EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000013412 (Gene tree)
Gene ID: 105008571
Gene Symbol: arfrp1
Alias: zgc:113118
Full Name: ADP ribosylation factor related protein 1
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 5688 bases
Position: chrLG17:5052321-5058008
Accession: 105008571
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000013239	MMR_HSR1	PF01926.23	1.9e-07	1	1
ENSELUP00000013244	MMR_HSR1	PF01926.23	1.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000021725	-	2667	XM_010867899	ENSELUP00000013239	201 (aa)	XP_010866201	UPI000577BC5E
ENSELUT00000021729	-	2811	XM_020055585	ENSELUP00000013244	201 (aa)	XP_019911144	UPI000577BC5E

Gene Model

Click here to download ENSELUG00000013412's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000013412's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000013412	arfrp1	85	37.853	ENSELUG00000004400	arl4cb	86	37.853
ENSELUG00000013412	arfrp1	91	35.519	ENSELUG00000018440	arl1	96	35.519
ENSELUG00000013412	arfrp1	90	34.254	ENSELUG00000016704	arl2	93	34.254
ENSELUG00000013412	arfrp1	65	30.075	ENSELUG00000015413	rab1ab	60	30.075
ENSELUG00000013412	arfrp1	91	35.519	ENSELUG00000022533	arf1	75	35.519
ENSELUG00000013412	arfrp1	91	37.097	ENSELUG00000019582	-	96	37.097
ENSELUG00000013412	arfrp1	92	40.761	ENSELUG00000007052	arl5a	97	40.761
ENSELUG00000013412	arfrp1	69	30.935	ENSELUG00000003770	arl8a	70	30.935
ENSELUG00000013412	arfrp1	93	34.759	ENSELUG00000001287	-	98	34.759
ENSELUG00000013412	arfrp1	71	33.099	ENSELUG00000011113	-	61	33.099
ENSELUG00000013412	arfrp1	65	30.827	ENSELUG00000011680	zgc:171927	57	30.827
ENSELUG00000013412	arfrp1	85	35.955	ENSELUG00000015699	arl4ca	88	35.955
ENSELUG00000013412	arfrp1	65	32.090	ENSELUG00000012801	rab13	61	32.090
ENSELUG00000013412	arfrp1	86	33.721	ENSELUG00000003904	arl3l1	86	33.721
ENSELUG00000013412	arfrp1	86	34.884	ENSELUG00000016208	arl3l2	86	34.884
ENSELUG00000013412	arfrp1	91	39.344	ENSELUG00000022956	arl8	96	39.344
ENSELUG00000013412	arfrp1	88	40.113	ENSELUG00000016864	arl5c	93	40.113
ENSELUG00000013412	arfrp1	92	33.155	ENSELUG00000008395	ARF3	96	33.155
ENSELUG00000013412	arfrp1	91	38.251	ENSELUG00000014428	arf4	96	38.251
ENSELUG00000013412	arfrp1	85	31.214	ENSELUG00000002496	-	89	31.214
ENSELUG00000013412	arfrp1	85	37.572	ENSELUG00000023460	-	83	37.572
ENSELUG00000013412	arfrp1	91	35.484	ENSELUG00000007225	-	96	35.484
ENSELUG00000013412	arfrp1	68	35.766	ENSELUG00000000436	-	81	35.766
ENSELUG00000013412	arfrp1	86	34.682	ENSELUG00000013130	-	90	34.682
ENSELUG00000013412	arfrp1	67	31.111	ENSELUG00000010736	arl8a	65	32.061
ENSELUG00000013412	arfrp1	81	34.337	ENSELUG00000024060	-	55	34.337
ENSELUG00000013412	arfrp1	91	34.946	ENSELUG00000019848	arf2a	96	34.946
ENSELUG00000013412	arfrp1	65	30.075	ENSELUG00000012166	RAB1A	57	30.075
ENSELUG00000013412	arfrp1	92	36.757	ENSELUG00000018031	arl3	94	36.757

