EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000013202 (Gene tree)
Gene ID: 105026214
Gene Symbol: -
Alias: -
Full Name: interferon-induced protein 44-like
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 7942 bases
Position: chrLG08:2996685-3004626
Accession: 105026214
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000013002	MMR_HSR1	PF01926.23	2.7e-05	1	1
ENSELUP00000013021	MMR_HSR1	PF01926.23	4.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000021442	-	1660	XM_010897527	ENSELUP00000013021	327 (aa)	XP_010895829	UPI0005763361
ENSELUT00000021426	-	1134	-	ENSELUP00000013002	377 (aa)	-	-

Gene Model

Click here to download ENSELUG00000013202's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000013202's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000013202	-	83	44.565	ENSELUG00000008265	zgc:153654	66	43.446
ENSELUG00000013202	-	84	42.336	ENSELUG00000013242	si:ch211-197g15.10	62	42.336

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000013202	-	85	70.504	ENSACLG00000022198	-	76	70.504	Astatotilapia_calliptera
ENSELUG00000013202	-	83	68.231	ENSHBUG00000009125	-	77	68.231	Haplochromis_burtoni
ENSELUG00000013202	-	85	70.504	ENSMZEG00005016318	-	76	70.504	Maylandia_zebra
ENSELUG00000013202	-	82	69.776	ENSNBRG00000021847	-	96	69.776	Neolamprologus_brichardi
ENSELUG00000013202	-	84	57.447	ENSPNYG00000016531	-	75	66.964	Pundamilia_nyererei
ENSELUG00000013202	-	88	65.517	ENSPNAG00000009985	-	77	65.517	Pygocentrus_nattereri
ENSELUG00000013202	-	80	71.103	ENSSLDG00000007218	-	77	71.103	Seriola_lalandi_dorsalis
ENSELUG00000013202	-	76	49.200	ENSTRUG00000002247	-	90	49.200	Takifugu_rubripes
ENSELUG00000013202	-	74	38.115	ENSTRUG00000003706	-	88	38.115	Takifugu_rubripes