32401105-32402468
Accession: 105011089
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000034291	RNA_pol_L_2	PF13656.6	3.1e-29	1	1
ENSELUP00000034291	RNA_pol_L	PF01193.24	1.1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000020933	-	836	-	ENSELUP00000034291	117 (aa)	-	C1BW67

Gene Model

Click here to download ENSELUG00000012822's gene model file

Pathways

Pathway ID	Pathway Name	Source
els03020	RNA polymerase	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000012822's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000012822	polr2j	78	36.735	ENSELUG00000005105	rpac2	86	36.735
ENSELUG00000012822	polr2j	64	56.000	ENSELUG00000012868	-	99	56.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000012822	polr2j	91	93.458	ENSG00000228049	POLR2J2	94	90.826	Homo_sapiens
ENSELUG00000012822	polr2j	100	95.726	ENSG00000005075	POLR2J	100	95.726	Homo_sapiens
ENSELUG00000012822	polr2j	100	97.436	ENSAPOG00000019538	polr2j	100	97.436	Acanthochromis_polyacanthus
ENSELUG00000012822	polr2j	100	88.189	ENSAMEG00000015480	-	100	88.189	Ailuropoda_melanoleuca
ENSELUG00000012822	polr2j	93	74.545	ENSACIG00000014549	POLR2J2	91	74.545	Amphilophus_citrinellus
ENSELUG00000012822	polr2j	100	96.581	ENSAOCG00000006937	polr2j	100	96.581	Amphiprion_ocellaris
ENSELUG00000012822	polr2j	100	97.436	ENSAPEG00000021761	polr2j	100	97.436	Amphiprion_percula
ENSELUG00000012822	polr2j	100	97.436	ENSATEG00000009731	polr2j	100	97.436	Anabas_testudineus
ENSELUG00000012822	polr2j	100	97.436	ENSATEG00000013312	-	100	97.436	Anabas_testudineus
ENSELUG00000012822	polr2j	86	93.069	ENSAPLG00000003744	-	100	93.069	Anas_platyrhynchos
ENSELUG00000012822	polr2j	100	87.179	ENSACAG00000000251	POLR2J	100	87.179	Anolis_carolinensis
ENSELUG00000012822	polr2j	100	97.436	ENSACLG00000014564	polr2j	100	97.436	Astatotilapia_calliptera
ENSELUG00000012822	polr2j	100	98.291	ENSAMXG00000007517	polr2j	100	98.291	Astyanax_mexicanus
ENSELUG00000012822	polr2j	62	64.384	ENSBTAG00000048046	-	61	64.384	Bos_taurus
ENSELUG00000012822	polr2j	94	68.182	WBGene00012187	rpb-11	89	68.182	Caenorhabditis_elegans
ENSELUG00000012822	polr2j	100	95.726	ENSCJAG00000016203	-	100	95.726	Callithrix_jacchus
ENSELUG00000012822	polr2j	100	95.726	ENSCAFG00000013683	-	100	95.726	Canis_familiaris
ENSELUG00000012822	polr2j	85	94.949	ENSTSYG00000029243	-	85	94.949	Carlito_syrichta
ENSELUG00000012822	polr2j	100	95.726	ENSCPOG00000001401	-	100	95.726	Cavia_porcellus
ENSELUG00000012822	polr2j	100	73.504	ENSCATG00000016595	-	96	84.615	Cercocebus_atys
ENSELUG00000012822	polr2j	100	95.726	ENSCLAG00000005238	-	100	95.726	Chinchilla_lanigera
ENSELUG00000012822	polr2j	100	95.726	ENSCSAG00000018092	-	100	95.726	Chlorocebus_sabaeus
ENSELUG00000012822	polr2j	100	81.197	ENSCING00000020531	-	100	81.197	Ciona_intestinalis
ENSELUG00000012822	polr2j	100	81.197	ENSCSAVG00000006948	-	100	81.197	Ciona_savignyi
