EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000013225 (Gene tree)
Gene ID: 105020708
Gene Symbol: sf1
Alias: wu:fc09f06|znf162
Full Name: splicing factor 1
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 10592 bases
Position: chrLG24:15620784-15631375
Accession: 105020708
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000013049	KH_1	PF00013.29	5.6e-06	1	1
ENSELUP00000013049	zf-CCHC	PF00098.23	0.00055	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000021501	-	2951	XM_013140455	ENSELUP00000013049	759 (aa)	XP_012995909	-

Gene Model

Click here to download ENSELUG00000013225's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000013225's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000013225	sf1	64	82.209	ENSAPOG00000012341	sf1	77	78.439	Acanthochromis_polyacanthus
ENSELUG00000013225	sf1	54	78.230	ENSAMEG00000017828	SF1	57	81.432	Ailuropoda_melanoleuca
ENSELUG00000013225	sf1	60	80.568	ENSACIG00000016514	sf1	70	78.528	Amphilophus_citrinellus
ENSELUG00000013225	sf1	64	82.172	ENSAOCG00000010934	sf1	78	78.212	Amphiprion_ocellaris
ENSELUG00000013225	sf1	64	82.172	ENSAPEG00000009498	sf1	78	78.212	Amphiprion_percula
ENSELUG00000013225	sf1	60	84.783	ENSATEG00000001894	sf1	78	79.330	Anabas_testudineus
ENSELUG00000013225	sf1	53	70.588	ENSANAG00000022607	-	88	71.968	Aotus_nancymaae
ENSELUG00000013225	sf1	57	76.376	ENSANAG00000026664	-	88	81.432	Aotus_nancymaae
ENSELUG00000013225	sf1	60	83.442	ENSACLG00000007633	sf1	73	79.959	Astatotilapia_calliptera
ENSELUG00000013225	sf1	60	84.632	ENSAMXG00000003630	sf1	63	81.224	Astyanax_mexicanus
ENSELUG00000013225	sf1	54	78.230	ENSBTAG00000001035	SF1	61	81.432	Bos_taurus
ENSELUG00000013225	sf1	54	78.230	ENSCJAG00000002780	SF1	75	67.899	Callithrix_jacchus
ENSELUG00000013225	sf1	54	78.230	ENSCAFG00000014239	SF1	58	81.432	Canis_familiaris
ENSELUG00000013225	sf1	54	78.230	ENSCAFG00020014381	SF1	58	81.432	Canis_lupus_dingo
ENSELUG00000013225	sf1	54	78.230	ENSCHIG00000025867	SF1	67	81.432	Capra_hircus
ENSELUG00000013225	sf1	53	78.450	ENSCAPG00000010762	SF1	65	81.720	Cavia_aperea
ENSELUG00000013225	sf1	54	78.230	ENSCPOG00000012290	SF1	68	81.720	Cavia_porcellus
ENSELUG00000013225	sf1	54	79.661	ENSCCAG00000037881	SF1	88	81.432	Cebus_capucinus
ENSELUG00000013225	sf1	54	69.976	ENSCCAG00000023781	-	70	78.769	Cebus_capucinus
ENSELUG00000013225	sf1	54	78.230	ENSCATG00000011564	SF1	88	81.432	Cercocebus_atys
ENSELUG00000013225	sf1	54	78.230	ENSCSAG00000007258	SF1	67	81.432	Chlorocebus_sabaeus
ENSELUG00000013225	sf1	51	72.864	ENSCHOG00000006008	SF1	66	75.630	Choloepus_hoffmanni
ENSELUG00000013225	sf1	57	79.405	ENSCPBG00000023763	SF1	52	79.805	Chrysemys_picta_bellii
ENSELUG00000013225	sf1	53	57.518	ENSCING00000005564	-	83	57.210	Ciona_intestinalis
