EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000012854 (Gene tree)
Gene ID: 105026866
Gene Symbol: slbp
Alias: cb157|sb:cb157|si:dkey-102m7.2
Full Name: stem-loop binding protein
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 7531 bases
Position: chrLG04:16137943-16145473
Accession: 105026866
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000034328	SLBP_RNA_bind	PF15247.6	5.1e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000020977	-	5227	XM_010898633	ENSELUP00000034328	278 (aa)	XP_010896935	UPI000577A9BE

Gene Model

Click here to download ENSELUG00000012854's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000012854's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000012854	slbp	97	50.730	ENSG00000163950	SLBP	89	53.363	Homo_sapiens
ENSELUG00000012854	slbp	95	62.132	ENSAPOG00000004953	slbp	96	62.132	Acanthochromis_polyacanthus
ENSELUG00000012854	slbp	56	69.811	ENSAMEG00000016915	SLBP	91	53.365	Ailuropoda_melanoleuca
ENSELUG00000012854	slbp	90	62.646	ENSACIG00000022308	slbp	94	60.311	Amphilophus_citrinellus
ENSELUG00000012854	slbp	95	61.397	ENSAOCG00000024545	slbp	96	61.397	Amphiprion_ocellaris
ENSELUG00000012854	slbp	95	61.029	ENSAPEG00000017629	slbp	96	61.029	Amphiprion_percula
ENSELUG00000012854	slbp	100	59.859	ENSATEG00000016358	slbp	100	59.859	Anabas_testudineus
ENSELUG00000012854	slbp	75	54.930	ENSAPLG00000015989	-	93	55.140	Anas_platyrhynchos
ENSELUG00000012854	slbp	90	50.000	ENSANAG00000034769	SLBP	84	54.762	Aotus_nancymaae
ENSELUG00000012854	slbp	91	58.077	ENSACLG00000007036	-	93	58.077	Astatotilapia_calliptera
ENSELUG00000012854	slbp	97	62.455	ENSAMXG00000014527	slbp	97	62.094	Astyanax_mexicanus
ENSELUG00000012854	slbp	82	56.087	ENSBTAG00000001328	SLBP	95	46.786	Bos_taurus
ENSELUG00000012854	slbp	90	49.807	ENSCJAG00000001790	SLBP	84	45.525	Callithrix_jacchus
ENSELUG00000012854	slbp	99	49.275	ENSCAFG00000015016	SLBP	84	49.206	Canis_familiaris
ENSELUG00000012854	slbp	99	49.275	ENSCAFG00020012334	SLBP	84	49.206	Canis_lupus_dingo
ENSELUG00000012854	slbp	82	55.217	ENSCHIG00000019364	SLBP	95	44.643	Capra_hircus
ENSELUG00000012854	slbp	79	55.556	ENSTSYG00000000376	SLBP	89	51.802	Carlito_syrichta
ENSELUG00000012854	slbp	61	50.000	ENSCAPG00000016340	SLBP	86	52.381	Cavia_aperea
ENSELUG00000012854	slbp	76	52.113	ENSCPOG00000000031	SLBP	83	50.588	Cavia_porcellus
ENSELUG00000012854	slbp	97	48.936	ENSCATG00000029173	SLBP	84	55.238	Cercocebus_atys
ENSELUG00000012854	slbp	58	62.963	ENSCLAG00000008157	SLBP	85	50.000	Chinchilla_lanigera
ENSELUG00000012854	slbp	90	40.230	ENSCSAG00000015628	SLBP	84	38.314	Chlorocebus_sabaeus
ENSELUG00000012854	slbp	99	52.313	ENSCPBG00000000746	SLBP	95	52.837	Chrysemys_picta_bellii
ENSELUG00000012854	slbp	74	58.571	ENSCANG00000041008	SLBP	91	55.502	Colobus_angolensis_palliatus
ENSELUG00000012854	slbp	92	49.042	ENSCGRG00001009760	-	87	51.515	Cricetulus_griseus_chok1gshd
ENSELUG00000012854	slbp	93	47.727	ENSCGRG00001012991	-	90	48.864	Cricetulus_griseus_chok1gshd
ENSELUG00000012854	slbp	92	49.042	ENSCGRG00000004506	Slbp	87	51.515	Cricetulus_griseus_crigri
ENSELUG00000012854	slbp	94	58.955	ENSCSEG00000020337	-	95	56.716	Cynoglossus_semilaevis
