EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000013552 (Gene tree)
Gene ID: 105018971
Gene Symbol: -
Alias: -
Full Name: threonine--tRNA ligase%2C cytoplasmic
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 18592 bases
Position: chrLG20:25870541-25889132
Accession: 105018971
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000013412	HGTP_anticodon	PF03129.20	1.2e-15	1	1
ENSELUP00000013412	tRNA-synt_2b	PF00587.25	5.1e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000021965	-	3406	XM_010884809	ENSELUP00000013412	693 (aa)	XP_010883111	UPI000577D655

Gene Model

Click here to download ENSELUG00000013552's gene model file

Pathways

Pathway ID	Pathway Name	Source
els00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000013552's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000013552	-	94	52.115	ENSELUG00000007414	tarsl2	99	50.304
ENSELUG00000013552	-	85	64.939	ENSELUG00000011403	tars	98	64.939

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000013552	-	94	51.729	ENSG00000185418	TARSL2	99	44.521	Homo_sapiens
ENSELUG00000013552	-	61	76.596	ENSAPOG00000015706	-	99	76.596	Acanthochromis_polyacanthus
ENSELUG00000013552	-	95	51.704	ENSAMEG00000003074	TARSL2	86	51.704	Ailuropoda_melanoleuca
ENSELUG00000013552	-	64	83.258	ENSACIG00000007759	-	95	83.753	Amphilophus_citrinellus
ENSELUG00000013552	-	62	81.075	ENSAOCG00000012359	-	99	81.075	Amphiprion_ocellaris
ENSELUG00000013552	-	61	78.251	ENSAPEG00000007512	-	99	78.251	Amphiprion_percula
ENSELUG00000013552	-	100	76.801	ENSATEG00000023568	-	100	76.801	Anabas_testudineus
ENSELUG00000013552	-	94	52.194	ENSAPLG00000008485	TARSL2	92	52.194	Anas_platyrhynchos
ENSELUG00000013552	-	96	50.888	ENSACAG00000003076	-	99	50.888	Anolis_carolinensis
ENSELUG00000013552	-	95	40.835	ENSACAG00000000199	TARSL2	90	40.376	Anolis_carolinensis
ENSELUG00000013552	-	97	47.877	ENSANAG00000020687	TARSL2	87	48.513	Aotus_nancymaae
ENSELUG00000013552	-	100	76.801	ENSACLG00000020262	-	100	76.801	Astatotilapia_calliptera
ENSELUG00000013552	-	97	72.578	ENSAMXG00000012533	-	97	72.578	Astyanax_mexicanus
ENSELUG00000013552	-	95	50.522	ENSBTAG00000007651	TARSL2	84	50.522	Bos_taurus
ENSELUG00000013552	-	97	58.559	ENSCJAG00000017350	TARSL2	81	58.559	Callithrix_jacchus
ENSELUG00000013552	-	95	51.039	ENSCAFG00000010453	TARSL2	85	50.877	Canis_familiaris
ENSELUG00000013552	-	95	50.893	ENSCAFG00020020868	TARSL2	98	53.607	Canis_lupus_dingo
ENSELUG00000013552	-	84	51.438	ENSCHIG00000015264	TARSL2	82	51.438	Capra_hircus
ENSELUG00000013552	-	96	50.074	ENSTSYG00000004538	TARSL2	97	50.000	Carlito_syrichta
ENSELUG00000013552	-	90	46.178	ENSCAPG00000004815	TARSL2	94	46.178	Cavia_aperea
ENSELUG00000013552	-	95	51.190	ENSCPOG00000008850	TARSL2	96	51.190	Cavia_porcellus
ENSELUG00000013552	-	97	51.098	ENSCCAG00000030068	TARSL2	85	50.727	Cebus_capucinus
ENSELUG00000013552	-	97	50.364	ENSCATG00000037383	TARSL2	86	51.042	Cercocebus_atys
ENSELUG00000013552	-	96	51.039	ENSCLAG00000016873	TARSL2	88	51.039	Chinchilla_lanigera
ENSELUG00000013552	-	97	50.509	ENSCSAG00000016828	TARSL2	86	50.509	Chlorocebus_sabaeus
