EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000013398 (Gene tree)
Gene ID: 105017106
Gene Symbol: mrpl20
Alias: RM20
Full Name: mitochondrial ribosomal protein L20
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 3509 bases
Position: chrLG17:19486859-19490367
Accession: 105017106
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000034724	Ribosomal_L20	PF00453.18	3.6e-36	1	1
ENSELUP00000013243	Ribosomal_L20	PF00453.18	1e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000021814	-	2577	-	ENSELUP00000013243	145 (aa)	-	-
ENSELUT00000038435	-	1561	-	ENSELUP00000034724	149 (aa)	-	C1BZT5

Gene Model

Click here to download ENSELUG00000013398's gene model file

Pathways

Pathway ID	Pathway Name	Source
els03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000013398's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000013398	mrpl20	98	69.863	ENSG00000242485	MRPL20	98	69.863	Homo_sapiens
ENSELUG00000013398	mrpl20	100	83.893	ENSAPOG00000011835	mrpl20	100	83.893	Acanthochromis_polyacanthus
ENSELUG00000013398	mrpl20	88	74.046	ENSAMEG00000013932	MRPL20	88	74.046	Ailuropoda_melanoleuca
ENSELUG00000013398	mrpl20	100	84.564	ENSACIG00000019179	mrpl20	100	84.564	Amphilophus_citrinellus
ENSELUG00000013398	mrpl20	100	85.235	ENSAOCG00000007734	mrpl20	100	85.235	Amphiprion_ocellaris
ENSELUG00000013398	mrpl20	100	84.564	ENSAPEG00000014049	mrpl20	100	84.564	Amphiprion_percula
ENSELUG00000013398	mrpl20	100	82.550	ENSATEG00000007369	mrpl20	100	82.550	Anabas_testudineus
ENSELUG00000013398	mrpl20	99	62.838	ENSACAG00000009143	MRPL20	99	62.838	Anolis_carolinensis
ENSELUG00000013398	mrpl20	86	65.625	ENSANAG00000021078	-	84	65.625	Aotus_nancymaae
ENSELUG00000013398	mrpl20	93	84.058	ENSACLG00000021726	mrpl20	88	84.058	Astatotilapia_calliptera
ENSELUG00000013398	mrpl20	99	68.919	ENSAMXG00000035403	mrpl20	99	68.919	Astyanax_mexicanus
ENSELUG00000013398	mrpl20	98	67.123	ENSBTAG00000004872	MRPL20	74	67.123	Bos_taurus
ENSELUG00000013398	mrpl20	98	68.493	ENSCJAG00000039231	-	98	68.493	Callithrix_jacchus
ENSELUG00000013398	mrpl20	98	70.548	ENSCAFG00000019259	MRPL20	98	70.548	Canis_familiaris
ENSELUG00000013398	mrpl20	96	56.164	ENSCAFG00020025880	-	77	56.164	Canis_lupus_dingo
ENSELUG00000013398	mrpl20	97	67.586	ENSCHIG00000010545	MRPL20	97	67.586	Capra_hircus
ENSELUG00000013398	mrpl20	98	72.603	ENSTSYG00000033620	MRPL20	98	72.603	Carlito_syrichta
ENSELUG00000013398	mrpl20	98	69.178	ENSCPOG00000023001	MRPL20	98	69.178	Cavia_porcellus
ENSELUG00000013398	mrpl20	98	68.493	ENSCCAG00000032768	-	98	68.493	Cebus_capucinus
ENSELUG00000013398	mrpl20	98	70.548	ENSCATG00000033927	MRPL20	98	70.548	Cercocebus_atys
ENSELUG00000013398	mrpl20	84	59.200	ENSCATG00000040437	-	65	59.200	Cercocebus_atys