ENSELUG00000012822	polr2j	100	95.726	ENSCGRG00001012814	Polr2j	100	95.726	Cricetulus_griseus_chok1gshd
ENSELUG00000012822	polr2j	100	81.197	ENSCGRG00000008433	Polr2j	100	81.197	Cricetulus_griseus_crigri
ENSELUG00000012822	polr2j	100	94.872	ENSCSEG00000020352	polr2j	100	94.872	Cynoglossus_semilaevis
ENSELUG00000012822	polr2j	100	96.581	ENSCVAG00000014267	polr2j	100	96.581	Cyprinodon_variegatus
ENSELUG00000012822	polr2j	100	97.436	ENSDARG00000035146	polr2j	100	97.436	Danio_rerio
ENSELUG00000012822	polr2j	100	95.726	ENSDORG00000005934	Polr2j	100	95.726	Dipodomys_ordii
ENSELUG00000012822	polr2j	98	79.130	FBgn0032634	Rpb11	98	79.130	Drosophila_melanogaster
ENSELUG00000012822	polr2j	100	64.957	ENSEBUG00000016100	polr2j	100	64.957	Eptatretus_burgeri
ENSELUG00000012822	polr2j	100	95.726	ENSEASG00005016864	-	100	95.726	Equus_asinus_asinus
ENSELUG00000012822	polr2j	100	95.726	ENSFCAG00000000377	-	100	95.726	Felis_catus
ENSELUG00000012822	polr2j	100	95.726	ENSFALG00000009523	POLR2J	100	95.726	Ficedula_albicollis
ENSELUG00000012822	polr2j	100	95.726	ENSFDAG00000010507	-	100	95.726	Fukomys_damarensis
ENSELUG00000012822	polr2j	100	97.436	ENSFHEG00000006625	polr2j	100	97.436	Fundulus_heteroclitus
ENSELUG00000012822	polr2j	100	97.436	ENSGMOG00000018207	polr2j	100	97.436	Gadus_morhua
ENSELUG00000012822	polr2j	100	95.726	ENSGALG00000030808	-	100	95.726	Gallus_gallus
ENSELUG00000012822	polr2j	100	97.436	ENSGAFG00000019555	polr2j	100	97.436	Gambusia_affinis
ENSELUG00000012822	polr2j	100	97.436	ENSGACG00000003310	polr2j	100	97.436	Gasterosteus_aculeatus
ENSELUG00000012822	polr2j	97	85.841	ENSGAGG00000018304	-	96	85.841	Gopherus_agassizii
ENSELUG00000012822	polr2j	85	90.000	ENSGGOG00000004519	-	80	90.000	Gorilla_gorilla
ENSELUG00000012822	polr2j	100	97.436	ENSHBUG00000008467	polr2j	100	97.436	Haplochromis_burtoni
ENSELUG00000012822	polr2j	100	95.726	ENSHGLG00000013598	POLR2J	100	95.726	Heterocephalus_glaber_female
ENSELUG00000012822	polr2j	100	95.726	ENSHGLG00100011242	POLR2J	100	95.726	Heterocephalus_glaber_male
ENSELUG00000012822	polr2j	100	97.436	ENSHCOG00000014827	polr2j	68	97.436	Hippocampus_comes
ENSELUG00000012822	polr2j	100	98.291	ENSIPUG00000023960	polr2j	100	98.291	Ictalurus_punctatus
ENSELUG00000012822	polr2j	100	95.726	ENSSTOG00000006377	POLR2J	100	95.726	Ictidomys_tridecemlineatus
ENSELUG00000012822	polr2j	100	90.598	ENSJJAG00000018834	-	100	90.598	Jaculus_jaculus
ENSELUG00000012822	polr2j	100	95.726	ENSJJAG00000013854	-	100	95.726	Jaculus_jaculus
ENSELUG00000012822	polr2j	100	97.436	ENSKMAG00000014581	polr2j	79	97.436	Kryptolebias_marmoratus
ENSELUG00000012822	polr2j	100	97.436	ENSLBEG00000005885	polr2j	100	97.436	Labrus_bergylta
ENSELUG00000012822	polr2j	100	98.291	ENSLOCG00000001885	polr2j	89	98.291	Lepisosteus_oculatus
ENSELUG00000012822	polr2j	100	95.726	ENSLAFG00000021507	-	100	95.726	Loxodonta_africana