ENSELUG00000013552	-	90	50.158	ENSCHOG00000001319	TARSL2	97	50.158	Choloepus_hoffmanni
ENSELUG00000013552	-	94	52.030	ENSCPBG00000010792	TARSL2	84	52.030	Chrysemys_picta_bellii
ENSELUG00000013552	-	97	50.655	ENSCANG00000035438	TARSL2	96	50.655	Colobus_angolensis_palliatus
ENSELUG00000013552	-	97	50.145	ENSCGRG00001020827	Tarsl2	87	50.145	Cricetulus_griseus_chok1gshd
ENSELUG00000013552	-	97	50.145	ENSCGRG00000011398	Tarsl2	96	50.145	Cricetulus_griseus_crigri
ENSELUG00000013552	-	99	72.294	ENSCSEG00000002562	-	100	78.923	Cynoglossus_semilaevis
ENSELUG00000013552	-	62	82.831	ENSCVAG00000009253	-	100	82.831	Cyprinodon_variegatus
ENSELUG00000013552	-	61	79.621	ENSDARG00000075385	LO017852.1	99	79.621	Danio_rerio
ENSELUG00000013552	-	96	50.517	ENSDNOG00000046161	TARSL2	97	50.517	Dasypus_novemcinctus
ENSELUG00000013552	-	97	51.391	ENSDORG00000009653	Tarsl2	99	50.865	Dipodomys_ordii
ENSELUG00000013552	-	96	51.331	ENSEASG00005017718	TARSL2	86	51.245	Equus_asinus_asinus
ENSELUG00000013552	-	96	51.327	ENSECAG00000024315	TARSL2	85	51.327	Equus_caballus
ENSELUG00000013552	-	86	53.833	ENSEEUG00000014117	TARSL2	99	53.707	Erinaceus_europaeus
ENSELUG00000013552	-	96	51.627	ENSFCAG00000008836	TARSL2	83	52.839	Felis_catus
ENSELUG00000013552	-	94	52.417	ENSFALG00000012444	TARSL2	89	52.417	Ficedula_albicollis
ENSELUG00000013552	-	95	48.503	ENSFDAG00000002767	TARSL2	95	48.503	Fukomys_damarensis
ENSELUG00000013552	-	64	83.296	ENSFHEG00000021877	-	81	83.296	Fundulus_heteroclitus
ENSELUG00000013552	-	96	77.027	ENSGMOG00000006184	-	99	75.942	Gadus_morhua
ENSELUG00000013552	-	95	53.754	ENSGALG00000043416	-	91	65.228	Gallus_gallus
ENSELUG00000013552	-	94	51.885	ENSGALG00000003985	TARSL2	84	51.885	Gallus_gallus
ENSELUG00000013552	-	98	74.926	ENSGAFG00000012691	-	98	74.926	Gambusia_affinis
ENSELUG00000013552	-	100	76.225	ENSGACG00000011734	-	100	76.225	Gasterosteus_aculeatus
ENSELUG00000013552	-	94	51.584	ENSGAGG00000010775	TARSL2	84	51.584	Gopherus_agassizii
ENSELUG00000013552	-	94	51.579	ENSGGOG00000007839	TARSL2	86	51.579	Gorilla_gorilla
ENSELUG00000013552	-	100	76.945	ENSHBUG00000003411	-	100	76.945	Haplochromis_burtoni
ENSELUG00000013552	-	94	50.452	ENSHGLG00000011618	TARSL2	85	50.452	Heterocephalus_glaber_female
ENSELUG00000013552	-	94	50.452	ENSHGLG00100016769	TARSL2	95	50.452	Heterocephalus_glaber_male
ENSELUG00000013552	-	98	72.741	ENSHCOG00000014119	-	98	72.741	Hippocampus_comes
ENSELUG00000013552	-	61	74.057	ENSIPUG00000000099	-	100	74.057	Ictalurus_punctatus
ENSELUG00000013552	-	97	51.176	ENSSTOG00000032725	TARSL2	87	51.092	Ictidomys_tridecemlineatus
ENSELUG00000013552	-	100	76.945	ENSKMAG00000001354	-	100	76.945	Kryptolebias_marmoratus
ENSELUG00000013552	-	61	79.765	ENSLBEG00000026238	-	100	79.765	Labrus_bergylta
ENSELUG00000013552	-	94	51.274	ENSLAFG00000011941	TARSL2	98	51.274	Loxodonta_africana
ENSELUG00000013552	-	97	50.218	ENSMFAG00000001902	TARSL2	86	50.218	Macaca_fascicularis
ENSELUG00000013552	-	97	50.364	ENSMMUG00000000278	TARSL2	86	50.364	Macaca_mulatta