ENSELUG00000013398	mrpl20	98	48.630	ENSCLAG00000011866	-	97	48.630	Chinchilla_lanigera
ENSELUG00000013398	mrpl20	98	67.808	ENSCLAG00000009757	-	98	67.808	Chinchilla_lanigera
ENSELUG00000013398	mrpl20	98	70.548	ENSCSAG00000000688	-	98	70.548	Chlorocebus_sabaeus
ENSELUG00000013398	mrpl20	98	69.178	ENSCSAG00000019479	-	98	69.178	Chlorocebus_sabaeus
ENSELUG00000013398	mrpl20	98	67.808	ENSCPBG00000022905	MRPL20	98	67.808	Chrysemys_picta_bellii
ENSELUG00000013398	mrpl20	98	54.795	ENSCANG00000039625	MRPL20	98	54.795	Colobus_angolensis_palliatus
ENSELUG00000013398	mrpl20	98	69.863	ENSCGRG00001024028	Mrpl20	98	69.863	Cricetulus_griseus_chok1gshd
ENSELUG00000013398	mrpl20	98	69.863	ENSCGRG00000007447	Mrpl20	98	69.863	Cricetulus_griseus_crigri
ENSELUG00000013398	mrpl20	100	81.208	ENSCSEG00000002016	mrpl20	87	81.208	Cynoglossus_semilaevis
ENSELUG00000013398	mrpl20	98	81.507	ENSCVAG00000022768	mrpl20	99	81.507	Cyprinodon_variegatus
ENSELUG00000013398	mrpl20	100	77.852	ENSDARG00000090462	mrpl20	100	77.852	Danio_rerio
ENSELUG00000013398	mrpl20	98	70.548	ENSDNOG00000044958	MRPL20	98	70.548	Dasypus_novemcinctus
ENSELUG00000013398	mrpl20	54	67.500	ENSDORG00000028591	Mrpl20	96	67.500	Dipodomys_ordii
ENSELUG00000013398	mrpl20	83	43.089	FBgn0036335	mRpL20	82	43.089	Drosophila_melanogaster
ENSELUG00000013398	mrpl20	98	56.164	ENSETEG00000012315	MRPL20	98	56.164	Echinops_telfairi
ENSELUG00000013398	mrpl20	98	63.014	ENSEBUG00000002214	mrpl20	98	63.014	Eptatretus_burgeri
ENSELUG00000013398	mrpl20	98	71.233	ENSEASG00005014515	MRPL20	98	71.233	Equus_asinus_asinus
ENSELUG00000013398	mrpl20	98	71.233	ENSECAG00000018364	MRPL20	98	71.233	Equus_caballus
ENSELUG00000013398	mrpl20	79	53.846	ENSEEUG00000004596	-	98	53.846	Erinaceus_europaeus
ENSELUG00000013398	mrpl20	98	70.548	ENSFCAG00000033203	MRPL20	98	70.548	Felis_catus
ENSELUG00000013398	mrpl20	98	63.699	ENSFALG00000009334	MRPL20	98	63.699	Ficedula_albicollis
ENSELUG00000013398	mrpl20	98	68.493	ENSFDAG00000013320	MRPL20	98	68.493	Fukomys_damarensis
ENSELUG00000013398	mrpl20	98	78.082	ENSFHEG00000004769	mrpl20	99	78.082	Fundulus_heteroclitus
ENSELUG00000013398	mrpl20	97	79.861	ENSGMOG00000008125	mrpl20	100	79.861	Gadus_morhua
ENSELUG00000013398	mrpl20	98	63.014	ENSGALG00000001542	MRPL20	98	63.014	Gallus_gallus
ENSELUG00000013398	mrpl20	98	82.192	ENSGAFG00000021580	mrpl20	99	82.192	Gambusia_affinis
ENSELUG00000013398	mrpl20	100	83.893	ENSGACG00000001134	mrpl20	100	83.893	Gasterosteus_aculeatus
ENSELUG00000013398	mrpl20	98	67.123	ENSGAGG00000001945	MRPL20	98	67.123	Gopherus_agassizii
ENSELUG00000013398	mrpl20	98	69.863	ENSGGOG00000027251	-	98	69.863	Gorilla_gorilla
ENSELUG00000013398	mrpl20	100	85.235	ENSHBUG00000023626	mrpl20	100	85.235	Haplochromis_burtoni