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000013412	arfrp1	100	84.577	ENSG00000101246	ARFRP1	96	90.517	Homo_sapiens
ENSELUG00000013412	arfrp1	100	95.025	ENSAPOG00000010944	arfrp1	100	95.025	Acanthochromis_polyacanthus
ENSELUG00000013412	arfrp1	100	86.070	ENSAMEG00000001741	ARFRP1	100	86.070	Ailuropoda_melanoleuca
ENSELUG00000013412	arfrp1	100	95.025	ENSACIG00000009740	arfrp1	100	95.025	Amphilophus_citrinellus
ENSELUG00000013412	arfrp1	100	95.025	ENSAOCG00000003286	arfrp1	100	95.025	Amphiprion_ocellaris
ENSELUG00000013412	arfrp1	100	95.025	ENSAPEG00000003601	arfrp1	100	95.025	Amphiprion_percula
ENSELUG00000013412	arfrp1	100	95.025	ENSATEG00000002756	arfrp1	100	95.025	Anabas_testudineus
ENSELUG00000013412	arfrp1	100	88.557	ENSAPLG00000014398	ARFRP1	100	88.557	Anas_platyrhynchos
ENSELUG00000013412	arfrp1	100	88.557	ENSACAG00000013752	ARFRP1	100	88.557	Anolis_carolinensis
ENSELUG00000013412	arfrp1	100	84.080	ENSANAG00000036343	ARFRP1	96	90.517	Aotus_nancymaae
ENSELUG00000013412	arfrp1	100	94.030	ENSACLG00000002442	arfrp1	97	94.030	Astatotilapia_calliptera
ENSELUG00000013412	arfrp1	100	95.522	ENSAMXG00000042798	arfrp1	100	95.522	Astyanax_mexicanus
ENSELUG00000013412	arfrp1	100	85.572	ENSBTAG00000007497	ARFRP1	100	85.572	Bos_taurus
ENSELUG00000013412	arfrp1	93	37.968	WBGene00021841	Y54E10BR.2	96	37.968	Caenorhabditis_elegans
ENSELUG00000013412	arfrp1	100	84.577	ENSCJAG00000010382	ARFRP1	96	90.517	Callithrix_jacchus
ENSELUG00000013412	arfrp1	100	82.587	ENSCAFG00000030493	ARFRP1	100	82.587	Canis_familiaris
ENSELUG00000013412	arfrp1	100	85.075	ENSCAFG00020001953	ARFRP1	100	85.075	Canis_lupus_dingo
ENSELUG00000013412	arfrp1	100	85.572	ENSCHIG00000010007	ARFRP1	100	85.572	Capra_hircus
ENSELUG00000013412	arfrp1	100	84.080	ENSTSYG00000033120	ARFRP1	96	89.655	Carlito_syrichta
ENSELUG00000013412	arfrp1	100	85.572	ENSCPOG00000038193	ARFRP1	100	85.572	Cavia_porcellus
ENSELUG00000013412	arfrp1	100	84.080	ENSCCAG00000022484	ARFRP1	97	89.744	Cebus_capucinus
ENSELUG00000013412	arfrp1	100	84.577	ENSCATG00000039104	ARFRP1	96	90.517	Cercocebus_atys
ENSELUG00000013412	arfrp1	100	85.075	ENSCLAG00000004200	ARFRP1	100	85.075	Chinchilla_lanigera
ENSELUG00000013412	arfrp1	100	84.577	ENSCSAG00000016609	ARFRP1	100	84.577	Chlorocebus_sabaeus
ENSELUG00000013412	arfrp1	100	86.070	ENSCPBG00000014731	ARFRP1	100	86.070	Chrysemys_picta_bellii
ENSELUG00000013412	arfrp1	100	71.642	ENSCING00000024645	-	100	71.642	Ciona_intestinalis
ENSELUG00000013412	arfrp1	100	86.070	ENSCGRG00001001706	Arfrp1	100	86.070	Cricetulus_griseus_chok1gshd
ENSELUG00000013412	arfrp1	100	86.070	ENSCGRG00000014284	Arfrp1	100	86.070	Cricetulus_griseus_crigri
ENSELUG00000013412	arfrp1	100	93.035	ENSCSEG00000013577	arfrp1	100	93.035	Cynoglossus_semilaevis
ENSELUG00000013412	arfrp1	100	94.030	ENSDARG00000057857	arfrp1	100	94.030	Danio_rerio
ENSELUG00000013412	arfrp1	100	84.577	ENSDNOG00000001531	-	67	84.577	Dasypus_novemcinctus
