EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000013388 (Gene tree)
Gene ID: 105016528
Gene Symbol: sltm
Alias: wu:fd12b08|zgc:65985
Full Name: SAFB like transcription modulator
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 24732 bases
Position: chrLG02:14079001-14103732
Accession: 105016528
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000013218	RRM_5	PF13893.6	9.5e-08	1	1
ENSELUP00000034708	RRM_5	PF13893.6	1.1e-07	1	1
ENSELUP00000013218	RRM_1	PF00076.22	3e-10	1	1
ENSELUP00000034708	RRM_1	PF00076.22	3.2e-10	1	1
ENSELUP00000034708	SAP	PF02037.27	2.6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000021716	-	3513	XM_010880428	ENSELUP00000034708	1170 (aa)	XP_010878730	UPI000661CDE3
ENSELUT00000021704	-	3385	-	ENSELUP00000013218	1087 (aa)	-	-

Gene Model

Click here to download ENSELUG00000013388's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000013388's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000013388	sltm	97	54.234	ENSG00000137776	SLTM	100	60.356	Homo_sapiens
ENSELUG00000013388	sltm	70	68.250	ENSAPOG00000012346	sltm	77	66.625	Acanthochromis_polyacanthus
ENSELUG00000013388	sltm	94	53.237	ENSAMEG00000004537	SLTM	100	54.471	Ailuropoda_melanoleuca
ENSELUG00000013388	sltm	74	67.219	ENSACIG00000001971	sltm	95	68.817	Amphilophus_citrinellus
ENSELUG00000013388	sltm	73	66.999	ENSAOCG00000002747	sltm	77	66.501	Amphiprion_ocellaris
ENSELUG00000013388	sltm	70	67.123	ENSAPEG00000012366	sltm	77	66.625	Amphiprion_percula
ENSELUG00000013388	sltm	75	68.844	ENSATEG00000003763	sltm	79	65.505	Anabas_testudineus
ENSELUG00000013388	sltm	91	54.321	ENSAPLG00000013025	SLTM	79	50.769	Anas_platyrhynchos
ENSELUG00000013388	sltm	90	51.446	ENSACAG00000015120	SLTM	98	47.142	Anolis_carolinensis
ENSELUG00000013388	sltm	97	53.312	ENSANAG00000037031	SLTM	99	53.906	Aotus_nancymaae
ENSELUG00000013388	sltm	70	64.330	ENSACLG00000002523	sltm	77	61.702	Astatotilapia_calliptera
ENSELUG00000013388	sltm	74	66.170	ENSAMXG00000012409	sltm	84	65.179	Astyanax_mexicanus
ENSELUG00000013388	sltm	76	68.493	ENSBTAG00000011319	SLTM	99	59.804	Bos_taurus
ENSELUG00000013388	sltm	97	53.491	ENSCJAG00000020395	SLTM	99	53.872	Callithrix_jacchus
ENSELUG00000013388	sltm	82	60.174	ENSCAFG00000016586	SLTM	99	48.040	Canis_familiaris
ENSELUG00000013388	sltm	81	79.661	ENSCAFG00020011253	SLTM	99	62.580	Canis_lupus_dingo
ENSELUG00000013388	sltm	86	54.251	ENSCHIG00000008780	SLTM	99	53.795	Capra_hircus
ENSELUG00000013388	sltm	94	52.902	ENSTSYG00000013581	SLTM	95	53.783	Carlito_syrichta
ENSELUG00000013388	sltm	70	56.182	ENSCAPG00000013326	SLTM	77	55.677	Cavia_aperea
ENSELUG00000013388	sltm	82	53.882	ENSCPOG00000026109	SLTM	94	54.430	Cavia_porcellus
ENSELUG00000013388	sltm	97	53.805	ENSCCAG00000022982	SLTM	60	89.189	Cebus_capucinus
ENSELUG00000013388	sltm	95	54.126	ENSCATG00000030254	SLTM	99	54.627	Cercocebus_atys
ENSELUG00000013388	sltm	83	52.889	ENSCLAG00000007160	SLTM	93	53.656	Chinchilla_lanigera
ENSELUG00000013388	sltm	95	54.126	ENSCSAG00000012004	SLTM	99	54.627	Chlorocebus_sabaeus
ENSELUG00000013388	sltm	66	59.615	ENSCHOG00000001125	SLTM	77	76.190	Choloepus_hoffmanni