ENSELUG00000013398	mrpl20	98	66.438	ENSHGLG00000017538	MRPL20	98	66.438	Heterocephalus_glaber_female
ENSELUG00000013398	mrpl20	98	67.123	ENSHGLG00100012816	MRPL20	98	67.123	Heterocephalus_glaber_male
ENSELUG00000013398	mrpl20	100	76.510	ENSHCOG00000005830	mrpl20	100	76.510	Hippocampus_comes
ENSELUG00000013398	mrpl20	100	80.537	ENSIPUG00000018055	mrpl20	100	80.537	Ictalurus_punctatus
ENSELUG00000013398	mrpl20	98	70.548	ENSJJAG00000020728	Mrpl20	98	70.548	Jaculus_jaculus
ENSELUG00000013398	mrpl20	100	78.523	ENSKMAG00000021650	mrpl20	100	78.523	Kryptolebias_marmoratus
ENSELUG00000013398	mrpl20	100	83.221	ENSLBEG00000021562	mrpl20	100	83.221	Labrus_bergylta
ENSELUG00000013398	mrpl20	98	76.712	ENSLACG00000019149	MRPL20	98	76.712	Latimeria_chalumnae
ENSELUG00000013398	mrpl20	98	69.863	ENSLAFG00000010706	MRPL20	98	69.863	Loxodonta_africana
ENSELUG00000013398	mrpl20	89	57.895	ENSMFAG00000046195	-	79	57.895	Macaca_fascicularis
ENSELUG00000013398	mrpl20	98	70.548	ENSMFAG00000043214	MRPL20	98	70.548	Macaca_fascicularis
ENSELUG00000013398	mrpl20	98	54.110	ENSMMUG00000038877	MRPL20	71	74.194	Macaca_mulatta
ENSELUG00000013398	mrpl20	98	70.548	ENSMNEG00000041891	MRPL20	98	70.548	Macaca_nemestrina
ENSELUG00000013398	mrpl20	89	57.895	ENSMNEG00000000027	-	68	57.895	Macaca_nemestrina
ENSELUG00000013398	mrpl20	79	71.795	ENSMLEG00000037086	MRPL20	98	71.795	Mandrillus_leucophaeus
ENSELUG00000013398	mrpl20	87	58.140	ENSMLEG00000037605	-	79	58.140	Mandrillus_leucophaeus
ENSELUG00000013398	mrpl20	100	84.564	ENSMAMG00000023884	mrpl20	100	84.564	Mastacembelus_armatus
ENSELUG00000013398	mrpl20	100	85.235	ENSMZEG00005011376	mrpl20	100	85.235	Maylandia_zebra
ENSELUG00000013398	mrpl20	89	58.647	ENSMGAG00000002774	MRPL20	90	58.647	Meleagris_gallopavo
ENSELUG00000013398	mrpl20	98	69.178	ENSMAUG00000013299	Mrpl20	98	69.178	Mesocricetus_auratus
ENSELUG00000013398	mrpl20	98	72.603	ENSMICG00000041892	MRPL20	98	72.603	Microcebus_murinus
ENSELUG00000013398	mrpl20	98	65.068	ENSMOCG00000009545	-	98	65.068	Microtus_ochrogaster
ENSELUG00000013398	mrpl20	98	69.863	ENSMOCG00000000404	-	98	69.863	Microtus_ochrogaster
ENSELUG00000013398	mrpl20	100	62.416	ENSMMOG00000021753	mrpl20	100	62.416	Mola_mola
ENSELUG00000013398	mrpl20	100	62.416	ENSMODG00000006562	MRPL20	100	62.416	Monodelphis_domestica
ENSELUG00000013398	mrpl20	100	83.893	ENSMALG00000018593	mrpl20	100	83.893	Monopterus_albus
ENSELUG00000013398	mrpl20	98	71.233	MGP_CAROLIEiJ_G0026904	Mrpl20	100	70.833	Mus_caroli
ENSELUG00000013398	mrpl20	98	71.918	ENSMUSG00000029066	Mrpl20	100	71.875	Mus_musculus
ENSELUG00000013398	mrpl20	98	67.808	MGP_PahariEiJ_G0029252	Mrpl20	98	67.808	Mus_pahari
ENSELUG00000013398	mrpl20	98	71.918	MGP_SPRETEiJ_G0027898	Mrpl20	100	71.875	Mus_spretus