ENSELUG00000012854	slbp	83	61.111	ENSCVAG00000019592	-	91	58.730	Cyprinodon_variegatus
ENSELUG00000012854	slbp	98	56.989	ENSDARG00000100558	slbp	89	56.989	Danio_rerio
ENSELUG00000012854	slbp	74	61.722	ENSDNOG00000047539	SLBP	87	52.941	Dasypus_novemcinctus
ENSELUG00000012854	slbp	74	50.971	ENSDORG00000003028	Slbp	92	63.087	Dipodomys_ordii
ENSELUG00000012854	slbp	73	58.252	ENSETEG00000004641	SLBP	86	56.250	Echinops_telfairi
ENSELUG00000012854	slbp	65	51.099	ENSEASG00005022714	SLBP	89	52.747	Equus_asinus_asinus
ENSELUG00000012854	slbp	88	49.027	ENSECAG00000011689	SLBP	61	58.794	Equus_caballus
ENSELUG00000012854	slbp	76	55.399	ENSFCAG00000000169	SLBP	84	50.962	Felis_catus
ENSELUG00000012854	slbp	100	48.763	ENSFALG00000010003	-	96	48.763	Ficedula_albicollis
ENSELUG00000012854	slbp	60	62.722	ENSFDAG00000007592	SLBP	94	50.570	Fukomys_damarensis
ENSELUG00000012854	slbp	89	59.231	ENSFHEG00000007497	slbp	91	60.156	Fundulus_heteroclitus
ENSELUG00000012854	slbp	56	71.779	ENSGMOG00000015352	slbp	100	71.779	Gadus_morhua
ENSELUG00000012854	slbp	99	49.643	ENSGALG00000015712	SLBP	95	49.643	Gallus_gallus
ENSELUG00000012854	slbp	96	57.818	ENSGAFG00000019577	slbp	100	57.836	Gambusia_affinis
ENSELUG00000012854	slbp	86	58.964	ENSGACG00000019596	slbp	95	58.964	Gasterosteus_aculeatus
ENSELUG00000012854	slbp	88	56.735	ENSGAGG00000012096	SLBP	96	56.735	Gopherus_agassizii
ENSELUG00000012854	slbp	97	50.730	ENSGGOG00000003167	SLBP	89	53.363	Gorilla_gorilla
ENSELUG00000012854	slbp	91	60.385	ENSHBUG00000003338	-	93	58.077	Haplochromis_burtoni
ENSELUG00000012854	slbp	58	57.576	ENSHGLG00000008313	-	87	45.059	Heterocephalus_glaber_female
ENSELUG00000012854	slbp	59	60.479	ENSHGLG00000010461	-	90	47.036	Heterocephalus_glaber_female
ENSELUG00000012854	slbp	59	60.479	ENSHGLG00100014906	-	90	47.036	Heterocephalus_glaber_male
ENSELUG00000012854	slbp	59	63.253	ENSHGLG00100014018	-	93	57.500	Heterocephalus_glaber_male
ENSELUG00000012854	slbp	58	58.788	ENSHGLG00100010510	-	87	45.850	Heterocephalus_glaber_male
ENSELUG00000012854	slbp	100	56.338	ENSHCOG00000013425	slbp	100	56.338	Hippocampus_comes
ENSELUG00000012854	slbp	75	68.396	ENSIPUG00000016780	slbp	77	68.396	Ictalurus_punctatus
ENSELUG00000012854	slbp	92	50.000	ENSSTOG00000003262	SLBP	88	50.951	Ictidomys_tridecemlineatus
ENSELUG00000012854	slbp	82	56.522	ENSJJAG00000002394	-	93	49.097	Jaculus_jaculus
ENSELUG00000012854	slbp	99	49.458	ENSJJAG00000020549	-	93	49.462	Jaculus_jaculus
ENSELUG00000012854	slbp	100	57.439	ENSKMAG00000008187	slbp	100	57.439	Kryptolebias_marmoratus
ENSELUG00000012854	slbp	92	58.935	ENSLBEG00000024709	slbp	93	56.654	Labrus_bergylta
ENSELUG00000012854	slbp	95	50.929	ENSLACG00000014623	SLBP	89	51.154	Latimeria_chalumnae
ENSELUG00000012854	slbp	99	65.950	ENSLOCG00000011027	slbp	93	65.950	Lepisosteus_oculatus
ENSELUG00000012854	slbp	72	61.576	ENSLAFG00000012933	SLBP	83	58.252	Loxodonta_africana
ENSELUG00000012854	slbp	90	52.569	ENSMFAG00000030130	SLBP	74	50.787	Macaca_fascicularis
ENSELUG00000012854	slbp	90	51.341	ENSMMUG00000032303	SLBP	87	55.450	Macaca_mulatta