ENSELUG00000013388	sltm	86	82.812	ENSCPBG00000006045	SLTM	95	65.979	Chrysemys_picta_bellii
ENSELUG00000013388	sltm	92	52.567	ENSCANG00000043731	SLTM	100	53.546	Colobus_angolensis_palliatus
ENSELUG00000013388	sltm	94	47.485	ENSCGRG00001022009	Sltm	99	48.290	Cricetulus_griseus_chok1gshd
ENSELUG00000013388	sltm	96	47.602	ENSCGRG00000014806	Sltm	100	47.602	Cricetulus_griseus_crigri
ENSELUG00000013388	sltm	73	62.366	ENSCSEG00000001618	sltm	73	64.121	Cynoglossus_semilaevis
ENSELUG00000013388	sltm	71	77.907	ENSDARG00000052728	sltm	92	78.629	Danio_rerio
ENSELUG00000013388	sltm	99	48.774	ENSDNOG00000002975	SLTM	99	54.667	Dasypus_novemcinctus
ENSELUG00000013388	sltm	77	65.403	ENSDORG00000007463	Sltm	93	69.643	Dipodomys_ordii
ENSELUG00000013388	sltm	70	46.625	ENSETEG00000008003	SLTM	98	47.187	Echinops_telfairi
ENSELUG00000013388	sltm	90	54.871	ENSEASG00005006792	SLTM	99	54.849	Equus_asinus_asinus
ENSELUG00000013388	sltm	68	80.702	ENSECAG00000011267	SLTM	93	62.287	Equus_caballus
ENSELUG00000013388	sltm	79	62.620	ENSEEUG00000000580	SLTM	91	55.409	Erinaceus_europaeus
ENSELUG00000013388	sltm	87	79.661	ENSFCAG00000004826	SLTM	99	55.034	Felis_catus
ENSELUG00000013388	sltm	90	51.111	ENSFALG00000012285	SLTM	79	50.648	Ficedula_albicollis
ENSELUG00000013388	sltm	96	48.469	ENSFDAG00000018075	SLTM	93	55.836	Fukomys_damarensis
ENSELUG00000013388	sltm	78	56.140	ENSFHEG00000014764	sltm	97	58.155	Fundulus_heteroclitus
ENSELUG00000013388	sltm	66	84.444	ENSGMOG00000015455	sltm	75	76.364	Gadus_morhua
ENSELUG00000013388	sltm	66	66.622	ENSGACG00000015814	sltm	64	68.383	Gasterosteus_aculeatus
ENSELUG00000013388	sltm	84	81.395	ENSGAGG00000021279	SLTM	75	64.078	Gopherus_agassizii
ENSELUG00000013388	sltm	97	54.234	ENSGGOG00000015866	SLTM	65	89.189	Gorilla_gorilla
ENSELUG00000013388	sltm	70	64.456	ENSHBUG00000012461	sltm	77	61.827	Haplochromis_burtoni
ENSELUG00000013388	sltm	99	48.612	ENSHGLG00000018512	-	99	48.161	Heterocephalus_glaber_female
ENSELUG00000013388	sltm	78	47.390	ENSHGLG00000015426	-	50	53.790	Heterocephalus_glaber_female
ENSELUG00000013388	sltm	76	51.185	ENSHGLG00100001757	-	59	54.299	Heterocephalus_glaber_male
ENSELUG00000013388	sltm	93	39.927	ENSHGLG00100002576	-	82	41.194	Heterocephalus_glaber_male
ENSELUG00000013388	sltm	99	45.047	ENSHGLG00100002674	-	99	44.444	Heterocephalus_glaber_male
ENSELUG00000013388	sltm	84	53.695	ENSHCOG00000003395	sltm	73	58.728	Hippocampus_comes
ENSELUG00000013388	sltm	92	77.419	ENSIPUG00000023201	sltm	78	77.419	Ictalurus_punctatus
ENSELUG00000013388	sltm	93	54.851	ENSSTOG00000000584	SLTM	100	53.601	Ictidomys_tridecemlineatus
ENSELUG00000013388	sltm	99	47.639	ENSJJAG00000006970	Sltm	99	48.198	Jaculus_jaculus
ENSELUG00000013388	sltm	87	70.270	ENSKMAG00000007570	sltm	88	70.270	Kryptolebias_marmoratus
ENSELUG00000013388	sltm	89	67.742	ENSLBEG00000025472	sltm	100	67.742	Labrus_bergylta
ENSELUG00000013388	sltm	94	53.682	ENSLACG00000005234	SLTM	98	53.931	Latimeria_chalumnae
ENSELUG00000013388	sltm	91	72.043	ENSLOCG00000013629	sltm	100	72.043	Lepisosteus_oculatus
ENSELUG00000013388	sltm	94	54.644	ENSLAFG00000017922	SLTM	98	53.889	Loxodonta_africana