ENSELUG00000013398	mrpl20	98	68.493	ENSMLUG00000011857	MRPL20	98	68.493	Myotis_lucifugus
ENSELUG00000013398	mrpl20	98	69.178	ENSNGAG00000021688	Mrpl20	98	69.178	Nannospalax_galili
ENSELUG00000013398	mrpl20	100	85.235	ENSNBRG00000006018	mrpl20	100	85.235	Neolamprologus_brichardi
ENSELUG00000013398	mrpl20	54	68.750	ENSNLEG00000013868	-	78	68.750	Nomascus_leucogenys
ENSELUG00000013398	mrpl20	98	69.178	ENSODEG00000010734	MRPL20	98	69.178	Octodon_degus
ENSELUG00000013398	mrpl20	100	85.906	ENSONIG00000018914	mrpl20	100	85.906	Oreochromis_niloticus
ENSELUG00000013398	mrpl20	100	79.866	ENSORLG00000018304	mrpl20	100	79.866	Oryzias_latipes
ENSELUG00000013398	mrpl20	100	79.866	ENSORLG00020009128	mrpl20	100	79.866	Oryzias_latipes_hni
ENSELUG00000013398	mrpl20	100	79.866	ENSORLG00015005156	mrpl20	100	79.866	Oryzias_latipes_hsok
ENSELUG00000013398	mrpl20	100	82.550	ENSOMEG00000015654	mrpl20	100	82.550	Oryzias_melastigma
ENSELUG00000013398	mrpl20	98	69.178	ENSOGAG00000005968	MRPL20	98	69.178	Otolemur_garnettii
ENSELUG00000013398	mrpl20	97	67.586	ENSOARG00000003529	MRPL20	97	67.586	Ovis_aries
ENSELUG00000013398	mrpl20	98	69.863	ENSPPAG00000042350	-	98	69.863	Pan_paniscus
ENSELUG00000013398	mrpl20	98	71.233	ENSPPRG00000009188	MRPL20	98	71.233	Panthera_pardus
ENSELUG00000013398	mrpl20	54	68.750	ENSPTIG00000020769	MRPL20	89	67.901	Panthera_tigris_altaica
ENSELUG00000013398	mrpl20	98	69.863	ENSPTRG00000000029	MRPL20	98	69.863	Pan_troglodytes
ENSELUG00000013398	mrpl20	98	70.548	ENSPANG00000015802	MRPL20	98	70.548	Papio_anubis
ENSELUG00000013398	mrpl20	92	56.204	ENSPANG00000036197	-	98	56.204	Papio_anubis
ENSELUG00000013398	mrpl20	98	76.712	ENSPKIG00000002248	mrpl20	98	76.712	Paramormyrops_kingsleyae
ENSELUG00000013398	mrpl20	93	57.971	ENSPSIG00000003939	MRPL20	97	57.971	Pelodiscus_sinensis
ENSELUG00000013398	mrpl20	50	38.961	ENSPMGG00000022271	-	73	31.731	Periophthalmus_magnuspinnatus
ENSELUG00000013398	mrpl20	100	85.906	ENSPMGG00000003966	mrpl20	100	85.906	Periophthalmus_magnuspinnatus
ENSELUG00000013398	mrpl20	98	54.110	ENSPEMG00000009458	-	83	54.110	Peromyscus_maniculatus_bairdii
ENSELUG00000013398	mrpl20	61	41.758	ENSPMAG00000009990	-	72	41.758	Petromyzon_marinus
ENSELUG00000013398	mrpl20	100	63.758	ENSPCIG00000007747	MRPL20	100	63.758	Phascolarctos_cinereus
ENSELUG00000013398	mrpl20	98	80.137	ENSPFOG00000018163	mrpl20	99	80.137	Poecilia_formosa
ENSELUG00000013398	mrpl20	98	80.137	ENSPLAG00000016451	mrpl20	99	80.137	Poecilia_latipinna
ENSELUG00000013398	mrpl20	98	80.822	ENSPMEG00000002561	mrpl20	99	80.822	Poecilia_mexicana
ENSELUG00000013398	mrpl20	98	74.150	ENSPREG00000004925	mrpl20	99	74.830	Poecilia_reticulata
ENSELUG00000013398	mrpl20	98	72.603	ENSPCAG00000001425	MRPL20	98	72.603	Procavia_capensis