ENSELUG00000012854	slbp	54	52.532	ENSMNEG00000008082	SLBP	64	48.101	Macaca_nemestrina
ENSELUG00000012854	slbp	77	57.078	ENSMLEG00000024639	SLBP	82	53.241	Mandrillus_leucophaeus
ENSELUG00000012854	slbp	92	58.238	ENSMAMG00000001046	-	91	58.238	Mastacembelus_armatus
ENSELUG00000012854	slbp	91	60.385	ENSMZEG00005017261	-	93	58.077	Maylandia_zebra
ENSELUG00000012854	slbp	74	56.132	ENSMGAG00000013085	SLBP	93	56.132	Meleagris_gallopavo
ENSELUG00000012854	slbp	99	49.117	ENSMAUG00000009490	Slbp	95	45.936	Mesocricetus_auratus
ENSELUG00000012854	slbp	76	57.009	ENSMICG00000014244	SLBP	84	54.286	Microcebus_murinus
ENSELUG00000012854	slbp	91	49.020	ENSMOCG00000015826	Slbp	88	57.711	Microtus_ochrogaster
ENSELUG00000012854	slbp	92	55.769	ENSMMOG00000010181	slbp	94	55.769	Mola_mola
ENSELUG00000012854	slbp	73	56.098	ENSMODG00000004304	SLBP	88	51.230	Monodelphis_domestica
ENSELUG00000012854	slbp	91	62.934	ENSMALG00000013883	-	67	62.692	Monopterus_albus
ENSELUG00000012854	slbp	92	48.846	MGP_CAROLIEiJ_G0027117	Slbp	86	58.209	Mus_caroli
ENSELUG00000012854	slbp	91	49.412	ENSMUSG00000004642	Slbp	86	58.209	Mus_musculus
ENSELUG00000012854	slbp	91	49.412	MGP_PahariEiJ_G0016901	Slbp	86	58.209	Mus_pahari
ENSELUG00000012854	slbp	91	49.412	MGP_SPRETEiJ_G0028113	Slbp	86	58.209	Mus_spretus
ENSELUG00000012854	slbp	62	55.747	ENSMPUG00000011139	SLBP	81	51.786	Mustela_putorius_furo
ENSELUG00000012854	slbp	58	63.975	ENSMLUG00000004425	SLBP	85	52.885	Myotis_lucifugus
ENSELUG00000012854	slbp	90	48.413	ENSNGAG00000020799	Slbp	84	49.206	Nannospalax_galili
ENSELUG00000012854	slbp	85	62.656	ENSNBRG00000006044	-	91	62.656	Neolamprologus_brichardi
ENSELUG00000012854	slbp	97	49.466	ENSNLEG00000000048	SLBP	89	53.363	Nomascus_leucogenys
ENSELUG00000012854	slbp	56	64.968	ENSMEUG00000002501	SLBP	89	61.635	Notamacropus_eugenii
ENSELUG00000012854	slbp	58	63.580	ENSODEG00000012641	SLBP	86	50.000	Octodon_degus
ENSELUG00000012854	slbp	88	62.400	ENSONIG00000017469	-	89	60.000	Oreochromis_niloticus
ENSELUG00000012854	slbp	75	58.019	ENSOANG00000014243	SLBP	88	58.019	Ornithorhynchus_anatinus
ENSELUG00000012854	slbp	94	57.303	ENSORLG00000024887	-	94	54.682	Oryzias_latipes
ENSELUG00000012854	slbp	100	54.770	ENSORLG00020007798	slbp	100	52.297	Oryzias_latipes_hni
ENSELUG00000012854	slbp	94	56.929	ENSORLG00015016656	slbp	94	54.307	Oryzias_latipes_hsok
ENSELUG00000012854	slbp	92	57.088	ENSOMEG00000010818	slbp	94	53.933	Oryzias_melastigma
ENSELUG00000012854	slbp	76	57.407	ENSOGAG00000009750	SLBP	84	50.781	Otolemur_garnettii
ENSELUG00000012854	slbp	57	67.284	ENSOARG00000016090	SLBP	93	50.472	Ovis_aries
ENSELUG00000012854	slbp	91	52.157	ENSPPAG00000033300	SLBP	89	53.363	Pan_paniscus
ENSELUG00000012854	slbp	76	52.232	ENSPPRG00000016897	SLBP	92	48.000	Panthera_pardus
ENSELUG00000012854	slbp	65	48.901	ENSPTIG00000015057	SLBP	90	48.901	Panthera_tigris_altaica
ENSELUG00000012854	slbp	90	52.174	ENSPTRG00000015832	SLBP	89	53.363	Pan_troglodytes
ENSELUG00000012854	slbp	97	48.936	ENSPANG00000004932	SLBP	84	55.238	Papio_anubis
ENSELUG00000012854	slbp	94	65.660	ENSPKIG00000006183	slbp	95	63.345	Paramormyrops_kingsleyae
