EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000013471 (Gene tree)
Gene ID: 105021233
Gene Symbol: zbtb18
Alias: si:ch211-221n23.1|znf238
Full Name: zinc finger and BTB domain containing 18
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 6717 bases
Position: chrLG05:21680583-21687299
Accession: 105021233
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000034794	zf-C2H2	PF00096.26	1.9e-13	1	3
ENSELUP00000034794	zf-C2H2	PF00096.26	1.9e-13	2	3
ENSELUP00000034794	zf-C2H2	PF00096.26	1.9e-13	3	3
ENSELUP00000034794	zf-met	PF12874.7	5.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000021866	-	4675	XM_010888752	ENSELUP00000034794	552 (aa)	XP_010887054	UPI000575F0A1

Gene Model

Click here to download ENSELUG00000013471's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000013471's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000013471	zbtb18	100	74.315	ENSAPOG00000005168	zbtb18	100	75.000	Acanthochromis_polyacanthus
ENSELUG00000013471	zbtb18	99	72.272	ENSACIG00000008655	zbtb18	99	72.630	Amphilophus_citrinellus
ENSELUG00000013471	zbtb18	100	74.315	ENSAOCG00000014105	zbtb18	100	75.000	Amphiprion_ocellaris
ENSELUG00000013471	zbtb18	100	73.720	ENSAPEG00000003817	zbtb18	79	74.744	Amphiprion_percula
ENSELUG00000013471	zbtb18	100	74.828	ENSATEG00000010192	zbtb18	100	75.172	Anabas_testudineus
ENSELUG00000013471	zbtb18	99	74.653	ENSACLG00000022978	zbtb18	98	75.347	Astatotilapia_calliptera
ENSELUG00000013471	zbtb18	100	81.283	ENSAMXG00000042119	zbtb18	100	81.283	Astyanax_mexicanus
ENSELUG00000013471	zbtb18	100	74.828	ENSCSEG00000003083	zbtb18	100	75.690	Cynoglossus_semilaevis
ENSELUG00000013471	zbtb18	99	75.215	ENSCVAG00000016785	zbtb18	99	75.215	Cyprinodon_variegatus
ENSELUG00000013471	zbtb18	98	82.577	ENSDARG00000028228	zbtb18	100	82.577	Danio_rerio
ENSELUG00000013471	zbtb18	99	75.086	ENSFHEG00000020005	zbtb18	99	75.086	Fundulus_heteroclitus
ENSELUG00000013471	zbtb18	59	92.366	ENSGMOG00000018718	zbtb18	59	90.206	Gadus_morhua
ENSELUG00000013471	zbtb18	99	75.433	ENSGAFG00000000619	zbtb18	99	75.433	Gambusia_affinis
ENSELUG00000013471	zbtb18	99	75.795	ENSGACG00000010518	zbtb18	96	76.190	Gasterosteus_aculeatus
ENSELUG00000013471	zbtb18	100	74.699	ENSHBUG00000013654	zbtb18	100	75.387	Haplochromis_burtoni
ENSELUG00000013471	zbtb18	64	77.387	ENSHCOG00000002345	zbtb18	94	77.387	Hippocampus_comes
ENSELUG00000013471	zbtb18	100	71.964	ENSIPUG00000008912	zbtb18	100	71.964	Ictalurus_punctatus
ENSELUG00000013471	zbtb18	99	75.174	ENSKMAG00000002780	zbtb18	99	75.390	Kryptolebias_marmoratus
ENSELUG00000013471	zbtb18	100	75.215	ENSLBEG00000014796	zbtb18	100	75.215	Labrus_bergylta
ENSELUG00000013471	zbtb18	85	65.833	ENSMFAG00000033326	ZBTB18	100	64.730	Macaca_fascicularis
ENSELUG00000013471	zbtb18	84	66.737	ENSMMUG00000015664	ZBTB18	100	65.328	Macaca_mulatta