ENSELUG00000013398	mrpl20	97	65.517	ENSPCOG00000004450	-	97	65.517	Propithecus_coquereli
ENSELUG00000013398	mrpl20	98	73.288	ENSPCOG00000025653	-	98	73.288	Propithecus_coquereli
ENSELUG00000013398	mrpl20	100	85.235	ENSPNYG00000008626	mrpl20	100	85.235	Pundamilia_nyererei
ENSELUG00000013398	mrpl20	100	82.550	ENSPNAG00000016694	mrpl20	100	82.550	Pygocentrus_nattereri
ENSELUG00000013398	mrpl20	98	70.548	ENSRNOG00000018647	Mrpl20	98	70.548	Rattus_norvegicus
ENSELUG00000013398	mrpl20	98	69.863	ENSRBIG00000042278	MRPL20	98	69.863	Rhinopithecus_bieti
ENSELUG00000013398	mrpl20	98	69.863	ENSRROG00000003574	MRPL20	98	69.863	Rhinopithecus_roxellana
ENSELUG00000013398	mrpl20	54	62.500	ENSSBOG00000035454	-	96	62.500	Saimiri_boliviensis_boliviensis
ENSELUG00000013398	mrpl20	100	55.484	ENSSHAG00000008197	MRPL20	100	55.484	Sarcophilus_harrisii
ENSELUG00000013398	mrpl20	98	79.452	ENSSFOG00015016009	mrpl20	98	79.452	Scleropages_formosus
ENSELUG00000013398	mrpl20	100	83.893	ENSSMAG00000000214	mrpl20	100	83.893	Scophthalmus_maximus
ENSELUG00000013398	mrpl20	100	85.235	ENSSDUG00000008646	mrpl20	100	85.235	Seriola_dumerili
ENSELUG00000013398	mrpl20	100	83.893	ENSSLDG00000023171	mrpl20	100	83.893	Seriola_lalandi_dorsalis
ENSELUG00000013398	mrpl20	98	66.438	ENSSPUG00000016911	MRPL20	98	66.438	Sphenodon_punctatus
ENSELUG00000013398	mrpl20	100	85.906	ENSSPAG00000012887	mrpl20	100	85.906	Stegastes_partitus
ENSELUG00000013398	mrpl20	98	69.178	ENSSSCG00000033374	MRPL20	98	69.178	Sus_scrofa
ENSELUG00000013398	mrpl20	79	65.254	ENSTGUG00000003113	MRPL20	96	65.254	Taeniopygia_guttata
ENSELUG00000013398	mrpl20	97	83.448	ENSTRUG00000021410	mrpl20	97	83.448	Takifugu_rubripes
ENSELUG00000013398	mrpl20	98	81.507	ENSTNIG00000014657	mrpl20	98	81.507	Tetraodon_nigroviridis
ENSELUG00000013398	mrpl20	98	71.233	ENSTBEG00000008735	MRPL20	98	71.233	Tupaia_belangeri
ENSELUG00000013398	mrpl20	78	69.828	ENSTTRG00000017046	MRPL20	97	69.828	Tursiops_truncatus
ENSELUG00000013398	mrpl20	77	56.140	ENSUAMG00000028406	-	73	56.140	Ursus_americanus
ENSELUG00000013398	mrpl20	98	72.603	ENSUAMG00000012829	-	100	72.165	Ursus_americanus
ENSELUG00000013398	mrpl20	54	68.750	ENSUMAG00000001917	-	70	68.750	Ursus_maritimus
ENSELUG00000013398	mrpl20	78	55.172	ENSUMAG00000003240	-	74	55.172	Ursus_maritimus
ENSELUG00000013398	mrpl20	54	66.250	ENSVPAG00000001846	-	96	66.250	Vicugna_pacos
ENSELUG00000013398	mrpl20	98	71.233	ENSVVUG00000004455	MRPL20	98	71.233	Vulpes_vulpes
ENSELUG00000013398	mrpl20	99	70.748	ENSXETG00000011118	mrpl20	99	70.748	Xenopus_tropicalis
ENSELUG00000013398	mrpl20	98	80.137	ENSXCOG00000004220	mrpl20	99	80.137	Xiphophorus_couchianus
ENSELUG00000013398	mrpl20	98	80.137	ENSXMAG00000016652	mrpl20	99	80.137	Xiphophorus_maculatus