EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000013096 (Gene tree)
Gene ID: -
Gene Symbol: rbfox1
Alias: a2bp1|zgc:103635
Full Name: RNA binding fox-1 homolog 1
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 58054 bases
Position: chrLG11:1761936-1819989
Accession: ZDB-GENE-040927-11
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000012894	Fox-1_C	PF12414.8	1.5e-11	1	1
ENSELUP00000012894	RRM_1	PF00076.22	1.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000038289	-	846	-	ENSELUP00000012894	281 (aa)	-	-

Gene Model

Click here to download ENSELUG00000013096's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000013096's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000013096	rbfox1	99	58.879	ENSELUG00000017963	rbfox3b	100	46.290
ENSELUG00000013096	rbfox1	66	47.273	ENSELUG00000000102	rbfox2	90	46.429
ENSELUG00000013096	rbfox1	66	43.348	ENSELUG00000015077	rbfox1l	54	43.777
ENSELUG00000013096	rbfox1	66	50.206	ENSELUG00000009404	-	50	51.397

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000013096	rbfox1	100	53.495	ENSG00000078328	RBFOX1	83	73.832	Homo_sapiens
ENSELUG00000013096	rbfox1	66	75.701	ENSAPOG00000003197	rbfox1	100	56.701	Acanthochromis_polyacanthus
ENSELUG00000013096	rbfox1	56	91.549	ENSAMEG00000008605	RBFOX1	65	91.549	Ailuropoda_melanoleuca
ENSELUG00000013096	rbfox1	93	58.772	ENSAPEG00000010636	rbfox1	100	59.942	Amphiprion_percula
ENSELUG00000013096	rbfox1	96	71.084	ENSAPLG00000013263	RBFOX1	81	71.084	Anas_platyrhynchos
ENSELUG00000013096	rbfox1	97	68.605	ENSACAG00000004013	RBFOX1	82	68.605	Anolis_carolinensis
ENSELUG00000013096	rbfox1	100	52.785	ENSANAG00000029527	RBFOX1	100	53.581	Aotus_nancymaae
ENSELUG00000013096	rbfox1	97	68.605	ENSBTAG00000007210	RBFOX1	82	68.605	Bos_taurus
ENSELUG00000013096	rbfox1	100	52.910	ENSCJAG00000017351	RBFOX1	80	74.419	Callithrix_jacchus
ENSELUG00000013096	rbfox1	99	64.876	ENSCAFG00000019082	RBFOX1	81	66.116	Canis_familiaris
ENSELUG00000013096	rbfox1	97	68.605	ENSCHIG00000023549	RBFOX1	82	68.605	Capra_hircus
ENSELUG00000013096	rbfox1	97	55.096	ENSTSYG00000005334	RBFOX1	100	55.923	Carlito_syrichta
ENSELUG00000013096	rbfox1	96	69.412	ENSCAPG00000017669	RBFOX1	84	69.412	Cavia_aperea
ENSELUG00000013096	rbfox1	97	67.816	ENSCPOG00000011314	RBFOX1	83	67.816	Cavia_porcellus
ENSELUG00000013096	rbfox1	100	52.785	ENSCCAG00000023031	RBFOX1	100	53.581	Cebus_capucinus
ENSELUG00000013096	rbfox1	100	52.520	ENSCATG00000033816	RBFOX1	83	73.832	Cercocebus_atys
ENSELUG00000013096	rbfox1	99	50.378	ENSCLAG00000012761	RBFOX1	98	50.765	Chinchilla_lanigera
ENSELUG00000013096	rbfox1	77	41.742	ENSCSAG00000008739	RBFOX1	71	69.767	Chlorocebus_sabaeus
