EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000013027 (Gene tree)
Gene ID: 105023241
Gene Symbol: polr1c
Alias: zgc:65973
Full Name: RNA polymerase I and III subunit C
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 4746 bases
Position: chrLG06:7721129-7725874
Accession: 105023241
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000034423	RNA_pol_A_bac	PF01000.26	2.7e-28	1	1
ENSELUP00000034405	RNA_pol_A_bac	PF01000.26	3.8e-26	1	1
ENSELUP00000034405	RNA_pol_L	PF01193.24	2e-23	1	1
ENSELUP00000034423	RNA_pol_L	PF01193.24	3.1e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000021120	-	894	-	ENSELUP00000034405	297 (aa)	-	-
ENSELUT00000038231	-	1636	XM_010892280	ENSELUP00000034423	347 (aa)	XP_010890582	UPI000575F5CB

Gene Model

Click here to download ENSELUG00000013027's gene model file

Pathways

Pathway ID	Pathway Name	Source
els03020	RNA polymerase	KEGG
els04623	Cytosolic DNA-sensing pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000013027's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000013027	polr1c	100	72.046	ENSG00000171453	POLR1C	100	76.613	Homo_sapiens
ENSELUG00000013027	polr1c	100	80.627	ENSAPOG00000024356	polr1c	100	81.197	Acanthochromis_polyacanthus
ENSELUG00000013027	polr1c	99	71.884	ENSAMEG00000012205	POLR1C	99	71.884	Ailuropoda_melanoleuca
ENSELUG00000013027	polr1c	88	72.903	ENSACIG00000016268	polr1c	88	73.548	Amphilophus_citrinellus
ENSELUG00000013027	polr1c	100	78.917	ENSAOCG00000011687	polr1c	97	79.487	Amphiprion_ocellaris
ENSELUG00000013027	polr1c	100	79.772	ENSAPEG00000002433	polr1c	100	80.342	Amphiprion_percula
ENSELUG00000013027	polr1c	99	83.095	ENSATEG00000005985	polr1c	99	83.095	Anabas_testudineus
ENSELUG00000013027	polr1c	86	74.333	ENSAPLG00000002908	POLR1C	100	74.333	Anas_platyrhynchos
ENSELUG00000013027	polr1c	89	72.078	ENSACAG00000009764	POLR1C	88	72.078	Anolis_carolinensis
ENSELUG00000013027	polr1c	100	72.046	ENSANAG00000025805	POLR1C	100	71.717	Aotus_nancymaae
ENSELUG00000013027	polr1c	100	84.175	ENSACLG00000006573	polr1c	100	84.175	Astatotilapia_calliptera
ENSELUG00000013027	polr1c	100	84.438	ENSAMXG00000012062	polr1c	100	84.175	Astyanax_mexicanus
ENSELUG00000013027	polr1c	100	72.911	ENSBTAG00000018969	POLR1C	100	72.911	Bos_taurus
ENSELUG00000013027	polr1c	92	46.765	WBGene00019275	rpac-40	92	46.765	Caenorhabditis_elegans
ENSELUG00000013027	polr1c	81	30.037	WBGene00007971	rpb-3	92	30.037	Caenorhabditis_elegans
ENSELUG00000013027	polr1c	100	72.727	ENSCJAG00000005594	POLR1C	100	72.727	Callithrix_jacchus
ENSELUG00000013027	polr1c	100	72.334	ENSCAFG00000001872	POLR1C	100	72.334	Canis_familiaris
ENSELUG00000013027	polr1c	100	72.334	ENSCAFG00020012018	POLR1C	100	72.334	Canis_lupus_dingo
ENSELUG00000013027	polr1c	100	72.414	ENSCHIG00000004352	POLR1C	100	72.414	Capra_hircus
ENSELUG00000013027	polr1c	100	72.334	ENSTSYG00000011921	POLR1C	100	72.334	Carlito_syrichta
ENSELUG00000013027	polr1c	86	74.582	ENSCAPG00000015364	POLR1C	88	74.582	Cavia_aperea
ENSELUG00000013027	polr1c	100	73.487	ENSCPOG00000038098	POLR1C	100	73.487	Cavia_porcellus
