EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSELUG00000013143 (Gene tree)
Gene ID: 105021545
Gene Symbol: -
Alias: -
Full Name: tripartite motif-containing protein 16-like
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 15457 bases
Position: chrLG09:4184101-4199557
Accession: 105021545
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000012955	zf-C2H2	PF00096.26	2e-42	1	7
ENSELUP00000012955	zf-C2H2	PF00096.26	2e-42	2	7
ENSELUP00000012955	zf-C2H2	PF00096.26	2e-42	3	7
ENSELUP00000012955	zf-C2H2	PF00096.26	2e-42	4	7
ENSELUP00000012955	zf-C2H2	PF00096.26	2e-42	5	7
ENSELUP00000012955	zf-C2H2	PF00096.26	2e-42	6	7
ENSELUP00000012955	zf-C2H2	PF00096.26	2e-42	7	7
ENSELUP00000034526	zf-C2H2	PF00096.26	2.7e-29	1	6
ENSELUP00000034526	zf-C2H2	PF00096.26	2.7e-29	2	6
ENSELUP00000034526	zf-C2H2	PF00096.26	2.7e-29	3	6
ENSELUP00000034526	zf-C2H2	PF00096.26	2.7e-29	4	6
ENSELUP00000034526	zf-C2H2	PF00096.26	2.7e-29	5	6
ENSELUP00000034526	zf-C2H2	PF00096.26	2.7e-29	6	6
ENSELUP00000012955	zf-met	PF12874.7	1.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000021375	-	1515	-	ENSELUP00000012955	504 (aa)	-	-
ENSELUT00000021364	-	2875	-	ENSELUP00000034526	806 (aa)	-	-
ENSELUT00000038308	-	2951	XM_010889302	ENSELUP00000034523	560 (aa)	XP_010887604	UPI000576E8E3

Gene Model

Click here to download ENSELUG00000013143's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000013143's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000013143	-	75	47.222	ENSELUG00000022942	-	90	46.914
ENSELUG00000013143	-	58	49.327	ENSELUG00000013245	-	98	49.327
ENSELUG00000013143	-	51	44.538	ENSELUG00000006058	-	79	43.158
ENSELUG00000013143	-	52	39.487	ENSELUG00000017783	-	77	38.278
ENSELUG00000013143	-	50	48.235	ENSELUG00000021229	-	86	48.235
ENSELUG00000013143	-	52	53.241	ENSELUG00000012597	-	99	50.806
ENSELUG00000013143	-	60	41.060	ENSELUG00000013796	-	72	41.060
ENSELUG00000013143	-	76	34.509	ENSELUG00000008171	-	88	45.985
ENSELUG00000013143	-	75	45.000	ENSELUG00000021525	-	91	44.509
ENSELUG00000013143	-	71	36.036	ENSELUG00000021560	-	92	38.974
ENSELUG00000013143	-	61	43.448	ENSELUG00000019277	zbtb14	51	40.800
ENSELUG00000013143	-	70	36.257	ENSELUG00000024006	-	94	50.000
ENSELUG00000013143	-	77	58.929	ENSELUG00000000423	-	93	58.929
ENSELUG00000013143	-	76	42.991	ENSELUG00000005912	-	99	42.991
ENSELUG00000013143	-	57	44.693	ENSELUG00000013357	-	91	43.668
ENSELUG00000013143	-	76	42.979	ENSELUG00000021499	-	92	50.000
ENSELUG00000013143	-	75	40.984	ENSELUG00000001968	-	94	42.857
ENSELUG00000013143	-	71	34.632	ENSELUG00000006251	ZNF384	78	34.632
ENSELUG00000013143	-	75	46.489	ENSELUG00000008797	-	90	52.893
ENSELUG00000013143	-	56	44.390	ENSELUG00000012931	-	73	44.390
ENSELUG00000013143	-	75	51.128	ENSELUG00000008148	-	95	45.455
ENSELUG00000013143	-	51	39.914	ENSELUG00000013806	-	63	41.441
ENSELUG00000013143	-	74	46.067	ENSELUG00000019008	-	94	43.204
ENSELUG00000013143	-	70	32.493	ENSELUG00000012088	-	96	45.690
ENSELUG00000013143	-	65	51.799	ENSELUG00000022965	-	89	50.000
ENSELUG00000013143	-	58	34.783	ENSELUG00000018737	znf526	61	33.981
ENSELUG00000013143	-	70	46.429	ENSELUG00000018405	-	97	49.057
ENSELUG00000013143	-	74	40.496	ENSELUG00000013064	-	85	40.496
ENSELUG00000013143	-	53	47.826	ENSELUG00000013348	-	93	47.826
ENSELUG00000013143	-	54	49.738	ENSELUG00000017958	-	98	49.738
ENSELUG00000013143	-	75	53.271	ENSELUG00000007694	-	91	55.455
ENSELUG00000013143	-	51	38.009	ENSELUG00000021381	-	80	39.535
ENSELUG00000013143	-	61	53.968	ENSELUG00000013094	-	98	49.029
ENSELUG00000013143	-	73	49.091	ENSELUG00000019880	-	94	47.191
ENSELUG00000013143	-	74	46.544	ENSELUG00000020882	-	80	46.544
ENSELUG00000013143	-	77	46.524	ENSELUG00000016397	-	88	42.197
ENSELUG00000013143	-	76	64.474	ENSELUG00000000281	-	82	71.930
ENSELUG00000013143	-	58	32.195	ENSELUG00000017233	znf652	60	35.606
ENSELUG00000013143	-	76	48.529	ENSELUG00000008131	-	86	48.529
ENSELUG00000013143	-	50	45.729	ENSELUG00000011838	-	65	45.729
ENSELUG00000013143	-	59	49.580	ENSELUG00000004677	-	74	49.580