ENSELUG00000013096	rbfox1	97	73.832	ENSCPBG00000026626	RBFOX1	82	68.605	Chrysemys_picta_bellii
ENSELUG00000013096	rbfox1	100	52.520	ENSCANG00000033125	RBFOX1	83	73.832	Colobus_angolensis_palliatus
ENSELUG00000013096	rbfox1	100	52.393	ENSCGRG00001013729	Rbfox1	84	66.390	Cricetulus_griseus_chok1gshd
ENSELUG00000013096	rbfox1	100	52.393	ENSCGRG00000003272	Rbfox1	84	66.390	Cricetulus_griseus_crigri
ENSELUG00000013096	rbfox1	66	70.698	ENSCSEG00000008840	rbfox1	58	70.233	Cynoglossus_semilaevis
ENSELUG00000013096	rbfox1	99	74.419	ENSDARG00000014746	rbfox1	100	58.602	Danio_rerio
ENSELUG00000013096	rbfox1	98	71.591	ENSDNOG00000043612	RBFOX1	79	71.591	Dasypus_novemcinctus
ENSELUG00000013096	rbfox1	98	64.835	ENSDORG00000010024	Rbfox1	81	65.975	Dipodomys_ordii
ENSELUG00000013096	rbfox1	99	64.876	ENSETEG00000003771	RBFOX1	81	64.050	Echinops_telfairi
ENSELUG00000013096	rbfox1	97	69.767	ENSEASG00005011599	RBFOX1	82	69.767	Equus_asinus_asinus
ENSELUG00000013096	rbfox1	97	69.767	ENSECAG00000012667	RBFOX1	75	69.767	Equus_caballus
ENSELUG00000013096	rbfox1	97	69.767	ENSFCAG00000025322	RBFOX1	73	74.766	Felis_catus
ENSELUG00000013096	rbfox1	73	69.767	ENSFALG00000004027	RBFOX1	74	69.767	Ficedula_albicollis
ENSELUG00000013096	rbfox1	99	64.894	ENSFDAG00000007388	RBFOX1	84	65.560	Fukomys_damarensis
ENSELUG00000013096	rbfox1	99	65.289	ENSGALG00000034325	RBFOX1	81	65.702	Gallus_gallus
ENSELUG00000013096	rbfox1	97	73.488	ENSGAGG00000023681	RBFOX1	83	68.919	Gopherus_agassizii
ENSELUG00000013096	rbfox1	100	52.520	ENSGGOG00000016871	-	83	73.832	Gorilla_gorilla
ENSELUG00000013096	rbfox1	99	68.478	ENSHGLG00000016944	RBFOX1	82	70.930	Heterocephalus_glaber_female
ENSELUG00000013096	rbfox1	99	68.478	ENSHGLG00100003272	RBFOX1	82	70.930	Heterocephalus_glaber_male
ENSELUG00000013096	rbfox1	78	72.515	ENSHCOG00000016419	rbfox1	72	71.930	Hippocampus_comes
ENSELUG00000013096	rbfox1	99	82.234	ENSIPUG00000015215	rbfox1	79	81.726	Ictalurus_punctatus
ENSELUG00000013096	rbfox1	98	69.318	ENSSTOG00000000322	RBFOX1	84	66.390	Ictidomys_tridecemlineatus
ENSELUG00000013096	rbfox1	100	50.630	ENSJJAG00000002575	Rbfox1	100	52.577	Jaculus_jaculus
ENSELUG00000013096	rbfox1	66	73.991	ENSLBEG00000014659	rbfox1	100	56.995	Labrus_bergylta
ENSELUG00000013096	rbfox1	97	70.115	ENSLOCG00000006675	rbfox1	83	70.115	Lepisosteus_oculatus
ENSELUG00000013096	rbfox1	66	64.463	ENSLAFG00000011480	RBFOX1	79	65.702	Loxodonta_africana
ENSELUG00000013096	rbfox1	99	64.050	ENSMFAG00000036447	RBFOX1	83	73.832	Macaca_fascicularis
ENSELUG00000013096	rbfox1	99	64.050	ENSMMUG00000003458	RBFOX1	83	73.832	Macaca_mulatta
ENSELUG00000013096	rbfox1	99	64.050	ENSMNEG00000032034	RBFOX1	81	65.289	Macaca_nemestrina