ENSELUG00000013027	polr1c	100	72.334	ENSCCAG00000020169	POLR1C	100	72.334	Cebus_capucinus
ENSELUG00000013027	polr1c	100	72.046	ENSCATG00000044045	POLR1C	100	72.046	Cercocebus_atys
ENSELUG00000013027	polr1c	100	73.775	ENSCLAG00000009266	POLR1C	100	73.775	Chinchilla_lanigera
ENSELUG00000013027	polr1c	60	30.137	ENSCLAG00000013676	POLR2C	52	30.137	Chinchilla_lanigera
ENSELUG00000013027	polr1c	100	71.470	ENSCSAG00000011913	POLR1C	100	71.470	Chlorocebus_sabaeus
ENSELUG00000013027	polr1c	61	68.396	ENSCHOG00000006601	POLR1C	100	68.396	Choloepus_hoffmanni
ENSELUG00000013027	polr1c	99	75.652	ENSCPBG00000025203	POLR1C	99	75.652	Chrysemys_picta_bellii
ENSELUG00000013027	polr1c	99	56.105	ENSCING00000003563	-	99	56.105	Ciona_intestinalis
ENSELUG00000013027	polr1c	100	71.758	ENSCANG00000043167	POLR1C	100	71.758	Colobus_angolensis_palliatus
ENSELUG00000013027	polr1c	100	71.758	ENSCGRG00001017533	Polr1c	100	71.758	Cricetulus_griseus_chok1gshd
ENSELUG00000013027	polr1c	86	73.244	ENSCGRG00000013225	Polr1c	100	73.244	Cricetulus_griseus_crigri
ENSELUG00000013027	polr1c	100	80.403	ENSCSEG00000018097	polr1c	100	80.403	Cynoglossus_semilaevis
ENSELUG00000013027	polr1c	61	81.604	ENSCVAG00000005684	polr1c	88	80.000	Cyprinodon_variegatus
ENSELUG00000013027	polr1c	100	82.421	ENSDARG00000039400	polr1c	96	82.421	Danio_rerio
ENSELUG00000013027	polr1c	100	72.911	ENSDNOG00000042693	POLR1C	100	72.911	Dasypus_novemcinctus
ENSELUG00000013027	polr1c	100	73.199	ENSDORG00000000429	Polr1c	100	73.199	Dipodomys_ordii
ENSELUG00000013027	polr1c	90	52.229	FBgn0031657	CG3756	93	52.229	Drosophila_melanogaster
ENSELUG00000013027	polr1c	99	68.696	ENSETEG00000010807	POLR1C	99	68.696	Echinops_telfairi
ENSELUG00000013027	polr1c	98	67.941	ENSEBUG00000013725	polr1c	98	67.941	Eptatretus_burgeri
ENSELUG00000013027	polr1c	100	71.758	ENSEASG00005003338	POLR1C	100	71.758	Equus_asinus_asinus
ENSELUG00000013027	polr1c	100	71.758	ENSECAG00000023516	POLR1C	100	71.717	Equus_caballus
ENSELUG00000013027	polr1c	99	73.913	ENSEEUG00000005471	POLR1C	99	73.913	Erinaceus_europaeus
ENSELUG00000013027	polr1c	100	72.054	ENSFCAG00000009735	POLR1C	100	72.054	Felis_catus
ENSELUG00000013027	polr1c	93	73.994	ENSFALG00000012111	POLR1C	100	73.994	Ficedula_albicollis
ENSELUG00000013027	polr1c	100	72.911	ENSFDAG00000008428	POLR1C	100	72.911	Fukomys_damarensis
ENSELUG00000013027	polr1c	100	81.818	ENSFHEG00000000262	polr1c	100	81.818	Fundulus_heteroclitus
ENSELUG00000013027	polr1c	63	71.728	ENSFHEG00000013867	-	93	71.728	Fundulus_heteroclitus
ENSELUG00000013027	polr1c	93	83.333	ENSGMOG00000013878	polr1c	100	83.333	Gadus_morhua
ENSELUG00000013027	polr1c	100	74.063	ENSGALG00000010349	POLR1C	100	74.063	Gallus_gallus
ENSELUG00000013027	polr1c	100	79.487	ENSGAFG00000010153	polr1c	100	79.772	Gambusia_affinis
ENSELUG00000013027	polr1c	100	80.627	ENSGACG00000002453	polr1c	100	81.481	Gasterosteus_aculeatus
ENSELUG00000013027	polr1c	99	74.854	ENSGAGG00000010640	POLR1C	99	74.854	Gopherus_agassizii