ENSELUG00000012822	polr2j	100	86.154	ENSMMUG00000012019	POLR2J	100	86.154	Macaca_mulatta
ENSELUG00000012822	polr2j	100	97.436	ENSMAMG00000009374	polr2j	100	97.436	Mastacembelus_armatus
ENSELUG00000012822	polr2j	100	97.436	ENSMZEG00005011932	polr2j	100	97.436	Maylandia_zebra
ENSELUG00000012822	polr2j	100	95.726	ENSMGAG00000003534	POLR2J	100	95.726	Meleagris_gallopavo
ENSELUG00000012822	polr2j	100	95.726	ENSMAUG00000013049	Polr2j	100	95.726	Mesocricetus_auratus
ENSELUG00000012822	polr2j	80	90.426	ENSMICG00000026811	-	94	90.426	Microcebus_murinus
ENSELUG00000012822	polr2j	100	95.726	ENSMOCG00000001294	Polr2j	100	95.726	Microtus_ochrogaster
ENSELUG00000012822	polr2j	100	96.581	ENSMMOG00000013265	polr2j	100	96.581	Mola_mola
ENSELUG00000012822	polr2j	100	87.500	ENSMODG00000013617	-	100	87.500	Monodelphis_domestica
ENSELUG00000012822	polr2j	100	97.436	ENSMALG00000020749	polr2j	100	97.436	Monopterus_albus
ENSELUG00000012822	polr2j	100	95.726	MGP_CAROLIEiJ_G0027851	Polr2j	100	95.726	Mus_caroli
ENSELUG00000012822	polr2j	100	95.726	ENSMUSG00000039771	Polr2j	100	95.726	Mus_musculus
ENSELUG00000012822	polr2j	100	95.726	MGP_PahariEiJ_G0024434	Polr2j	100	95.726	Mus_pahari
ENSELUG00000012822	polr2j	100	95.726	MGP_SPRETEiJ_G0028853	Polr2j	100	95.726	Mus_spretus
ENSELUG00000012822	polr2j	100	95.726	ENSMLUG00000010467	POLR2J	100	95.726	Myotis_lucifugus
ENSELUG00000012822	polr2j	100	95.726	ENSNGAG00000023412	Polr2j	100	95.726	Nannospalax_galili
ENSELUG00000012822	polr2j	66	94.805	ENSNBRG00000006580	polr2j	59	94.805	Neolamprologus_brichardi
ENSELUG00000012822	polr2j	100	95.726	ENSODEG00000015648	-	100	95.726	Octodon_degus
ENSELUG00000012822	polr2j	100	74.359	ENSODEG00000008559	-	100	74.359	Octodon_degus
ENSELUG00000012822	polr2j	100	97.436	ENSONIG00000000259	polr2j	100	97.436	Oreochromis_niloticus
ENSELUG00000012822	polr2j	100	93.162	ENSOANG00000020912	POLR2J	100	93.162	Ornithorhynchus_anatinus
ENSELUG00000012822	polr2j	100	88.189	ENSOCUG00000023609	POLR2J	100	88.189	Oryctolagus_cuniculus
ENSELUG00000012822	polr2j	100	97.436	ENSORLG00000029046	polr2j	83	97.436	Oryzias_latipes
ENSELUG00000012822	polr2j	100	97.436	ENSORLG00020007625	polr2j	83	97.436	Oryzias_latipes_hni
ENSELUG00000012822	polr2j	100	97.436	ENSORLG00015003457	polr2j	83	97.436	Oryzias_latipes_hsok
ENSELUG00000012822	polr2j	100	96.581	ENSOMEG00000002097	polr2j	100	96.581	Oryzias_melastigma
ENSELUG00000012822	polr2j	100	71.875	ENSOGAG00000008250	-	100	71.875	Otolemur_garnettii
ENSELUG00000012822	polr2j	100	95.726	ENSOARG00000014204	-	98	95.726	Ovis_aries
ENSELUG00000012822	polr2j	100	95.726	ENSPPRG00000012439	-	100	95.726	Panthera_pardus
ENSELUG00000012822	polr2j	97	86.842	ENSPTIG00000018714	-	100	92.233	Panthera_tigris_altaica
ENSELUG00000012822	polr2j	85	94.000	ENSPSIG00000010173	-	100	94.000	Pelodiscus_sinensis
