EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000013205 (Gene tree)
Gene ID: 105020710
Gene Symbol: rbm4.1
Alias: rbm4|wu:fc31f07|wu:fc57h11
Full Name: RNA-binding protein 4.1
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 8735 bases
Position: chrLG24:15632488-15641222
Accession: 105020710
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000034571	zf-CCHC	PF00098.23	1.5e-07	1	1
ENSELUP00000013029	zf-CCHC	PF00098.23	1.5e-07	1	1
ENSELUP00000013029	RRM_5	PF13893.6	1.7e-07	1	1
ENSELUP00000034571	RRM_5	PF13893.6	8.2e-07	1	1
ENSELUP00000013029	RRM_1	PF00076.22	6.2e-36	1	2
ENSELUP00000013029	RRM_1	PF00076.22	6.2e-36	2	2
ENSELUP00000034571	RRM_1	PF00076.22	1.2e-34	1	2
ENSELUP00000034571	RRM_1	PF00076.22	1.2e-34	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000021454	-	3032	XM_020043572	ENSELUP00000034571	416 (aa)	XP_019899131	UPI000577B9CB
ENSELUT00000021463	-	3329	XM_020043571	ENSELUP00000013029	416 (aa)	XP_019899130	UPI0009732A4E

Gene Model

Click here to download ENSELUG00000013205's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000013205's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000013205	rbm4.1	99	52.632	ENSELUG00000022155	rbm4.3	82	52.632
ENSELUG00000013205	rbm4.1	64	50.000	ENSELUG00000022150	rbm4.3	78	50.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000013205	rbm4.1	100	68.471	ENSAPOG00000012353	rbm4.1	100	65.904	Acanthochromis_polyacanthus
ENSELUG00000013205	rbm4.1	100	64.679	ENSACIG00000016482	rbm4.1	100	66.745	Amphilophus_citrinellus
ENSELUG00000013205	rbm4.1	100	68.471	ENSAOCG00000010915	rbm4.1	100	65.904	Amphiprion_ocellaris
ENSELUG00000013205	rbm4.1	100	68.471	ENSAPEG00000009494	rbm4.1	100	65.904	Amphiprion_percula
ENSELUG00000013205	rbm4.1	100	65.826	ENSATEG00000001904	rbm4.1	100	67.681	Anabas_testudineus
ENSELUG00000013205	rbm4.1	100	63.761	ENSACLG00000007722	rbm4.1	100	65.802	Astatotilapia_calliptera
ENSELUG00000013205	rbm4.1	78	52.108	ENSACLG00000007740	-	96	47.356	Astatotilapia_calliptera
ENSELUG00000013205	rbm4.1	100	65.083	ENSAMXG00000036611	rbm4.1	100	64.371	Astyanax_mexicanus
ENSELUG00000013205	rbm4.1	100	58.879	ENSCSEG00000014365	rbm4.1	100	58.314	Cynoglossus_semilaevis
ENSELUG00000013205	rbm4.1	99	51.537	ENSCSEG00000014359	-	99	50.233	Cynoglossus_semilaevis
ENSELUG00000013205	rbm4.1	100	63.146	ENSCVAG00000019349	rbm4.1	100	62.648	Cyprinodon_variegatus
ENSELUG00000013205	rbm4.1	100	71.529	ENSDARG00000036386	rbm4.1	100	70.991	Danio_rerio
ENSELUG00000013205	rbm4.1	100	49.882	ENSDARG00000055080	rbm4.2	100	50.353	Danio_rerio
ENSELUG00000013205	rbm4.1	100	62.150	ENSFHEG00000022926	rbm4.1	100	61.792	Fundulus_heteroclitus
ENSELUG00000013205	rbm4.1	93	54.408	ENSGMOG00000007455	-	96	52.336	Gadus_morhua
ENSELUG00000013205	rbm4.1	100	60.046	ENSGMOG00000007464	rbm4.1	100	63.146	Gadus_morhua
ENSELUG00000013205	rbm4.1	100	62.676	ENSGAFG00000019302	rbm4.1	100	61.882	Gambusia_affinis
ENSELUG00000013205	rbm4.1	100	63.805	ENSGACG00000000822	rbm4.1	100	63.765	Gasterosteus_aculeatus
ENSELUG00000013205	rbm4.1	96	49.760	ENSGACG00000000821	-	96	48.471	Gasterosteus_aculeatus
ENSELUG00000013205	rbm4.1	100	63.761	ENSHBUG00000011610	rbm4.1	100	65.802	Haplochromis_burtoni
ENSELUG00000013205	rbm4.1	95	57.320	ENSHCOG00000011403	rbm4.1	98	57.072	Hippocampus_comes
ENSELUG00000013205	rbm4.1	93	51.654	ENSIPUG00000022937	rbm4.2	100	51.773	Ictalurus_punctatus
ENSELUG00000013205	rbm4.1	100	65.760	ENSIPUG00000022931	rbm4.1	100	65.982	Ictalurus_punctatus
ENSELUG00000013205	rbm4.1	99	45.805	ENSKMAG00000006528	-	99	46.032	Kryptolebias_marmoratus
ENSELUG00000013205	rbm4.1	100	64.000	ENSKMAG00000006556	rbm4.1	100	63.208	Kryptolebias_marmoratus