ENSELUG00000013412	arfrp1	100	84.577	ENSDORG00000013488	Arfrp1	100	84.577	Dipodomys_ordii
ENSELUG00000013412	arfrp1	82	30.303	FBgn0038915	CG17819	84	30.303	Drosophila_melanogaster
ENSELUG00000013412	arfrp1	99	65.000	FBgn0030088	Arfrp1	100	65.000	Drosophila_melanogaster
ENSELUG00000013412	arfrp1	97	81.538	ENSEBUG00000013459	arfrp1	81	81.538	Eptatretus_burgeri
ENSELUG00000013412	arfrp1	100	84.080	ENSECAG00000019636	ARFRP1	100	84.080	Equus_caballus
ENSELUG00000013412	arfrp1	100	85.572	ENSFCAG00000044777	ARFRP1	95	91.379	Felis_catus
ENSELUG00000013412	arfrp1	100	88.060	ENSFALG00000005905	ARFRP1	100	88.060	Ficedula_albicollis
ENSELUG00000013412	arfrp1	100	85.075	ENSFDAG00000002842	ARFRP1	100	85.075	Fukomys_damarensis
ENSELUG00000013412	arfrp1	100	92.537	ENSFHEG00000000458	arfrp1	100	92.537	Fundulus_heteroclitus
ENSELUG00000013412	arfrp1	100	93.035	ENSGMOG00000015683	arfrp1	100	93.035	Gadus_morhua
ENSELUG00000013412	arfrp1	100	88.557	ENSGALG00000006101	ARFRP1	100	88.557	Gallus_gallus
ENSELUG00000013412	arfrp1	100	91.542	ENSGAFG00000006962	arfrp1	100	91.542	Gambusia_affinis
ENSELUG00000013412	arfrp1	100	93.035	ENSGACG00000011497	arfrp1	100	93.035	Gasterosteus_aculeatus
ENSELUG00000013412	arfrp1	100	86.070	ENSGAGG00000019506	ARFRP1	100	86.070	Gopherus_agassizii
ENSELUG00000013412	arfrp1	100	84.577	ENSGGOG00000004799	ARFRP1	96	90.517	Gorilla_gorilla
ENSELUG00000013412	arfrp1	100	86.070	ENSHGLG00000012078	ARFRP1	100	86.070	Heterocephalus_glaber_female
ENSELUG00000013412	arfrp1	100	86.070	ENSHGLG00100004198	ARFRP1	100	86.070	Heterocephalus_glaber_male
ENSELUG00000013412	arfrp1	100	86.567	ENSHCOG00000005225	arfrp1	100	86.567	Hippocampus_comes
ENSELUG00000013412	arfrp1	100	93.035	ENSIPUG00000024487	arfrp1	100	93.035	Ictalurus_punctatus
ENSELUG00000013412	arfrp1	100	84.080	ENSSTOG00000011978	ARFRP1	100	84.080	Ictidomys_tridecemlineatus
ENSELUG00000013412	arfrp1	100	85.075	ENSJJAG00000013827	Arfrp1	100	85.075	Jaculus_jaculus
ENSELUG00000013412	arfrp1	100	93.532	ENSKMAG00000016837	arfrp1	100	93.532	Kryptolebias_marmoratus
ENSELUG00000013412	arfrp1	100	94.527	ENSLBEG00000004752	arfrp1	100	94.527	Labrus_bergylta
ENSELUG00000013412	arfrp1	60	90.083	ENSLACG00000001971	ARFRP1	98	93.043	Latimeria_chalumnae
ENSELUG00000013412	arfrp1	100	86.765	ENSLOCG00000001677	arfrp1	100	86.765	Lepisosteus_oculatus
ENSELUG00000013412	arfrp1	100	86.567	ENSLAFG00000010685	ARFRP1	100	86.567	Loxodonta_africana
ENSELUG00000013412	arfrp1	58	90.517	ENSMFAG00000001321	ARFRP1	96	90.517	Macaca_fascicularis
ENSELUG00000013412	arfrp1	100	84.577	ENSMMUG00000000169	ARFRP1	96	90.517	Macaca_mulatta
ENSELUG00000013412	arfrp1	100	84.577	ENSMNEG00000036325	ARFRP1	96	90.517	Macaca_nemestrina
ENSELUG00000013412	arfrp1	100	84.577	ENSMLEG00000034228	ARFRP1	96	90.517	Mandrillus_leucophaeus
ENSELUG00000013412	arfrp1	100	94.030	ENSMAMG00000019501	arfrp1	100	94.030	Mastacembelus_armatus