ENSELUG00000013027	polr1c	100	72.046	ENSGGOG00000010903	POLR1C	100	72.046	Gorilla_gorilla
ENSELUG00000013027	polr1c	100	75.793	ENSHBUG00000017816	polr1c	100	75.793	Haplochromis_burtoni
ENSELUG00000013027	polr1c	100	72.622	ENSHGLG00000019441	POLR1C	100	72.692	Heterocephalus_glaber_female
ENSELUG00000013027	polr1c	100	72.911	ENSHGLG00100005970	POLR1C	100	72.911	Heterocephalus_glaber_male
ENSELUG00000013027	polr1c	99	77.364	ENSHCOG00000002179	polr1c	99	77.364	Hippocampus_comes
ENSELUG00000013027	polr1c	100	85.345	ENSIPUG00000024464	polr1c	100	85.345	Ictalurus_punctatus
ENSELUG00000013027	polr1c	100	72.334	ENSSTOG00000010631	POLR1C	100	72.334	Ictidomys_tridecemlineatus
ENSELUG00000013027	polr1c	60	30.137	ENSSTOG00000015150	-	50	30.137	Ictidomys_tridecemlineatus
ENSELUG00000013027	polr1c	100	72.622	ENSJJAG00000023110	Polr1c	100	72.622	Jaculus_jaculus
ENSELUG00000013027	polr1c	100	79.798	ENSKMAG00000014305	polr1c	100	79.798	Kryptolebias_marmoratus
ENSELUG00000013027	polr1c	100	82.621	ENSLBEG00000014925	polr1c	100	83.191	Labrus_bergylta
ENSELUG00000013027	polr1c	95	58.610	ENSLACG00000012567	POLR1C	98	58.610	Latimeria_chalumnae
ENSELUG00000013027	polr1c	100	80.115	ENSLOCG00000016710	polr1c	96	80.115	Lepisosteus_oculatus
ENSELUG00000013027	polr1c	86	73.422	ENSLAFG00000026248	POLR1C	100	73.422	Loxodonta_africana
ENSELUG00000013027	polr1c	60	30.137	ENSLAFG00000027230	POLR2C	74	30.137	Loxodonta_africana
ENSELUG00000013027	polr1c	100	71.758	ENSMFAG00000046295	POLR1C	100	71.758	Macaca_fascicularis
ENSELUG00000013027	polr1c	100	71.758	ENSMMUG00000015192	POLR1C	100	71.758	Macaca_mulatta
ENSELUG00000013027	polr1c	100	71.758	ENSMNEG00000028073	POLR1C	100	71.758	Macaca_nemestrina
ENSELUG00000013027	polr1c	100	71.758	ENSMLEG00000034818	POLR1C	100	71.758	Mandrillus_leucophaeus
ENSELUG00000013027	polr1c	100	83.502	ENSMAMG00000008700	polr1c	100	83.502	Mastacembelus_armatus
ENSELUG00000013027	polr1c	100	83.838	ENSMZEG00005018545	polr1c	100	83.838	Maylandia_zebra
ENSELUG00000013027	polr1c	84	71.134	ENSMGAG00000011020	POLR1C	100	71.134	Meleagris_gallopavo
ENSELUG00000013027	polr1c	100	72.334	ENSMAUG00000014329	Polr1c	100	72.334	Mesocricetus_auratus
ENSELUG00000013027	polr1c	100	71.758	ENSMICG00000005027	POLR1C	100	71.758	Microcebus_murinus
ENSELUG00000013027	polr1c	100	72.622	ENSMOCG00000017549	Polr1c	100	72.622	Microtus_ochrogaster
ENSELUG00000013027	polr1c	100	79.798	ENSMMOG00000005380	polr1c	100	79.798	Mola_mola
ENSELUG00000013027	polr1c	84	74.914	ENSMODG00000018964	POLR1C	100	74.914	Monodelphis_domestica
ENSELUG00000013027	polr1c	100	85.185	ENSMALG00000011711	polr1c	100	85.185	Monopterus_albus
ENSELUG00000013027	polr1c	100	63.977	MGP_CAROLIEiJ_G0021662	Polr1c	100	72.692	Mus_caroli
ENSELUG00000013027	polr1c	60	30.594	ENSMUSG00000031783	Polr2c	55	34.409	Mus_musculus
ENSELUG00000013027	polr1c	100	73.199	ENSMUSG00000067148	Polr1c	99	74.757	Mus_musculus
ENSELUG00000013027	polr1c	100	73.199	MGP_PahariEiJ_G0020654	Polr1c	100	73.462	Mus_pahari
ENSELUG00000013027	polr1c	100	73.199	MGP_SPRETEiJ_G0022574	Polr1c	99	74.757	Mus_spretus