ENSELUG00000012854	slbp	81	55.066	ENSPMGG00000017684	-	99	52.423	Periophthalmus_magnuspinnatus
ENSELUG00000012854	slbp	92	49.042	ENSPEMG00000018369	Slbp	87	51.515	Peromyscus_maniculatus_bairdii
ENSELUG00000012854	slbp	73	58.768	ENSPCIG00000013575	SLBP	73	50.190	Phascolarctos_cinereus
ENSELUG00000012854	slbp	97	57.040	ENSPFOG00000000462	slbp	98	57.040	Poecilia_formosa
ENSELUG00000012854	slbp	97	56.679	ENSPLAG00000008300	slbp	98	56.679	Poecilia_latipinna
ENSELUG00000012854	slbp	97	57.040	ENSPMEG00000020807	slbp	98	57.040	Poecilia_mexicana
ENSELUG00000012854	slbp	97	57.401	ENSPREG00000004561	slbp	98	57.401	Poecilia_reticulata
ENSELUG00000012854	slbp	97	50.730	ENSPPYG00000014529	SLBP	89	48.905	Pongo_abelii
ENSELUG00000012854	slbp	76	57.009	ENSPCOG00000017399	SLBP	93	47.653	Propithecus_coquereli
ENSELUG00000012854	slbp	99	44.484	ENSPVAG00000002807	SLBP	94	44.681	Pteropus_vampyrus
ENSELUG00000012854	slbp	91	60.385	ENSPNYG00000005451	-	93	58.077	Pundamilia_nyererei
ENSELUG00000012854	slbp	97	60.215	ENSPNAG00000018503	slbp	98	60.215	Pygocentrus_nattereri
ENSELUG00000012854	slbp	91	49.412	ENSRNOG00000037162	Slbp	85	51.172	Rattus_norvegicus
ENSELUG00000012854	slbp	97	48.936	ENSRBIG00000039159	SLBP	84	55.238	Rhinopithecus_bieti
ENSELUG00000012854	slbp	90	52.756	ENSRROG00000030081	SLBP	86	50.588	Rhinopithecus_roxellana
ENSELUG00000012854	slbp	62	58.427	ENSSBOG00000033897	SLBP	85	54.802	Saimiri_boliviensis_boliviensis
ENSELUG00000012854	slbp	73	56.604	ENSSHAG00000013939	SLBP	85	47.148	Sarcophilus_harrisii
ENSELUG00000012854	slbp	99	59.431	ENSSFOG00015019429	slbp	99	59.431	Scleropages_formosus
ENSELUG00000012854	slbp	96	58.759	ENSSMAG00000016028	-	96	58.759	Scophthalmus_maximus
ENSELUG00000012854	slbp	93	62.030	ENSSDUG00000000855	-	93	62.030	Seriola_dumerili
ENSELUG00000012854	slbp	53	64.238	ENSSLDG00000022893	-	86	64.238	Seriola_lalandi_dorsalis
ENSELUG00000012854	slbp	90	46.275	ENSSLDG00000007554	-	80	44.706	Seriola_lalandi_dorsalis
ENSELUG00000012854	slbp	88	50.202	ENSSPUG00000016007	SLBP	86	51.012	Sphenodon_punctatus
ENSELUG00000012854	slbp	90	62.791	ENSSPAG00000004021	slbp	91	64.854	Stegastes_partitus
ENSELUG00000012854	slbp	99	48.375	ENSSSCG00000008676	SLBP	84	47.619	Sus_scrofa
ENSELUG00000012854	slbp	92	50.385	ENSTGUG00000010626	-	94	50.769	Taeniopygia_guttata
ENSELUG00000012854	slbp	99	57.895	ENSTRUG00000000688	slbp	99	55.789	Takifugu_rubripes
ENSELUG00000012854	slbp	91	55.469	ENSTNIG00000000484	-	99	53.125	Tetraodon_nigroviridis
ENSELUG00000012854	slbp	55	60.656	ENSTBEG00000004085	SLBP	54	60.714	Tupaia_belangeri
ENSELUG00000012854	slbp	56	63.924	ENSTTRG00000004010	-	89	57.233	Tursiops_truncatus
ENSELUG00000012854	slbp	56	68.987	ENSTTRG00000010901	-	87	53.030	Tursiops_truncatus
ENSELUG00000012854	slbp	81	58.079	ENSUAMG00000012990	SLBP	93	48.387	Ursus_americanus
ENSELUG00000012854	slbp	99	48.913	ENSVVUG00000015578	-	84	48.810	Vulpes_vulpes
ENSELUG00000012854	slbp	96	49.627	ENSXETG00000003876	slbp	93	50.566	Xenopus_tropicalis
ENSELUG00000012854	slbp	94	56.716	ENSXCOG00000008275	slbp	100	56.716	Xiphophorus_couchianus
ENSELUG00000012854	slbp	97	57.040	ENSXMAG00000001331	-	97	57.040	Xiphophorus_maculatus