ENSELUG00000013096	rbfox1	100	52.520	ENSMLEG00000015382	RBFOX1	83	73.832	Mandrillus_leucophaeus
ENSELUG00000013096	rbfox1	66	80.198	ENSMAMG00000003142	rbfox1	59	74.299	Mastacembelus_armatus
ENSELUG00000013096	rbfox1	65	71.084	ENSMGAG00000008606	RBFOX1	73	71.084	Meleagris_gallopavo
ENSELUG00000013096	rbfox1	94	53.401	ENSMAUG00000020570	Rbfox1	95	53.401	Mesocricetus_auratus
ENSELUG00000013096	rbfox1	100	53.316	ENSMICG00000034286	RBFOX1	100	54.111	Microcebus_murinus
ENSELUG00000013096	rbfox1	99	65.145	ENSMOCG00000020932	Rbfox1	83	68.831	Microtus_ochrogaster
ENSELUG00000013096	rbfox1	72	68.919	ENSMODG00000005826	RBFOX1	72	68.919	Monodelphis_domestica
ENSELUG00000013096	rbfox1	66	72.430	ENSMALG00000003337	rbfox1	56	73.364	Monopterus_albus
ENSELUG00000013096	rbfox1	100	52.393	MGP_CAROLIEiJ_G0020427	Rbfox1	84	66.390	Mus_caroli
ENSELUG00000013096	rbfox1	100	52.393	ENSMUSG00000008658	Rbfox1	96	72.656	Mus_musculus
ENSELUG00000013096	rbfox1	100	52.393	MGP_PahariEiJ_G0016135	Rbfox1	84	66.390	Mus_pahari
ENSELUG00000013096	rbfox1	100	51.768	MGP_SPRETEiJ_G0021321	Rbfox1	84	66.390	Mus_spretus
ENSELUG00000013096	rbfox1	79	62.626	ENSMPUG00000014822	RBFOX1	71	62.626	Mustela_putorius_furo
ENSELUG00000013096	rbfox1	66	64.730	ENSMLUG00000015896	RBFOX1	79	65.975	Myotis_lucifugus
ENSELUG00000013096	rbfox1	96	69.412	ENSNGAG00000023276	Rbfox1	84	69.412	Nannospalax_galili
ENSELUG00000013096	rbfox1	96	58.898	ENSNBRG00000011084	rbfox1	79	58.475	Neolamprologus_brichardi
ENSELUG00000013096	rbfox1	99	72.430	ENSNLEG00000010017	-	83	73.832	Nomascus_leucogenys
ENSELUG00000013096	rbfox1	81	92.308	ENSMEUG00000012525	RBFOX1	56	92.308	Notamacropus_eugenii
ENSELUG00000013096	rbfox1	90	91.429	ENSOPRG00000006199	-	61	91.429	Ochotona_princeps
ENSELUG00000013096	rbfox1	100	49.373	ENSODEG00000013166	RBFOX1	84	65.560	Octodon_degus
ENSELUG00000013096	rbfox1	76	68.605	ENSOANG00000002379	RBFOX1	71	68.605	Ornithorhynchus_anatinus
ENSELUG00000013096	rbfox1	58	91.304	ENSOCUG00000001205	-	72	91.304	Oryctolagus_cuniculus
ENSELUG00000013096	rbfox1	98	50.510	ENSOGAG00000025535	RBFOX1	98	50.765	Otolemur_garnettii
ENSELUG00000013096	rbfox1	58	56.311	ENSOARG00000005135	RBFOX1	88	56.311	Ovis_aries
ENSELUG00000013096	rbfox1	97	54.270	ENSPPAG00000036238	-	100	54.545	Pan_paniscus
ENSELUG00000013096	rbfox1	99	64.876	ENSPPRG00000006546	RBFOX1	83	74.766	Panthera_pardus
ENSELUG00000013096	rbfox1	97	52.446	ENSPTIG00000021154	RBFOX1	99	53.261	Panthera_tigris_altaica
ENSELUG00000013096	rbfox1	100	52.520	ENSPTRG00000007744	RBFOX1	83	73.832	Pan_troglodytes
ENSELUG00000013096	rbfox1	100	52.520	ENSPANG00000026500	RBFOX1	83	73.832	Papio_anubis
ENSELUG00000013096	rbfox1	67	80.198	ENSPKIG00000019353	rbfox1	62	78.641	Paramormyrops_kingsleyae