ENSELUG00000013388	sltm	95	54.126	ENSMFAG00000033354	SLTM	98	54.627	Macaca_fascicularis
ENSELUG00000013388	sltm	95	54.126	ENSMMUG00000022200	SLTM	98	60.784	Macaca_mulatta
ENSELUG00000013388	sltm	95	54.019	ENSMNEG00000025105	SLTM	98	54.515	Macaca_nemestrina
ENSELUG00000013388	sltm	95	54.555	ENSMLEG00000043355	SLTM	82	70.588	Mandrillus_leucophaeus
ENSELUG00000013388	sltm	70	67.254	ENSMAMG00000021391	sltm	77	67.380	Mastacembelus_armatus
ENSELUG00000013388	sltm	70	64.330	ENSMZEG00005013839	sltm	77	61.702	Maylandia_zebra
ENSELUG00000013388	sltm	75	51.991	ENSMGAG00000005313	SLTM	79	50.408	Meleagris_gallopavo
ENSELUG00000013388	sltm	68	65.385	ENSMAUG00000014391	Sltm	99	62.069	Mesocricetus_auratus
ENSELUG00000013388	sltm	97	54.126	ENSMICG00000013069	SLTM	99	53.093	Microcebus_murinus
ENSELUG00000013388	sltm	93	46.686	ENSMOCG00000012419	Sltm	99	48.336	Microtus_ochrogaster
ENSELUG00000013388	sltm	89	63.212	ENSMMOG00000016470	sltm	84	60.178	Mola_mola
ENSELUG00000013388	sltm	96	52.614	ENSMODG00000008794	-	77	63.220	Monodelphis_domestica
ENSELUG00000013388	sltm	89	68.817	ENSMALG00000021474	sltm	77	68.090	Monopterus_albus
ENSELUG00000013388	sltm	92	48.246	MGP_CAROLIEiJ_G0032404	Sltm	99	47.873	Mus_caroli
ENSELUG00000013388	sltm	92	47.222	ENSMUSG00000032212	Sltm	99	48.120	Mus_musculus
ENSELUG00000013388	sltm	92	47.438	MGP_PahariEiJ_G0015268	Sltm	99	48.037	Mus_pahari
ENSELUG00000013388	sltm	92	47.007	MGP_SPRETEiJ_G0033542	Sltm	99	47.913	Mus_spretus
ENSELUG00000013388	sltm	98	47.337	ENSMPUG00000004229	SLTM	76	53.917	Mustela_putorius_furo
ENSELUG00000013388	sltm	83	52.839	ENSMLUG00000000742	SLTM	79	53.412	Myotis_lucifugus
ENSELUG00000013388	sltm	98	53.158	ENSNGAG00000012328	Sltm	99	48.744	Nannospalax_galili
ENSELUG00000013388	sltm	97	54.234	ENSNLEG00000011440	SLTM	99	54.627	Nomascus_leucogenys
ENSELUG00000013388	sltm	83	68.966	ENSMEUG00000015230	SLTM	68	64.706	Notamacropus_eugenii
ENSELUG00000013388	sltm	96	48.264	ENSODEG00000017077	SLTM	99	48.055	Octodon_degus
ENSELUG00000013388	sltm	81	59.457	ENSONIG00000005838	sltm	77	61.827	Oreochromis_niloticus
ENSELUG00000013388	sltm	82	53.294	ENSOCUG00000003327	SLTM	100	53.927	Oryctolagus_cuniculus
ENSELUG00000013388	sltm	74	64.583	ENSORLG00000008161	sltm	86	64.583	Oryzias_latipes
ENSELUG00000013388	sltm	74	64.583	ENSORLG00020008903	sltm	86	64.583	Oryzias_latipes_hni
ENSELUG00000013388	sltm	73	64.583	ENSORLG00015007103	sltm	86	64.583	Oryzias_latipes_hsok
ENSELUG00000013388	sltm	70	61.274	ENSOMEG00000002041	sltm	83	61.450	Oryzias_melastigma
ENSELUG00000013388	sltm	78	53.805	ENSOGAG00000011297	SLTM	99	48.287	Otolemur_garnettii
ENSELUG00000013388	sltm	87	54.435	ENSOARG00000020844	SLTM	99	55.169	Ovis_aries
ENSELUG00000013388	sltm	97	53.162	ENSPPAG00000029308	SLTM	99	54.213	Pan_paniscus
ENSELUG00000013388	sltm	88	57.790	ENSPPRG00000012400	SLTM	99	54.939	Panthera_pardus
ENSELUG00000013388	sltm	94	52.679	ENSPTIG00000021933	SLTM	95	54.118	Panthera_tigris_altaica
ENSELUG00000013388	sltm	97	54.234	ENSPTRG00000007121	SLTM	99	54.627	Pan_troglodytes
ENSELUG00000013388	sltm	95	53.155	ENSPANG00000017193	SLTM	82	70.588	Papio_anubis
ENSELUG00000013388	sltm	87	86.000	ENSPKIG00000022760	sltm	100	86.000	Paramormyrops_kingsleyae
