EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000013353 (Gene tree)
Gene ID: 105030220
Gene Symbol: cnot6l
Alias: zgc:111987
Full Name: CCR4-NOT transcription complex subunit 6 like
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 25990 bases
Position: chrLG13:34596221-34622210
Accession: 105030220
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000013199	Exo_endo_phos	PF03372.23	2.8e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000021666	-	7039	XM_013136981	ENSELUP00000013199	629 (aa)	XP_012992435	UPI000576CDB9

Gene Model

Click here to download ENSELUG00000013353's gene model file

Pathways

Pathway ID	Pathway Name	Source
els03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000013353's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000013353	cnot6l	87	73.227	ENSELUG00000015981	cnot6b	99	73.227
ENSELUG00000013353	cnot6l	87	72.202	ENSELUG00000024580	cnot6a	99	72.202

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000013353	cnot6l	88	83.032	ENSG00000138767	CNOT6L	100	90.506	Homo_sapiens
ENSELUG00000013353	cnot6l	87	91.486	ENSAPOG00000005894	cnot6l	99	92.391	Acanthochromis_polyacanthus
ENSELUG00000013353	cnot6l	88	82.852	ENSAMEG00000005570	CNOT6L	99	83.213	Ailuropoda_melanoleuca
ENSELUG00000013353	cnot6l	87	91.667	ENSACIG00000002515	cnot6l	99	92.572	Amphilophus_citrinellus
ENSELUG00000013353	cnot6l	87	87.681	ENSAOCG00000006705	cnot6l	99	88.587	Amphiprion_ocellaris
ENSELUG00000013353	cnot6l	87	85.688	ENSAPEG00000020035	cnot6l	99	86.594	Amphiprion_percula
ENSELUG00000013353	cnot6l	87	92.029	ENSATEG00000008774	cnot6l	99	92.572	Anabas_testudineus
ENSELUG00000013353	cnot6l	87	81.982	ENSAPLG00000003448	CNOT6L	99	82.342	Anas_platyrhynchos
ENSELUG00000013353	cnot6l	88	82.523	ENSACAG00000012099	CNOT6L	99	82.523	Anolis_carolinensis
ENSELUG00000013353	cnot6l	88	83.094	ENSANAG00000023917	CNOT6L	99	83.394	Aotus_nancymaae
ENSELUG00000013353	cnot6l	87	90.761	ENSACLG00000000879	cnot6l	99	91.667	Astatotilapia_calliptera
ENSELUG00000013353	cnot6l	88	88.628	ENSAMXG00000008943	cnot6l	98	88.628	Astyanax_mexicanus
ENSELUG00000013353	cnot6l	88	83.032	ENSBTAG00000049571	CNOT6L	99	83.394	Bos_taurus
ENSELUG00000013353	cnot6l	88	83.094	ENSCJAG00000014846	CNOT6L	99	83.394	Callithrix_jacchus
ENSELUG00000013353	cnot6l	88	83.032	ENSCAFG00000008699	CNOT6L	99	83.394	Canis_familiaris
ENSELUG00000013353	cnot6l	87	82.847	ENSCAFG00020011108	CNOT6L	99	83.212	Canis_lupus_dingo
ENSELUG00000013353	cnot6l	88	83.032	ENSCHIG00000006297	CNOT6L	99	83.394	Capra_hircus
ENSELUG00000013353	cnot6l	87	83.091	ENSTSYG00000009068	CNOT6L	99	83.455	Carlito_syrichta
ENSELUG00000013353	cnot6l	75	87.805	ENSCPOG00000010337	CNOT6L	99	87.805	Cavia_porcellus