ENSELUG00000013225	sf1	55	57.981	ENSCSAVG00000009055	-	60	67.188	Ciona_savignyi
ENSELUG00000013225	sf1	54	78.230	ENSCANG00000042201	SF1	88	81.432	Colobus_angolensis_palliatus
ENSELUG00000013225	sf1	54	79.426	ENSCGRG00001003677	Sf1	65	81.963	Cricetulus_griseus_chok1gshd
ENSELUG00000013225	sf1	53	79.661	ENSCGRG00000001708	Sf1	67	82.258	Cricetulus_griseus_crigri
ENSELUG00000013225	sf1	65	82.020	ENSCSEG00000014375	sf1	74	78.505	Cynoglossus_semilaevis
ENSELUG00000013225	sf1	60	84.165	ENSCVAG00000001670	sf1	77	77.365	Cyprinodon_variegatus
ENSELUG00000013225	sf1	61	84.188	ENSDARG00000008188	sf1	68	86.318	Danio_rerio
ENSELUG00000013225	sf1	54	78.230	ENSDNOG00000001282	SF1	67	81.432	Dasypus_novemcinctus
ENSELUG00000013225	sf1	54	78.282	ENSDORG00000016334	Sf1	58	81.481	Dipodomys_ordii
ENSELUG00000013225	sf1	62	54.491	ENSEBUG00000012728	sf1	58	59.251	Eptatretus_burgeri
ENSELUG00000013225	sf1	54	77.990	ENSEASG00005018272	SF1	67	81.167	Equus_asinus_asinus
ENSELUG00000013225	sf1	54	77.990	ENSECAG00000024544	SF1	67	81.167	Equus_caballus
ENSELUG00000013225	sf1	54	78.230	ENSFCAG00000012231	SF1	75	68.226	Felis_catus
ENSELUG00000013225	sf1	53	78.450	ENSFDAG00000009833	SF1	65	81.720	Fukomys_damarensis
ENSELUG00000013225	sf1	60	85.033	ENSFHEG00000022656	sf1	77	79.252	Fundulus_heteroclitus
ENSELUG00000013225	sf1	57	81.609	ENSGMOG00000007469	sf1	60	94.801	Gadus_morhua
ENSELUG00000013225	sf1	64	80.855	ENSGAFG00000019284	sf1	85	77.425	Gambusia_affinis
ENSELUG00000013225	sf1	50	89.182	ENSGACG00000000826	sf1	70	86.341	Gasterosteus_aculeatus
ENSELUG00000013225	sf1	57	79.176	ENSGAGG00000021691	SF1	71	69.246	Gopherus_agassizii
ENSELUG00000013225	sf1	60	84.632	ENSHBUG00000011598	sf1	78	78.810	Haplochromis_burtoni
ENSELUG00000013225	sf1	54	78.230	ENSHGLG00000009541	SF1	65	81.432	Heterocephalus_glaber_female
ENSELUG00000013225	sf1	53	78.450	ENSHGLG00100013879	-	65	81.720	Heterocephalus_glaber_male
ENSELUG00000013225	sf1	50	71.642	ENSHGLG00100008255	-	70	76.791	Heterocephalus_glaber_male
ENSELUG00000013225	sf1	63	82.158	ENSHCOG00000011388	sf1	77	77.467	Hippocampus_comes
ENSELUG00000013225	sf1	53	78.450	ENSSTOG00000009790	-	58	81.720	Ictidomys_tridecemlineatus
ENSELUG00000013225	sf1	54	78.469	ENSJJAG00000011788	Sf1	58	81.698	Jaculus_jaculus
ENSELUG00000013225	sf1	61	82.692	ENSKMAG00000005854	sf1	80	77.757	Kryptolebias_marmoratus
ENSELUG00000013225	sf1	63	82.143	ENSLBEG00000019836	sf1	78	85.990	Labrus_bergylta
ENSELUG00000013225	sf1	55	77.033	ENSLACG00000018493	SF1	74	75.485	Latimeria_chalumnae
ENSELUG00000013225	sf1	60	82.627	ENSLOCG00000002130	sf1	72	82.516	Lepisosteus_oculatus
ENSELUG00000013225	sf1	54	79.475	ENSLAFG00000007201	SF1	63	82.493	Loxodonta_africana
ENSELUG00000013225	sf1	54	78.230	ENSMFAG00000033122	SF1	88	81.432	Macaca_fascicularis