ENSELUG00000013096	rbfox1	100	56.452	ENSPKIG00000009667	-	95	56.012	Paramormyrops_kingsleyae
ENSELUG00000013096	rbfox1	97	68.605	ENSPSIG00000006523	RBFOX1	82	68.605	Pelodiscus_sinensis
ENSELUG00000013096	rbfox1	100	52.393	ENSPEMG00000017607	Rbfox1	84	66.390	Peromyscus_maniculatus_bairdii
ENSELUG00000013096	rbfox1	66	67.234	ENSPCIG00000026887	RBFOX1	83	67.660	Phascolarctos_cinereus
ENSELUG00000013096	rbfox1	79	62.626	ENSPPYG00000007079	-	71	62.626	Pongo_abelii
ENSELUG00000013096	rbfox1	73	62.500	ENSPCAG00000002630	RBFOX1	70	62.500	Procavia_capensis
ENSELUG00000013096	rbfox1	100	53.316	ENSPCOG00000025687	RBFOX1	100	54.111	Propithecus_coquereli
ENSELUG00000013096	rbfox1	99	63.636	ENSPVAG00000013467	RBFOX1	81	63.636	Pteropus_vampyrus
ENSELUG00000013096	rbfox1	92	75.234	ENSPNAG00000023109	rbfox1	77	75.701	Pygocentrus_nattereri
ENSELUG00000013096	rbfox1	100	51.741	ENSRNOG00000002827	Rbfox1	81	65.975	Rattus_norvegicus
ENSELUG00000013096	rbfox1	97	54.270	ENSRBIG00000044478	RBFOX1	100	54.545	Rhinopithecus_bieti
ENSELUG00000013096	rbfox1	100	52.520	ENSRROG00000044411	RBFOX1	83	73.832	Rhinopithecus_roxellana
ENSELUG00000013096	rbfox1	100	53.581	ENSSBOG00000033726	RBFOX1	100	53.846	Saimiri_boliviensis_boliviensis
ENSELUG00000013096	rbfox1	99	65.975	ENSSHAG00000009257	RBFOX1	84	66.390	Sarcophilus_harrisii
ENSELUG00000013096	rbfox1	97	77.128	ENSSFOG00015023675	rbfox1	79	77.660	Scleropages_formosus
ENSELUG00000013096	rbfox1	73	71.098	ENSSFOG00015009955	-	58	70.520	Scleropages_formosus
ENSELUG00000013096	rbfox1	83	57.500	ENSSMAG00000015505	rbfox1	80	56.875	Scophthalmus_maximus
ENSELUG00000013096	rbfox1	66	82.234	ENSSDUG00000016413	rbfox1	56	83.249	Seriola_dumerili
ENSELUG00000013096	rbfox1	57	91.304	ENSSARG00000004936	-	66	91.304	Sorex_araneus
ENSELUG00000013096	rbfox1	78	71.176	ENSSPUG00000009732	RBFOX1	68	70.833	Sphenodon_punctatus
ENSELUG00000013096	rbfox1	66	82.234	ENSSPAG00000009723	rbfox1	98	60.997	Stegastes_partitus
ENSELUG00000013096	rbfox1	95	62.281	ENSSSCG00000007917	RBFOX1	79	63.596	Sus_scrofa
ENSELUG00000013096	rbfox1	97	69.767	ENSTGUG00000004562	RBFOX1	84	69.767	Taeniopygia_guttata
ENSELUG00000013096	rbfox1	66	74.648	ENSTRUG00000020940	rbfox1	56	75.117	Takifugu_rubripes
ENSELUG00000013096	rbfox1	99	64.050	ENSTTRG00000005700	RBFOX1	81	65.289	Tursiops_truncatus
ENSELUG00000013096	rbfox1	94	70.130	ENSUAMG00000024633	RBFOX1	82	70.423	Ursus_americanus
ENSELUG00000013096	rbfox1	94	70.130	ENSUMAG00000003579	RBFOX1	78	71.154	Ursus_maritimus
ENSELUG00000013096	rbfox1	66	64.050	ENSVPAG00000001284	RBFOX1	58	65.289	Vicugna_pacos
ENSELUG00000013096	rbfox1	87	91.429	ENSVVUG00000017311	RBFOX1	64	91.429	Vulpes_vulpes