ENSELUG00000013353	cnot6l	88	83.094	ENSCCAG00000025000	CNOT6L	99	83.394	Cebus_capucinus
ENSELUG00000013353	cnot6l	88	83.094	ENSCATG00000029623	CNOT6L	99	83.394	Cercocebus_atys
ENSELUG00000013353	cnot6l	88	82.821	ENSCLAG00000004598	CNOT6L	99	82.821	Chinchilla_lanigera
ENSELUG00000013353	cnot6l	88	83.032	ENSCSAG00000004580	CNOT6L	99	83.394	Chlorocebus_sabaeus
ENSELUG00000013353	cnot6l	65	76.471	ENSCHOG00000001108	-	69	79.412	Choloepus_hoffmanni
ENSELUG00000013353	cnot6l	87	82.727	ENSCPBG00000019403	CNOT6L	99	83.091	Chrysemys_picta_bellii
ENSELUG00000013353	cnot6l	88	83.032	ENSCANG00000028583	CNOT6L	99	83.394	Colobus_angolensis_palliatus
ENSELUG00000013353	cnot6l	88	81.949	ENSCGRG00001022099	Cnot6l	99	82.396	Cricetulus_griseus_chok1gshd
ENSELUG00000013353	cnot6l	87	81.273	ENSCGRG00000000543	Cnot6l	99	81.636	Cricetulus_griseus_crigri
ENSELUG00000013353	cnot6l	66	88.249	ENSCSEG00000010395	-	98	88.249	Cynoglossus_semilaevis
ENSELUG00000013353	cnot6l	87	88.022	ENSCSEG00000014001	cnot6l	99	88.022	Cynoglossus_semilaevis
ENSELUG00000013353	cnot6l	85	91.806	ENSCVAG00000021683	cnot6l	96	91.806	Cyprinodon_variegatus
ENSELUG00000013353	cnot6l	89	88.869	ENSDARG00000054597	cnot6l	99	88.869	Danio_rerio
ENSELUG00000013353	cnot6l	88	74.731	ENSDNOG00000004229	CNOT6L	98	78.193	Dasypus_novemcinctus
ENSELUG00000013353	cnot6l	87	74.364	ENSDORG00000011458	Cnot6l	99	74.364	Dipodomys_ordii
ENSELUG00000013353	cnot6l	87	71.071	ENSEBUG00000004849	cnot6l	99	71.071	Eptatretus_burgeri
ENSELUG00000013353	cnot6l	77	83.951	ENSEASG00005016429	CNOT6L	92	83.951	Equus_asinus_asinus
ENSELUG00000013353	cnot6l	81	82.651	ENSECAG00000001582	CNOT6L	88	83.951	Equus_caballus
ENSELUG00000013353	cnot6l	88	83.094	ENSFCAG00000008322	CNOT6L	99	83.394	Felis_catus
ENSELUG00000013353	cnot6l	88	83.183	ENSFALG00000008515	CNOT6L	99	83.544	Ficedula_albicollis
ENSELUG00000013353	cnot6l	88	83.243	ENSFDAG00000007719	CNOT6L	95	83.243	Fukomys_damarensis
ENSELUG00000013353	cnot6l	87	81.949	ENSFHEG00000012364	cnot6l	99	82.310	Fundulus_heteroclitus
ENSELUG00000013353	cnot6l	80	65.551	ENSGMOG00000011077	-	99	65.551	Gadus_morhua
ENSELUG00000013353	cnot6l	77	78.719	ENSGMOG00000000730	cnot6l	99	78.719	Gadus_morhua
ENSELUG00000013353	cnot6l	88	82.609	ENSGALG00000010333	CNOT6L	90	82.971	Gallus_gallus
ENSELUG00000013353	cnot6l	85	90.654	ENSGAFG00000006105	cnot6l	99	90.654	Gambusia_affinis
ENSELUG00000013353	cnot6l	76	83.817	ENSGAGG00000008605	CNOT6L	93	83.817	Gopherus_agassizii
ENSELUG00000013353	cnot6l	88	83.094	ENSGGOG00000023412	CNOT6L	98	83.453	Gorilla_gorilla
ENSELUG00000013353	cnot6l	87	90.942	ENSHBUG00000004755	cnot6l	95	92.917	Haplochromis_burtoni