ENSELUG00000013027	polr1c	100	72.046	ENSMPUG00000012916	POLR1C	91	72.046	Mustela_putorius_furo
ENSELUG00000013027	polr1c	100	72.622	ENSMLUG00000017751	POLR1C	99	72.622	Myotis_lucifugus
ENSELUG00000013027	polr1c	100	72.046	ENSNGAG00000023487	Polr1c	100	73.540	Nannospalax_galili
ENSELUG00000013027	polr1c	100	83.838	ENSNBRG00000018742	polr1c	100	83.838	Neolamprologus_brichardi
ENSELUG00000013027	polr1c	100	72.046	ENSNLEG00000004035	POLR1C	100	72.046	Nomascus_leucogenys
ENSELUG00000013027	polr1c	100	63.112	ENSMEUG00000006778	POLR1C	100	63.112	Notamacropus_eugenii
ENSELUG00000013027	polr1c	77	71.429	ENSOPRG00000000145	POLR1C	99	71.429	Ochotona_princeps
ENSELUG00000013027	polr1c	63	72.603	ENSODEG00000017109	-	100	72.603	Octodon_degus
ENSELUG00000013027	polr1c	100	74.063	ENSODEG00000015831	-	100	74.063	Octodon_degus
ENSELUG00000013027	polr1c	100	82.336	ENSONIG00000013133	polr1c	98	82.906	Oreochromis_niloticus
ENSELUG00000013027	polr1c	99	71.594	ENSOANG00000003043	POLR1C	99	71.594	Ornithorhynchus_anatinus
ENSELUG00000013027	polr1c	100	71.470	ENSOCUG00000005504	POLR1C	99	71.470	Oryctolagus_cuniculus
ENSELUG00000013027	polr1c	99	77.299	ENSORLG00000019743	polr1c	99	77.299	Oryzias_latipes
ENSELUG00000013027	polr1c	99	78.161	ENSORLG00020006489	POLR1C	99	78.161	Oryzias_latipes_hni
ENSELUG00000013027	polr1c	78	60.993	ENSORLG00020005555	polr1c	83	60.993	Oryzias_latipes_hni
ENSELUG00000013027	polr1c	99	77.586	ENSORLG00015013322	polr1c	99	77.586	Oryzias_latipes_hsok
ENSELUG00000013027	polr1c	99	77.874	ENSOMEG00000016527	polr1c	99	77.874	Oryzias_melastigma
ENSELUG00000013027	polr1c	99	71.758	ENSOGAG00000016318	POLR1C	99	71.758	Otolemur_garnettii
ENSELUG00000013027	polr1c	100	72.622	ENSOARG00000007503	POLR1C	100	72.622	Ovis_aries
ENSELUG00000013027	polr1c	100	72.046	ENSPPAG00000043678	POLR1C	100	72.046	Pan_paniscus
ENSELUG00000013027	polr1c	100	72.054	ENSPPRG00000009760	POLR1C	100	72.054	Panthera_pardus
ENSELUG00000013027	polr1c	100	72.054	ENSPTIG00000014813	POLR1C	100	72.054	Panthera_tigris_altaica
ENSELUG00000013027	polr1c	100	72.046	ENSPTRG00000018202	POLR1C	100	72.046	Pan_troglodytes
ENSELUG00000013027	polr1c	100	72.046	ENSPANG00000009025	POLR1C	100	71.717	Papio_anubis
ENSELUG00000013027	polr1c	100	81.844	ENSPKIG00000009858	polr1c	100	81.844	Paramormyrops_kingsleyae
ENSELUG00000013027	polr1c	99	75.072	ENSPSIG00000012580	POLR1C	94	75.072	Pelodiscus_sinensis
ENSELUG00000013027	polr1c	100	81.818	ENSPMGG00000012121	polr1c	100	81.818	Periophthalmus_magnuspinnatus
ENSELUG00000013027	polr1c	100	71.758	ENSPEMG00000006970	Polr1c	100	71.758	Peromyscus_maniculatus_bairdii
ENSELUG00000013027	polr1c	59	30.220	ENSPMAG00000004827	polr2c	73	30.220	Petromyzon_marinus
ENSELUG00000013027	polr1c	99	70.115	ENSPMAG00000005560	polr1c	99	70.115	Petromyzon_marinus
ENSELUG00000013027	polr1c	100	73.737	ENSPCIG00000028137	POLR1C	100	73.737	Phascolarctos_cinereus
ENSELUG00000013027	polr1c	100	79.487	ENSPFOG00000014342	POLR1C	100	79.772	Poecilia_formosa