ENSELUG00000013205	rbm4.1	100	63.023	ENSLBEG00000019782	rbm4.1	100	63.679	Labrus_bergylta
ENSELUG00000013205	rbm4.1	98	49.642	ENSLBEG00000019756	-	90	67.308	Labrus_bergylta
ENSELUG00000013205	rbm4.1	100	64.908	ENSMAMG00000001765	rbm4.1	100	66.745	Mastacembelus_armatus
ENSELUG00000013205	rbm4.1	97	51.202	ENSMAMG00000001760	-	97	51.196	Mastacembelus_armatus
ENSELUG00000013205	rbm4.1	100	63.761	ENSMZEG00005009205	rbm4.1	100	65.802	Maylandia_zebra
ENSELUG00000013205	rbm4.1	100	64.352	ENSMMOG00000020479	rbm4.1	100	65.421	Mola_mola
ENSELUG00000013205	rbm4.1	100	69.159	ENSMALG00000020544	rbm4.1	100	67.916	Monopterus_albus
ENSELUG00000013205	rbm4.1	99	49.769	ENSMALG00000020557	-	99	48.292	Monopterus_albus
ENSELUG00000013205	rbm4.1	100	63.761	ENSNBRG00000017755	rbm4.1	100	65.802	Neolamprologus_brichardi
ENSELUG00000013205	rbm4.1	100	63.761	ENSONIG00000015730	rbm4.1	100	65.802	Oreochromis_niloticus
ENSELUG00000013205	rbm4.1	100	59.815	ENSORLG00000012496	rbm4.1	100	61.939	Oryzias_latipes
ENSELUG00000013205	rbm4.1	100	59.815	ENSORLG00020012454	rbm4.1	100	61.939	Oryzias_latipes_hni
ENSELUG00000013205	rbm4.1	100	59.815	ENSORLG00015013678	rbm4.1	100	61.939	Oryzias_latipes_hsok
ENSELUG00000013205	rbm4.1	100	60.277	ENSOMEG00000001001	rbm4.1	100	61.538	Oryzias_melastigma
ENSELUG00000013205	rbm4.1	100	64.103	ENSPKIG00000020805	rbm4.1	85	84.058	Paramormyrops_kingsleyae
ENSELUG00000013205	rbm4.1	100	62.676	ENSPFOG00000012675	rbm4.1	100	61.882	Poecilia_formosa
ENSELUG00000013205	rbm4.1	99	47.733	ENSPFOG00000012685	-	99	47.406	Poecilia_formosa
ENSELUG00000013205	rbm4.1	100	62.676	ENSPLAG00000018572	rbm4.1	100	61.882	Poecilia_latipinna
ENSELUG00000013205	rbm4.1	100	62.676	ENSPMEG00000006290	rbm4.1	100	61.882	Poecilia_mexicana
ENSELUG00000013205	rbm4.1	100	62.676	ENSPREG00000003724	rbm4.1	100	61.882	Poecilia_reticulata
ENSELUG00000013205	rbm4.1	99	45.823	ENSPREG00000003764	-	88	68.649	Poecilia_reticulata
ENSELUG00000013205	rbm4.1	100	63.761	ENSPNYG00000004662	rbm4.1	100	65.802	Pundamilia_nyererei
ENSELUG00000013205	rbm4.1	100	49.188	ENSPNAG00000013057	rbm4.2	100	49.420	Pygocentrus_nattereri
ENSELUG00000013205	rbm4.1	100	68.941	ENSPNAG00000002539	rbm4.1	100	68.545	Pygocentrus_nattereri
ENSELUG00000013205	rbm4.1	100	65.035	ENSSFOG00015021996	sf1	100	66.279	Scleropages_formosus
ENSELUG00000013205	rbm4.1	100	65.574	ENSSMAG00000007571	rbm4.1	100	65.105	Scophthalmus_maximus
ENSELUG00000013205	rbm4.1	99	52.620	ENSSDUG00000003936	-	97	53.589	Seriola_dumerili
ENSELUG00000013205	rbm4.1	100	68.868	ENSSDUG00000003925	rbm4.1	100	68.868	Seriola_dumerili
ENSELUG00000013205	rbm4.1	78	55.247	ENSSLDG00000013157	-	97	51.620	Seriola_lalandi_dorsalis
ENSELUG00000013205	rbm4.1	100	68.868	ENSSLDG00000013147	rbm4.1	100	68.868	Seriola_lalandi_dorsalis
ENSELUG00000013205	rbm4.1	100	66.979	ENSSPAG00000019053	rbm4.1	100	68.160	Stegastes_partitus
ENSELUG00000013205	rbm4.1	99	50.000	ENSSPAG00000019046	-	99	49.763	Stegastes_partitus
ENSELUG00000013205	rbm4.1	99	46.868	ENSTRUG00000013328	-	52	68.367	Takifugu_rubripes
ENSELUG00000013205	rbm4.1	100	60.377	ENSTRUG00000013334	rbm4.1	100	60.377	Takifugu_rubripes
ENSELUG00000013205	rbm4.1	100	77.436	ENSTNIG00000004821	rbm4.1	99	77.436	Tetraodon_nigroviridis
ENSELUG00000013205	rbm4.1	89	64.211	ENSXETG00000026649	rbm4b	93	64.211	Xenopus_tropicalis
ENSELUG00000013205	rbm4.1	100	62.441	ENSXCOG00000003731	rbm4.1	100	61.647	Xiphophorus_couchianus
ENSELUG00000013205	rbm4.1	100	62.441	ENSXMAG00000008069	rbm4.1	100	61.647	Xiphophorus_maculatus
ENSELUG00000013205	rbm4.1	99	69.189	ENSXMAG00000008059	-	87	69.730	Xiphophorus_maculatus