ENSELUG00000013353	cnot6l	88	83.032	ENSHGLG00000006452	CNOT6L	99	83.091	Heterocephalus_glaber_female
ENSELUG00000013353	cnot6l	88	83.032	ENSHGLG00100012384	CNOT6L	98	83.032	Heterocephalus_glaber_male
ENSELUG00000013353	cnot6l	87	77.680	ENSHCOG00000009512	cnot6l	99	77.797	Hippocampus_comes
ENSELUG00000013353	cnot6l	87	88.545	ENSIPUG00000009879	cnot6l	99	88.545	Ictalurus_punctatus
ENSELUG00000013353	cnot6l	87	83.091	ENSSTOG00000015293	CNOT6L	99	83.455	Ictidomys_tridecemlineatus
ENSELUG00000013353	cnot6l	88	82.459	ENSJJAG00000020583	Cnot6l	99	82.821	Jaculus_jaculus
ENSELUG00000013353	cnot6l	87	90.761	ENSKMAG00000004165	cnot6l	99	91.123	Kryptolebias_marmoratus
ENSELUG00000013353	cnot6l	87	89.455	ENSLBEG00000027202	cnot6l	99	89.455	Labrus_bergylta
ENSELUG00000013353	cnot6l	87	84.124	ENSLACG00000004684	CNOT6L	99	84.124	Latimeria_chalumnae
ENSELUG00000013353	cnot6l	93	81.709	ENSLOCG00000007420	cnot6l	97	81.709	Lepisosteus_oculatus
ENSELUG00000013353	cnot6l	89	82.469	ENSLAFG00000011449	CNOT6L	99	81.673	Loxodonta_africana
ENSELUG00000013353	cnot6l	88	83.094	ENSMFAG00000044296	CNOT6L	99	83.453	Macaca_fascicularis
ENSELUG00000013353	cnot6l	88	82.852	ENSMMUG00000045609	CNOT6L	99	83.094	Macaca_mulatta
ENSELUG00000013353	cnot6l	88	83.094	ENSMNEG00000041259	CNOT6L	99	83.455	Macaca_nemestrina
ENSELUG00000013353	cnot6l	88	82.734	ENSMLEG00000029198	CNOT6L	99	83.094	Mandrillus_leucophaeus
ENSELUG00000013353	cnot6l	88	91.682	ENSMAMG00000016954	cnot6l	99	92.586	Mastacembelus_armatus
ENSELUG00000013353	cnot6l	87	90.761	ENSMZEG00005020235	cnot6l	99	91.667	Maylandia_zebra
ENSELUG00000013353	cnot6l	88	82.640	ENSMGAG00000005144	CNOT6L	99	83.002	Meleagris_gallopavo
ENSELUG00000013353	cnot6l	88	82.852	ENSMICG00000017026	CNOT6L	99	83.273	Microcebus_murinus
ENSELUG00000013353	cnot6l	88	81.949	ENSMOCG00000009451	Cnot6l	99	82.396	Microtus_ochrogaster
ENSELUG00000013353	cnot6l	87	92.029	ENSMMOG00000014621	cnot6l	99	92.029	Mola_mola
ENSELUG00000013353	cnot6l	88	82.734	ENSMODG00000011744	CNOT6L	77	82.042	Monodelphis_domestica
ENSELUG00000013353	cnot6l	87	90.597	ENSMALG00000006354	cnot6l	99	91.863	Monopterus_albus
ENSELUG00000013353	cnot6l	88	81.949	MGP_CAROLIEiJ_G0027429	Cnot6l	99	83.486	Mus_caroli
ENSELUG00000013353	cnot6l	88	81.949	ENSMUSG00000034724	Cnot6l	99	83.486	Mus_musculus
ENSELUG00000013353	cnot6l	88	81.949	MGP_PahariEiJ_G0017207	Cnot6l	99	82.364	Mus_pahari
ENSELUG00000013353	cnot6l	88	81.949	MGP_SPRETEiJ_G0028426	Cnot6l	99	82.364	Mus_spretus
ENSELUG00000013353	cnot6l	83	78.817	ENSMPUG00000003895	CNOT6L	99	79.198	Mustela_putorius_furo
ENSELUG00000013353	cnot6l	81	82.490	ENSMLUG00000000936	CNOT6L	99	82.879	Myotis_lucifugus