ENSELUG00000013388	sltm	99	49.404	ENSPSIG00000005489	SLTM	96	51.409	Pelodiscus_sinensis
ENSELUG00000013388	sltm	79	71.622	ENSPMGG00000006037	sltm	100	56.978	Periophthalmus_magnuspinnatus
ENSELUG00000013388	sltm	99	48.101	ENSPEMG00000013263	Sltm	99	48.290	Peromyscus_maniculatus_bairdii
ENSELUG00000013388	sltm	96	55.482	ENSPCIG00000028356	SLTM	99	53.375	Phascolarctos_cinereus
ENSELUG00000013388	sltm	78	59.792	ENSPFOG00000004372	sltm	81	57.760	Poecilia_formosa
ENSELUG00000013388	sltm	75	57.107	ENSPLAG00000008000	sltm	78	60.076	Poecilia_latipinna
ENSELUG00000013388	sltm	72	65.217	ENSPMEG00000006047	sltm	77	60.382	Poecilia_mexicana
ENSELUG00000013388	sltm	64	60.385	ENSPREG00000023236	sltm	78	59.899	Poecilia_reticulata
ENSELUG00000013388	sltm	97	52.947	ENSPPYG00000006515	SLTM	99	53.512	Pongo_abelii
ENSELUG00000013388	sltm	96	48.330	ENSPCAG00000013482	SLTM	99	46.524	Procavia_capensis
ENSELUG00000013388	sltm	97	55.080	ENSPCOG00000010624	SLTM	99	54.616	Propithecus_coquereli
ENSELUG00000013388	sltm	85	86.486	ENSPVAG00000015056	SLTM	99	47.078	Pteropus_vampyrus
ENSELUG00000013388	sltm	70	64.581	ENSPNYG00000013893	sltm	77	61.952	Pundamilia_nyererei
ENSELUG00000013388	sltm	89	79.070	ENSPNAG00000020563	sltm	98	77.419	Pygocentrus_nattereri
ENSELUG00000013388	sltm	92	46.999	ENSRNOG00000054446	Sltm	99	48.287	Rattus_norvegicus
ENSELUG00000013388	sltm	96	48.203	ENSRBIG00000029226	SLTM	99	53.664	Rhinopithecus_bieti
ENSELUG00000013388	sltm	95	59.593	ENSRROG00000045301	SLTM	94	61.722	Rhinopithecus_roxellana
ENSELUG00000013388	sltm	87	81.356	ENSSBOG00000018883	SLTM	99	54.404	Saimiri_boliviensis_boliviensis
ENSELUG00000013388	sltm	86	60.744	ENSSHAG00000015395	SLTM	99	54.363	Sarcophilus_harrisii
ENSELUG00000013388	sltm	70	64.551	ENSSMAG00000000355	sltm	64	70.791	Scophthalmus_maximus
ENSELUG00000013388	sltm	74	66.502	ENSSDUG00000018134	sltm	66	72.950	Seriola_dumerili
ENSELUG00000013388	sltm	75	66.255	ENSSLDG00000013907	sltm	66	70.899	Seriola_lalandi_dorsalis
ENSELUG00000013388	sltm	74	66.265	ENSSPAG00000008130	sltm	65	71.897	Stegastes_partitus
ENSELUG00000013388	sltm	80	79.661	ENSSSCG00000004592	SLTM	99	61.404	Sus_scrofa
ENSELUG00000013388	sltm	84	58.872	ENSTGUG00000006017	SLTM	74	53.600	Taeniopygia_guttata
ENSELUG00000013388	sltm	83	59.310	ENSTRUG00000017767	sltm	68	60.580	Takifugu_rubripes
ENSELUG00000013388	sltm	83	58.006	ENSTNIG00000009334	sltm	64	57.308	Tetraodon_nigroviridis
ENSELUG00000013388	sltm	64	51.143	ENSTBEG00000000945	SLTM	88	56.322	Tupaia_belangeri
ENSELUG00000013388	sltm	97	53.537	ENSTTRG00000005246	SLTM	99	48.164	Tursiops_truncatus
ENSELUG00000013388	sltm	81	60.857	ENSUAMG00000025901	SLTM	99	62.758	Ursus_americanus
ENSELUG00000013388	sltm	93	55.224	ENSUMAG00000023678	SLTM	99	62.758	Ursus_maritimus
ENSELUG00000013388	sltm	93	52.602	ENSVPAG00000008606	SLTM	99	51.537	Vicugna_pacos
ENSELUG00000013388	sltm	97	54.019	ENSVVUG00000001450	SLTM	99	55.122	Vulpes_vulpes
ENSELUG00000013388	sltm	85	50.638	ENSXETG00000010840	sltm	58	47.605	Xenopus_tropicalis
ENSELUG00000013388	sltm	70	60.577	ENSXMAG00000014466	sltm	86	59.975	Xiphophorus_maculatus