ENSELUG00000013225	sf1	54	78.230	ENSMMUG00000022606	SF1	90	81.432	Macaca_mulatta
ENSELUG00000013225	sf1	54	78.230	ENSMNEG00000037901	SF1	88	81.432	Macaca_nemestrina
ENSELUG00000013225	sf1	55	77.176	ENSMLEG00000040706	SF1	88	81.720	Mandrillus_leucophaeus
ENSELUG00000013225	sf1	60	85.313	ENSMAMG00000001780	sf1	78	79.777	Mastacembelus_armatus
ENSELUG00000013225	sf1	60	84.632	ENSMZEG00005009196	sf1	78	78.810	Maylandia_zebra
ENSELUG00000013225	sf1	54	79.426	ENSMAUG00000014064	Sf1	65	81.963	Mesocricetus_auratus
ENSELUG00000013225	sf1	54	78.230	ENSMICG00000001202	SF1	88	81.217	Microcebus_murinus
ENSELUG00000013225	sf1	54	78.947	ENSMOCG00000022038	Sf1	65	82.228	Microtus_ochrogaster
ENSELUG00000013225	sf1	60	82.571	ENSMMOG00000020474	sf1	70	79.755	Mola_mola
ENSELUG00000013225	sf1	54	78.230	ENSMODG00000029407	SF1	80	81.698	Monodelphis_domestica
ENSELUG00000013225	sf1	60	81.046	ENSMALG00000020521	sf1	77	78.528	Monopterus_albus
ENSELUG00000013225	sf1	54	79.426	MGP_CAROLIEiJ_G0022607	Sf1	99	93.985	Mus_caroli
ENSELUG00000013225	sf1	54	79.426	ENSMUSG00000024949	Sf1	99	93.985	Mus_musculus
ENSELUG00000013225	sf1	54	79.426	MGP_PahariEiJ_G0014101	Sf1	99	93.985	Mus_pahari
ENSELUG00000013225	sf1	54	79.426	MGP_SPRETEiJ_G0023518	Sf1	99	93.985	Mus_spretus
ENSELUG00000013225	sf1	54	78.230	ENSMPUG00000012684	SF1	58	81.432	Mustela_putorius_furo
ENSELUG00000013225	sf1	54	78.230	ENSMLUG00000015217	-	58	81.432	Myotis_lucifugus
ENSELUG00000013225	sf1	57	73.649	ENSMLUG00000029800	-	63	77.719	Myotis_lucifugus
ENSELUG00000013225	sf1	54	78.469	ENSNGAG00000005550	Sf1	65	81.698	Nannospalax_galili
ENSELUG00000013225	sf1	60	83.224	ENSNBRG00000017606	sf1	98	63.040	Neolamprologus_brichardi
ENSELUG00000013225	sf1	54	78.469	ENSNLEG00000005236	-	88	81.432	Nomascus_leucogenys
ENSELUG00000013225	sf1	56	71.806	ENSODEG00000006102	-	59	78.780	Octodon_degus
ENSELUG00000013225	sf1	60	84.199	ENSONIG00000015728	sf1	78	78.439	Oreochromis_niloticus
ENSELUG00000013225	sf1	54	78.230	ENSOCUG00000026486	SF1	59	81.432	Oryctolagus_cuniculus
ENSELUG00000013225	sf1	61	84.764	ENSORLG00000011853	sf1	69	80.855	Oryzias_latipes
ENSELUG00000013225	sf1	61	84.764	ENSORLG00020011834	sf1	69	80.855	Oryzias_latipes_hni
ENSELUG00000013225	sf1	61	84.052	ENSORLG00015012855	sf1	70	80.652	Oryzias_latipes_hsok
ENSELUG00000013225	sf1	54	78.230	ENSOGAG00000016196	SF1	58	81.432	Otolemur_garnettii
ENSELUG00000013225	sf1	54	78.230	ENSOARG00000009166	SF1	65	81.432	Ovis_aries
ENSELUG00000013225	sf1	57	75.632	ENSPPAG00000002799	-	90	81.432	Pan_paniscus
ENSELUG00000013225	sf1	54	78.230	ENSPPRG00000013566	SF1	57	82.451	Panthera_pardus
ENSELUG00000013225	sf1	54	78.230	ENSPTIG00000016141	SF1	66	81.432	Panthera_tigris_altaica
ENSELUG00000013225	sf1	55	78.271	ENSPTRG00000003846	SF1	88	81.432	Pan_troglodytes