ENSELUG00000013353	cnot6l	88	81.769	ENSNGAG00000019803	Cnot6l	99	82.182	Nannospalax_galili
ENSELUG00000013353	cnot6l	80	88.911	ENSNBRG00000016345	cnot6l	82	89.307	Neolamprologus_brichardi
ENSELUG00000013353	cnot6l	88	83.094	ENSNLEG00000028820	CNOT6L	99	83.453	Nomascus_leucogenys
ENSELUG00000013353	cnot6l	70	69.615	ENSMEUG00000009767	-	77	69.863	Notamacropus_eugenii
ENSELUG00000013353	cnot6l	88	83.032	ENSODEG00000004161	CNOT6L	99	83.032	Octodon_degus
ENSELUG00000013353	cnot6l	88	90.374	ENSONIG00000013992	cnot6l	97	91.266	Oreochromis_niloticus
ENSELUG00000013353	cnot6l	87	83.091	ENSOANG00000003561	CNOT6L	99	83.273	Ornithorhynchus_anatinus
ENSELUG00000013353	cnot6l	88	83.032	ENSOCUG00000002497	CNOT6L	99	83.394	Oryctolagus_cuniculus
ENSELUG00000013353	cnot6l	87	88.043	ENSORLG00000018874	cnot6l	99	88.225	Oryzias_latipes
ENSELUG00000013353	cnot6l	87	88.225	ENSOMEG00000010026	cnot6l	99	88.225	Oryzias_melastigma
ENSELUG00000013353	cnot6l	87	79.820	ENSOGAG00000012122	CNOT6L	99	78.739	Otolemur_garnettii
ENSELUG00000013353	cnot6l	88	83.032	ENSOARG00000017771	CNOT6L	99	83.394	Ovis_aries
ENSELUG00000013353	cnot6l	87	80.182	ENSPPAG00000030178	-	99	80.545	Pan_paniscus
ENSELUG00000013353	cnot6l	81	78.538	ENSPPAG00000034242	-	99	79.009	Pan_paniscus
ENSELUG00000013353	cnot6l	88	83.032	ENSPPRG00000008857	CNOT6L	99	83.394	Panthera_pardus
ENSELUG00000013353	cnot6l	88	83.032	ENSPTIG00000015698	CNOT6L	99	83.394	Panthera_tigris_altaica
ENSELUG00000013353	cnot6l	88	83.094	ENSPTRG00000016198	CNOT6L	99	83.394	Pan_troglodytes
ENSELUG00000013353	cnot6l	80	78.774	ENSPTRG00000045291	-	99	79.245	Pan_troglodytes
ENSELUG00000013353	cnot6l	88	83.094	ENSPANG00000007831	CNOT6L	99	83.394	Papio_anubis
ENSELUG00000013353	cnot6l	87	89.455	ENSPKIG00000002892	cnot6l	99	89.455	Paramormyrops_kingsleyae
ENSELUG00000013353	cnot6l	88	83.032	ENSPSIG00000016241	CNOT6L	99	83.574	Pelodiscus_sinensis
ENSELUG00000013353	cnot6l	87	85.348	ENSPMGG00000004021	cnot6l	99	85.348	Periophthalmus_magnuspinnatus
ENSELUG00000013353	cnot6l	87	82.000	ENSPEMG00000011554	Cnot6l	99	82.364	Peromyscus_maniculatus_bairdii
ENSELUG00000013353	cnot6l	88	69.489	ENSPMAG00000005706	cnot6l	99	70.194	Petromyzon_marinus
ENSELUG00000013353	cnot6l	87	82.000	ENSPCIG00000027504	-	99	82.364	Phascolarctos_cinereus
ENSELUG00000013353	cnot6l	87	90.580	ENSPFOG00000013163	cnot6l	99	90.580	Poecilia_formosa
ENSELUG00000013353	cnot6l	87	90.399	ENSPLAG00000019862	cnot6l	99	90.399	Poecilia_latipinna
ENSELUG00000013353	cnot6l	87	90.399	ENSPMEG00000015834	cnot6l	99	90.399	Poecilia_mexicana
ENSELUG00000013353	cnot6l	87	90.217	ENSPREG00000003561	cnot6l	99	90.217	Poecilia_reticulata