ENSELUG00000013471	zbtb18	100	74.828	ENSMAMG00000021720	zbtb18	100	75.517	Mastacembelus_armatus
ENSELUG00000013471	zbtb18	100	74.699	ENSMZEG00005027394	zbtb18	100	75.387	Maylandia_zebra
ENSELUG00000013471	zbtb18	94	51.789	ENSMGAG00000015389	-	100	51.326	Meleagris_gallopavo
ENSELUG00000013471	zbtb18	98	74.640	ENSMMOG00000007888	zbtb18	99	74.640	Mola_mola
ENSELUG00000013471	zbtb18	100	74.697	ENSMALG00000000725	zbtb18	100	74.523	Monopterus_albus
ENSELUG00000013471	zbtb18	98	75.088	ENSNBRG00000013796	zbtb18	100	75.789	Neolamprologus_brichardi
ENSELUG00000013471	zbtb18	100	74.699	ENSONIG00000000862	zbtb18	100	75.387	Oreochromis_niloticus
ENSELUG00000013471	zbtb18	99	74.870	ENSORLG00000027425	zbtb18	98	74.870	Oryzias_latipes
ENSELUG00000013471	zbtb18	99	74.870	ENSORLG00020011988	zbtb18	98	74.870	Oryzias_latipes_hni
ENSELUG00000013471	zbtb18	99	75.000	ENSORLG00015017457	zbtb18	98	74.697	Oryzias_latipes_hsok
ENSELUG00000013471	zbtb18	99	73.565	ENSOMEG00000011249	zbtb18	98	75.652	Oryzias_melastigma
ENSELUG00000013471	zbtb18	99	81.607	ENSPKIG00000021964	zbtb18	96	81.607	Paramormyrops_kingsleyae
ENSELUG00000013471	zbtb18	98	59.049	ENSPKIG00000008787	-	100	58.318	Paramormyrops_kingsleyae
ENSELUG00000013471	zbtb18	98	73.237	ENSPMGG00000008020	zbtb18	100	73.237	Periophthalmus_magnuspinnatus
ENSELUG00000013471	zbtb18	98	74.431	ENSPFOG00000022080	zbtb18	100	74.431	Poecilia_formosa
ENSELUG00000013471	zbtb18	98	73.656	ENSPLAG00000020960	zbtb18	100	73.656	Poecilia_latipinna
ENSELUG00000013471	zbtb18	98	73.656	ENSPLAG00000011299	-	100	73.656	Poecilia_latipinna
ENSELUG00000013471	zbtb18	98	75.306	ENSPMEG00000007554	zbtb18	100	75.306	Poecilia_mexicana
ENSELUG00000013471	zbtb18	99	75.302	ENSPREG00000008576	zbtb18	99	75.302	Poecilia_reticulata
ENSELUG00000013471	zbtb18	100	74.699	ENSPNYG00000001530	zbtb18	100	75.387	Pundamilia_nyererei
ENSELUG00000013471	zbtb18	89	76.908	ENSPNAG00000014066	zbtb18	89	76.908	Pygocentrus_nattereri
ENSELUG00000013471	zbtb18	98	75.929	ENSSMAG00000018041	zbtb18	100	76.418	Scophthalmus_maximus
ENSELUG00000013471	zbtb18	98	75.263	ENSSDUG00000018660	zbtb18	100	75.614	Seriola_dumerili
ENSELUG00000013471	zbtb18	98	75.088	ENSSLDG00000022573	zbtb18	100	75.439	Seriola_lalandi_dorsalis
ENSELUG00000013471	zbtb18	94	51.589	ENSSPUG00000010554	-	100	52.523	Sphenodon_punctatus
ENSELUG00000013471	zbtb18	100	75.043	ENSSPAG00000002691	zbtb18	100	75.387	Stegastes_partitus
ENSELUG00000013471	zbtb18	98	76.450	ENSTRUG00000020604	zbtb18	100	76.801	Takifugu_rubripes
ENSELUG00000013471	zbtb18	99	75.398	ENSTNIG00000000430	zbtb18	99	75.575	Tetraodon_nigroviridis
ENSELUG00000013471	zbtb18	98	73.393	ENSXCOG00000013308	zbtb18	100	73.393	Xiphophorus_couchianus
ENSELUG00000013471	zbtb18	99	72.143	ENSXMAG00000018241	zbtb18	99	72.143	Xiphophorus_maculatus