ENSELUG00000013027	polr1c	100	79.487	ENSPFOG00000014357	polr1c	98	79.772	Poecilia_formosa
ENSELUG00000013027	polr1c	61	80.189	ENSPLAG00000004111	polr1c	99	74.059	Poecilia_latipinna
ENSELUG00000013027	polr1c	100	80.135	ENSPMEG00000008420	polr1c	100	80.135	Poecilia_mexicana
ENSELUG00000013027	polr1c	100	80.135	ENSPMEG00000011877	-	100	80.135	Poecilia_mexicana
ENSELUG00000013027	polr1c	100	80.692	ENSPREG00000007985	polr1c	100	80.692	Poecilia_reticulata
ENSELUG00000013027	polr1c	100	72.046	ENSPPYG00000016645	POLR1C	100	72.046	Pongo_abelii
ENSELUG00000013027	polr1c	100	72.334	ENSPCOG00000024628	POLR1C	100	72.334	Propithecus_coquereli
ENSELUG00000013027	polr1c	100	66.282	ENSPVAG00000005689	POLR1C	100	66.282	Pteropus_vampyrus
ENSELUG00000013027	polr1c	100	81.870	ENSPNYG00000003620	polr1c	100	82.336	Pundamilia_nyererei
ENSELUG00000013027	polr1c	100	85.879	ENSPNAG00000008443	polr1c	100	85.879	Pygocentrus_nattereri
ENSELUG00000013027	polr1c	100	72.046	ENSRNOG00000019079	Polr1c	100	72.046	Rattus_norvegicus
ENSELUG00000013027	polr1c	100	71.758	ENSRBIG00000007155	POLR1C	100	71.758	Rhinopithecus_bieti
ENSELUG00000013027	polr1c	100	72.054	ENSRROG00000000257	POLR1C	100	72.054	Rhinopithecus_roxellana
ENSELUG00000013027	polr1c	92	48.000	YPR110C	RPC40	96	48.000	Saccharomyces_cerevisiae
ENSELUG00000013027	polr1c	100	72.334	ENSSBOG00000025735	POLR1C	100	72.054	Saimiri_boliviensis_boliviensis
ENSELUG00000013027	polr1c	100	65.537	ENSSHAG00000014456	POLR1C	100	65.537	Sarcophilus_harrisii
ENSELUG00000013027	polr1c	100	84.726	ENSSFOG00015019860	polr1c	100	84.726	Scleropages_formosus
ENSELUG00000013027	polr1c	100	83.862	ENSSMAG00000018865	polr1c	100	83.862	Scophthalmus_maximus
ENSELUG00000013027	polr1c	100	85.522	ENSSDUG00000015745	polr1c	100	85.522	Seriola_dumerili
ENSELUG00000013027	polr1c	100	85.185	ENSSLDG00000018285	polr1c	100	85.185	Seriola_lalandi_dorsalis
ENSELUG00000013027	polr1c	98	71.261	ENSSPUG00000011822	POLR1C	99	71.261	Sphenodon_punctatus
ENSELUG00000013027	polr1c	100	80.342	ENSSPAG00000022369	polr1c	100	80.912	Stegastes_partitus
ENSELUG00000013027	polr1c	100	72.334	ENSSSCG00000028007	POLR1C	99	72.876	Sus_scrofa
ENSELUG00000013027	polr1c	96	74.398	ENSTGUG00000009159	POLR1C	99	74.398	Taeniopygia_guttata
ENSELUG00000013027	polr1c	100	78.523	ENSTRUG00000006264	polr1c	100	78.523	Takifugu_rubripes
ENSELUG00000013027	polr1c	51	71.348	ENSTBEG00000002254	POLR1C	100	71.348	Tupaia_belangeri
ENSELUG00000013027	polr1c	76	71.483	ENSTTRG00000006344	POLR1C	76	71.483	Tursiops_truncatus
ENSELUG00000013027	polr1c	100	72.334	ENSUAMG00000025602	POLR1C	100	72.334	Ursus_americanus
ENSELUG00000013027	polr1c	100	72.334	ENSUMAG00000005938	POLR1C	100	72.334	Ursus_maritimus
ENSELUG00000013027	polr1c	100	72.391	ENSVVUG00000028922	POLR1C	100	72.391	Vulpes_vulpes
ENSELUG00000013027	polr1c	99	69.364	ENSXETG00000010882	polr1c	99	69.364	Xenopus_tropicalis
ENSELUG00000013027	polr1c	100	80.460	ENSXCOG00000014185	polr1c	100	80.460	Xiphophorus_couchianus
ENSELUG00000013027	polr1c	100	79.772	ENSXMAG00000015076	polr1c	100	80.057	Xiphophorus_maculatus