ENSELUG00000013353	cnot6l	87	83.091	ENSPPYG00000014869	CNOT6L	99	83.455	Pongo_abelii
ENSELUG00000013353	cnot6l	88	54.152	ENSPCAG00000016617	CNOT6L	81	87.805	Procavia_capensis
ENSELUG00000013353	cnot6l	88	83.094	ENSPCOG00000014669	CNOT6L	99	83.394	Propithecus_coquereli
ENSELUG00000013353	cnot6l	73	85.366	ENSPVAG00000002690	CNOT6L	79	85.366	Pteropus_vampyrus
ENSELUG00000013353	cnot6l	80	88.340	ENSPNYG00000006717	cnot6l	92	89.328	Pundamilia_nyererei
ENSELUG00000013353	cnot6l	87	88.727	ENSPNAG00000003537	cnot6l	98	88.727	Pygocentrus_nattereri
ENSELUG00000013353	cnot6l	87	82.000	ENSRNOG00000002075	Cnot6l	99	82.364	Rattus_norvegicus
ENSELUG00000013353	cnot6l	88	82.640	ENSRBIG00000027644	CNOT6L	99	83.002	Rhinopithecus_bieti
ENSELUG00000013353	cnot6l	88	82.554	ENSRROG00000031003	CNOT6L	99	83.273	Rhinopithecus_roxellana
ENSELUG00000013353	cnot6l	87	83.091	ENSSBOG00000028521	CNOT6L	99	83.455	Saimiri_boliviensis_boliviensis
ENSELUG00000013353	cnot6l	88	82.671	ENSSHAG00000006072	CNOT6L	99	83.032	Sarcophilus_harrisii
ENSELUG00000013353	cnot6l	87	88.364	ENSSFOG00015019044	cnot6l	99	88.364	Scleropages_formosus
ENSELUG00000013353	cnot6l	87	88.406	ENSSMAG00000015568	cnot6l	99	88.406	Scophthalmus_maximus
ENSELUG00000013353	cnot6l	87	92.391	ENSSDUG00000018426	cnot6l	99	92.391	Seriola_dumerili
ENSELUG00000013353	cnot6l	87	92.391	ENSSLDG00000000335	cnot6l	99	92.391	Seriola_lalandi_dorsalis
ENSELUG00000013353	cnot6l	87	82.396	ENSSPUG00000002016	CNOT6L	99	82.396	Sphenodon_punctatus
ENSELUG00000013353	cnot6l	87	91.848	ENSSPAG00000022932	cnot6l	99	92.754	Stegastes_partitus
ENSELUG00000013353	cnot6l	88	83.032	ENSSSCG00000008989	CNOT6L	99	83.455	Sus_scrofa
ENSELUG00000013353	cnot6l	88	82.821	ENSTGUG00000001737	-	99	83.183	Taeniopygia_guttata
ENSELUG00000013353	cnot6l	87	91.123	ENSTRUG00000004332	cnot6l	99	91.123	Takifugu_rubripes
ENSELUG00000013353	cnot6l	87	89.674	ENSTNIG00000016717	cnot6l	99	89.674	Tetraodon_nigroviridis
ENSELUG00000013353	cnot6l	77	78.763	ENSTBEG00000016519	CNOT6L	97	78.763	Tupaia_belangeri
ENSELUG00000013353	cnot6l	77	83.505	ENSTTRG00000005606	CNOT6L	100	83.505	Tursiops_truncatus
ENSELUG00000013353	cnot6l	87	82.909	ENSUAMG00000026982	CNOT6L	99	83.273	Ursus_americanus
ENSELUG00000013353	cnot6l	88	82.852	ENSUMAG00000007955	CNOT6L	99	83.213	Ursus_maritimus
ENSELUG00000013353	cnot6l	88	79.747	ENSVPAG00000010892	CNOT6L	99	80.108	Vicugna_pacos
ENSELUG00000013353	cnot6l	88	83.032	ENSVVUG00000024858	CNOT6L	99	87.278	Vulpes_vulpes
ENSELUG00000013353	cnot6l	88	81.555	ENSXETG00000000372	cnot6l	99	81.555	Xenopus_tropicalis
ENSELUG00000013353	cnot6l	87	90.399	ENSXMAG00000002900	cnot6l	99	90.399	Xiphophorus_maculatus