ENSELUG00000013412	arfrp1	100	93.532	ENSMZEG00005022808	arfrp1	100	93.532	Maylandia_zebra
ENSELUG00000013412	arfrp1	100	88.557	ENSMGAG00000006829	ARFRP1	100	88.557	Meleagris_gallopavo
ENSELUG00000013412	arfrp1	100	86.070	ENSMAUG00000006741	Arfrp1	100	86.070	Mesocricetus_auratus
ENSELUG00000013412	arfrp1	100	84.577	ENSMICG00000008840	ARFRP1	95	90.517	Microcebus_murinus
ENSELUG00000013412	arfrp1	100	86.070	ENSMOCG00000003005	Arfrp1	100	86.070	Microtus_ochrogaster
ENSELUG00000013412	arfrp1	100	93.035	ENSMMOG00000009657	arfrp1	100	93.035	Mola_mola
ENSELUG00000013412	arfrp1	100	88.557	ENSMODG00000017011	ARFRP1	100	88.557	Monodelphis_domestica
ENSELUG00000013412	arfrp1	100	86.070	MGP_CAROLIEiJ_G0024805	Arfrp1	96	92.241	Mus_caroli
ENSELUG00000013412	arfrp1	100	86.070	ENSMUSG00000038671	Arfrp1	96	92.241	Mus_musculus
ENSELUG00000013412	arfrp1	100	86.070	MGP_PahariEiJ_G0026253	Arfrp1	96	92.241	Mus_pahari
ENSELUG00000013412	arfrp1	100	86.070	MGP_SPRETEiJ_G0025731	Arfrp1	96	92.241	Mus_spretus
ENSELUG00000013412	arfrp1	100	83.085	ENSMPUG00000008452	ARFRP1	100	83.085	Mustela_putorius_furo
ENSELUG00000013412	arfrp1	100	86.070	ENSMLUG00000005259	ARFRP1	100	86.070	Myotis_lucifugus
ENSELUG00000013412	arfrp1	100	85.572	ENSNGAG00000014373	Arfrp1	100	85.572	Nannospalax_galili
ENSELUG00000013412	arfrp1	100	84.577	ENSNLEG00000010131	ARFRP1	96	90.517	Nomascus_leucogenys
ENSELUG00000013412	arfrp1	100	88.060	ENSMEUG00000011934	ARFRP1	100	88.060	Notamacropus_eugenii
ENSELUG00000013412	arfrp1	100	85.075	ENSOPRG00000003002	-	100	85.075	Ochotona_princeps
ENSELUG00000013412	arfrp1	100	86.070	ENSODEG00000006629	ARFRP1	100	86.070	Octodon_degus
ENSELUG00000013412	arfrp1	100	94.030	ENSONIG00000005124	arfrp1	100	94.030	Oreochromis_niloticus
ENSELUG00000013412	arfrp1	100	89.055	ENSOANG00000004933	ARFRP1	63	89.055	Ornithorhynchus_anatinus
ENSELUG00000013412	arfrp1	100	92.537	ENSORLG00000010647	arfrp1	100	92.537	Oryzias_latipes
ENSELUG00000013412	arfrp1	100	92.537	ENSORLG00020004500	arfrp1	100	92.537	Oryzias_latipes_hni
ENSELUG00000013412	arfrp1	100	92.040	ENSORLG00015022049	arfrp1	100	92.040	Oryzias_latipes_hsok
ENSELUG00000013412	arfrp1	100	94.030	ENSOMEG00000001352	arfrp1	100	94.030	Oryzias_melastigma
ENSELUG00000013412	arfrp1	100	85.075	ENSOGAG00000026673	ARFRP1	100	85.075	Otolemur_garnettii
ENSELUG00000013412	arfrp1	100	85.572	ENSOARG00000010188	ARFRP1	100	85.572	Ovis_aries
ENSELUG00000013412	arfrp1	100	84.577	ENSPPAG00000023993	ARFRP1	96	90.517	Pan_paniscus
ENSELUG00000013412	arfrp1	100	85.572	ENSPPRG00000024309	ARFRP1	95	91.379	Panthera_pardus
ENSELUG00000013412	arfrp1	100	85.075	ENSPTIG00000021097	ARFRP1	95	91.379	Panthera_tigris_altaica
ENSELUG00000013412	arfrp1	100	84.577	ENSPTRG00000013747	ARFRP1	96	91.379	Pan_troglodytes
ENSELUG00000013412	arfrp1	100	84.577	ENSPTRG00000044739	-	100	84.577	Pan_troglodytes
ENSELUG00000013412	arfrp1	100	84.577	ENSPANG00000025599	ARFRP1	96	90.517	Papio_anubis