ENSELUG00000012822	polr2j	100	97.436	ENSPMGG00000021256	polr2j	100	97.436	Periophthalmus_magnuspinnatus
ENSELUG00000012822	polr2j	100	95.726	ENSPEMG00000015733	Polr2j	100	95.726	Peromyscus_maniculatus_bairdii
ENSELUG00000012822	polr2j	100	95.726	ENSPCIG00000009026	-	100	95.726	Phascolarctos_cinereus
ENSELUG00000012822	polr2j	100	97.436	ENSPFOG00000012001	polr2j	99	97.436	Poecilia_formosa
ENSELUG00000012822	polr2j	100	97.436	ENSPLAG00000014075	polr2j	100	97.436	Poecilia_latipinna
ENSELUG00000012822	polr2j	100	97.436	ENSPMEG00000020585	polr2j	100	97.436	Poecilia_mexicana
ENSELUG00000012822	polr2j	100	97.436	ENSPREG00000015255	polr2j	100	97.436	Poecilia_reticulata
ENSELUG00000012822	polr2j	100	95.726	ENSPCOG00000024573	-	100	95.726	Propithecus_coquereli
ENSELUG00000012822	polr2j	99	89.655	ENSPVAG00000017770	-	66	89.655	Pteropus_vampyrus
ENSELUG00000012822	polr2j	100	97.436	ENSPNYG00000014832	polr2j	100	97.436	Pundamilia_nyererei
ENSELUG00000012822	polr2j	100	95.726	ENSPNAG00000016595	polr2j	100	95.726	Pygocentrus_nattereri
ENSELUG00000012822	polr2j	100	95.726	ENSRNOG00000001430	Polr2j	100	95.726	Rattus_norvegicus
ENSELUG00000012822	polr2j	100	95.726	ENSSBOG00000025579	-	100	95.726	Saimiri_boliviensis_boliviensis
ENSELUG00000012822	polr2j	60	97.143	ENSSHAG00000010443	-	82	97.143	Sarcophilus_harrisii
ENSELUG00000012822	polr2j	93	97.248	ENSSFOG00015003371	polr2j	83	97.248	Scleropages_formosus
ENSELUG00000012822	polr2j	100	97.436	ENSSMAG00000006729	polr2j	100	97.436	Scophthalmus_maximus
ENSELUG00000012822	polr2j	100	97.436	ENSSDUG00000018490	polr2j	100	97.436	Seriola_dumerili
ENSELUG00000012822	polr2j	100	97.436	ENSSLDG00000022354	polr2j	100	97.436	Seriola_lalandi_dorsalis
ENSELUG00000012822	polr2j	100	95.726	ENSSPUG00000010802	-	100	95.726	Sphenodon_punctatus
ENSELUG00000012822	polr2j	100	97.436	ENSSPAG00000021953	polr2j	100	97.436	Stegastes_partitus
ENSELUG00000012822	polr2j	100	79.487	ENSSSCG00000003703	-	83	79.487	Sus_scrofa
ENSELUG00000012822	polr2j	100	95.726	ENSSSCG00000007688	-	100	95.726	Sus_scrofa
ENSELUG00000012822	polr2j	59	98.551	ENSTGUG00000004510	-	100	98.551	Taeniopygia_guttata
ENSELUG00000012822	polr2j	85	94.000	ENSTGUG00000004501	-	100	94.000	Taeniopygia_guttata
ENSELUG00000012822	polr2j	100	97.436	ENSTRUG00000020842	polr2j	100	97.436	Takifugu_rubripes
ENSELUG00000012822	polr2j	100	96.581	ENSTNIG00000002994	polr2j	100	96.581	Tetraodon_nigroviridis
ENSELUG00000012822	polr2j	91	80.374	ENSTBEG00000005797	-	70	80.374	Tupaia_belangeri
ENSELUG00000012822	polr2j	100	95.726	ENSUAMG00000011310	-	100	95.726	Ursus_americanus
ENSELUG00000012822	polr2j	100	95.726	ENSUMAG00000012594	-	100	95.726	Ursus_maritimus
ENSELUG00000012822	polr2j	100	94.872	ENSXETG00000001108	polr2j	100	94.872	Xenopus_tropicalis
ENSELUG00000012822	polr2j	100	97.436	ENSXMAG00000012422	polr2j	100	97.436	Xiphophorus_maculatus