ENSELUG00000013225	sf1	54	78.230	ENSPANG00000020754	SF1	88	81.432	Papio_anubis
ENSELUG00000013225	sf1	54	79.426	ENSPEMG00000010463	Sf1	65	81.963	Peromyscus_maniculatus_bairdii
ENSELUG00000013225	sf1	54	78.230	ENSPCIG00000018173	SF1	60	81.698	Phascolarctos_cinereus
ENSELUG00000013225	sf1	60	83.226	ENSPFOG00000013683	sf1	78	77.551	Poecilia_formosa
ENSELUG00000013225	sf1	57	80.856	ENSPLAG00000018076	sf1	71	77.893	Poecilia_latipinna
ENSELUG00000013225	sf1	60	83.226	ENSPMEG00000005726	sf1	78	77.551	Poecilia_mexicana
ENSELUG00000013225	sf1	60	82.796	ENSPREG00000004155	sf1	78	77.180	Poecilia_reticulata
ENSELUG00000013225	sf1	54	78.230	ENSPPYG00000003098	-	70	81.432	Pongo_abelii
ENSELUG00000013225	sf1	54	77.990	ENSPCAG00000013631	SF1	75	67.843	Procavia_capensis
ENSELUG00000013225	sf1	54	78.230	ENSPCOG00000027546	SF1	88	81.217	Propithecus_coquereli
ENSELUG00000013225	sf1	54	78.230	ENSPVAG00000016938	SF1	75	68.651	Pteropus_vampyrus
ENSELUG00000013225	sf1	60	84.665	ENSPNYG00000004673	sf1	78	79.221	Pundamilia_nyererei
ENSELUG00000013225	sf1	60	84.599	ENSPNAG00000013072	sf1	71	81.391	Pygocentrus_nattereri
ENSELUG00000013225	sf1	54	79.426	ENSRNOG00000021085	Sf1	60	81.494	Rattus_norvegicus
ENSELUG00000013225	sf1	54	78.230	ENSRBIG00000042818	SF1	88	81.432	Rhinopithecus_bieti
ENSELUG00000013225	sf1	53	78.537	ENSRROG00000045655	SF1	88	81.720	Rhinopithecus_roxellana
ENSELUG00000013225	sf1	54	65.962	ENSSBOG00000022267	-	85	70.201	Saimiri_boliviensis_boliviensis
ENSELUG00000013225	sf1	54	80.685	ENSSHAG00000006841	SF1	69	83.820	Sarcophilus_harrisii
ENSELUG00000013225	sf1	64	80.777	ENSSFOG00015021978	sf1	69	79.141	Scleropages_formosus
ENSELUG00000013225	sf1	65	83.826	ENSSMAG00000007549	sf1	76	83.133	Scophthalmus_maximus
ENSELUG00000013225	sf1	54	89.423	ENSSDUG00000003903	sf1	81	79.963	Seriola_dumerili
ENSELUG00000013225	sf1	54	89.183	ENSSLDG00000013075	sf1	78	80.037	Seriola_lalandi_dorsalis
ENSELUG00000013225	sf1	53	73.850	ENSSARG00000008180	SF1	71	76.613	Sorex_araneus
ENSELUG00000013225	sf1	53	78.689	ENSSPUG00000012907	SF1	65	81.586	Sphenodon_punctatus
ENSELUG00000013225	sf1	64	83.402	ENSSPAG00000019060	sf1	78	78.957	Stegastes_partitus
ENSELUG00000013225	sf1	54	78.230	ENSSSCG00000013021	SF1	67	81.432	Sus_scrofa
ENSELUG00000013225	sf1	50	74.495	ENSTNIG00000004820	sf1	83	70.288	Tetraodon_nigroviridis
ENSELUG00000013225	sf1	53	74.576	ENSTTRG00000008857	SF1	67	76.613	Tursiops_truncatus
ENSELUG00000013225	sf1	54	80.387	ENSUMAG00000007268	SF1	69	81.481	Ursus_maritimus
ENSELUG00000013225	sf1	54	78.230	ENSVVUG00000028585	SF1	67	81.432	Vulpes_vulpes
ENSELUG00000013225	sf1	60	73.319	ENSXETG00000008434	sf1	56	91.411	Xenopus_tropicalis
ENSELUG00000013225	sf1	60	82.937	ENSXMAG00000007822	sf1	80	77.612	Xiphophorus_maculatus