ENSELUG00000013412	arfrp1	100	95.025	ENSPKIG00000006104	arfrp1	97	95.025	Paramormyrops_kingsleyae
ENSELUG00000013412	arfrp1	100	85.572	ENSPSIG00000014774	ARFRP1	100	85.572	Pelodiscus_sinensis
ENSELUG00000013412	arfrp1	100	95.025	ENSPMGG00000019041	arfrp1	100	95.025	Periophthalmus_magnuspinnatus
ENSELUG00000013412	arfrp1	100	88.060	ENSPCIG00000017923	ARFRP1	100	88.060	Phascolarctos_cinereus
ENSELUG00000013412	arfrp1	100	92.040	ENSPFOG00000003764	arfrp1	100	92.040	Poecilia_formosa
ENSELUG00000013412	arfrp1	100	92.040	ENSPLAG00000022207	arfrp1	100	92.040	Poecilia_latipinna
ENSELUG00000013412	arfrp1	100	92.040	ENSPMEG00000013451	arfrp1	100	92.040	Poecilia_mexicana
ENSELUG00000013412	arfrp1	100	92.040	ENSPREG00000019667	arfrp1	100	92.040	Poecilia_reticulata
ENSELUG00000013412	arfrp1	100	84.577	ENSPPYG00000011245	ARFRP1	100	84.577	Pongo_abelii
ENSELUG00000013412	arfrp1	98	85.787	ENSPCAG00000001846	ARFRP1	100	85.787	Procavia_capensis
ENSELUG00000013412	arfrp1	100	84.577	ENSPCOG00000024163	ARFRP1	96	90.517	Propithecus_coquereli
ENSELUG00000013412	arfrp1	100	84.080	ENSPVAG00000013488	ARFRP1	100	84.080	Pteropus_vampyrus
ENSELUG00000013412	arfrp1	100	95.025	ENSPNAG00000003438	arfrp1	100	95.025	Pygocentrus_nattereri
ENSELUG00000013412	arfrp1	100	86.070	ENSRNOG00000013992	Arfrp1	100	86.070	Rattus_norvegicus
ENSELUG00000013412	arfrp1	100	84.577	ENSRBIG00000044065	ARFRP1	96	90.517	Rhinopithecus_bieti
ENSELUG00000013412	arfrp1	100	84.577	ENSRROG00000010121	ARFRP1	96	90.517	Rhinopithecus_roxellana
ENSELUG00000013412	arfrp1	97	50.254	YPL051W	-	98	50.254	Saccharomyces_cerevisiae
ENSELUG00000013412	arfrp1	100	83.582	ENSSBOG00000021962	ARFRP1	97	88.889	Saimiri_boliviensis_boliviensis
ENSELUG00000013412	arfrp1	100	88.557	ENSSHAG00000017842	ARFRP1	100	88.557	Sarcophilus_harrisii
ENSELUG00000013412	arfrp1	100	94.527	ENSSFOG00015020500	arfrp1	100	94.527	Scleropages_formosus
ENSELUG00000013412	arfrp1	100	93.532	ENSSMAG00000001351	arfrp1	89	93.532	Scophthalmus_maximus
ENSELUG00000013412	arfrp1	100	94.527	ENSSDUG00000007121	arfrp1	100	94.527	Seriola_dumerili
ENSELUG00000013412	arfrp1	100	94.527	ENSSLDG00000020044	arfrp1	100	94.527	Seriola_lalandi_dorsalis
ENSELUG00000013412	arfrp1	99	88.500	ENSSPUG00000018502	ARFRP1	99	88.500	Sphenodon_punctatus
ENSELUG00000013412	arfrp1	100	84.577	ENSSSCG00000035304	ARFRP1	100	84.577	Sus_scrofa
ENSELUG00000013412	arfrp1	100	88.060	ENSTGUG00000007096	ARFRP1	100	88.060	Taeniopygia_guttata
ENSELUG00000013412	arfrp1	100	93.035	ENSTRUG00000009319	arfrp1	100	93.035	Takifugu_rubripes
ENSELUG00000013412	arfrp1	69	95.652	ENSTNIG00000005278	arfrp1	100	95.652	Tetraodon_nigroviridis
ENSELUG00000013412	arfrp1	100	83.582	ENSTTRG00000012222	ARFRP1	100	83.582	Tursiops_truncatus
ENSELUG00000013412	arfrp1	86	92.486	ENSXCOG00000009364	arfrp1	88	92.486	Xiphophorus_couchianus
ENSELUG00000013412	arfrp1	100	92.040	ENSXMAG00000002627	arfrp1	100	92.040	Xiphophorus_maculatus