ENSELUG00000013552	-	97	50.218	ENSMNEG00000034952	TARSL2	86	50.218	Macaca_nemestrina
ENSELUG00000013552	-	97	50.509	ENSMLEG00000035535	TARSL2	98	50.509	Mandrillus_leucophaeus
ENSELUG00000013552	-	100	77.089	ENSMAMG00000015032	-	100	77.089	Mastacembelus_armatus
ENSELUG00000013552	-	100	76.801	ENSMZEG00005015989	-	100	76.801	Maylandia_zebra
ENSELUG00000013552	-	85	60.694	ENSMGAG00000004951	TARSL2	95	60.694	Meleagris_gallopavo
ENSELUG00000013552	-	88	59.948	ENSMAUG00000015756	Tarsl2	85	59.948	Mesocricetus_auratus
ENSELUG00000013552	-	97	50.367	ENSMICG00000013039	TARSL2	99	50.367	Microcebus_murinus
ENSELUG00000013552	-	97	50.729	ENSMOCG00000014909	Tarsl2	87	50.729	Microtus_ochrogaster
ENSELUG00000013552	-	63	79.043	ENSMMOG00000016135	-	100	79.043	Mola_mola
ENSELUG00000013552	-	94	51.433	ENSMODG00000011941	TARSL2	83	51.433	Monodelphis_domestica
ENSELUG00000013552	-	99	74.286	ENSMALG00000007340	-	99	74.286	Monopterus_albus
ENSELUG00000013552	-	97	50.218	MGP_CAROLIEiJ_G0029834	Tarsl2	87	50.218	Mus_caroli
ENSELUG00000013552	-	97	50.073	ENSMUSG00000030515	Tarsl2	87	50.073	Mus_musculus
ENSELUG00000013552	-	97	50.000	MGP_PahariEiJ_G0013059	Tarsl2	86	50.000	Mus_pahari
ENSELUG00000013552	-	95	52.077	ENSMPUG00000011032	TARSL2	92	50.349	Mustela_putorius_furo
ENSELUG00000013552	-	82	51.884	ENSMLUG00000024482	-	97	51.884	Myotis_lucifugus
ENSELUG00000013552	-	97	51.308	ENSMLUG00000012870	-	86	51.308	Myotis_lucifugus
ENSELUG00000013552	-	97	50.808	ENSNGAG00000020451	Tarsl2	86	50.511	Nannospalax_galili
ENSELUG00000013552	-	96	78.163	ENSNBRG00000003429	-	97	78.163	Neolamprologus_brichardi
ENSELUG00000013552	-	95	51.267	ENSNLEG00000000541	TARSL2	85	51.267	Nomascus_leucogenys
ENSELUG00000013552	-	81	47.957	ENSMEUG00000002935	TARSL2	70	47.957	Notamacropus_eugenii
ENSELUG00000013552	-	71	44.088	ENSOPRG00000002689	-	62	44.088	Ochotona_princeps
ENSELUG00000013552	-	96	51.709	ENSODEG00000014454	TARSL2	85	51.709	Octodon_degus
ENSELUG00000013552	-	96	77.895	ENSONIG00000006402	-	99	77.895	Oreochromis_niloticus
ENSELUG00000013552	-	94	51.286	ENSOANG00000013263	TARSL2	98	51.286	Ornithorhynchus_anatinus
ENSELUG00000013552	-	97	50.735	ENSOCUG00000010740	TARSL2	95	50.735	Oryctolagus_cuniculus
ENSELUG00000013552	-	100	72.222	ENSORLG00000010391	-	100	72.222	Oryzias_latipes
ENSELUG00000013552	-	100	72.622	ENSORLG00020008928	-	100	72.622	Oryzias_latipes_hni
ENSELUG00000013552	-	100	72.478	ENSORLG00015014897	-	100	72.478	Oryzias_latipes_hsok
ENSELUG00000013552	-	100	73.237	ENSOMEG00000009022	-	100	73.237	Oryzias_melastigma
ENSELUG00000013552	-	97	50.073	ENSOGAG00000014311	TARSL2	85	50.073	Otolemur_garnettii
ENSELUG00000013552	-	95	50.522	ENSOARG00000016573	TARSL2	95	50.522	Ovis_aries
ENSELUG00000013552	-	94	51.429	ENSPPAG00000040066	TARSL2	96	51.429	Pan_paniscus
ENSELUG00000013552	-	96	51.331	ENSPPRG00000017275	TARSL2	84	52.524	Panthera_pardus
ENSELUG00000013552	-	96	51.331	ENSPTIG00000015184	TARSL2	84	51.331	Panthera_tigris_altaica
ENSELUG00000013552	-	94	51.579	ENSPTRG00000007516	TARSL2	83	51.579	Pan_troglodytes
ENSELUG00000013552	-	97	48.567	ENSPANG00000022401	TARSL2	86	48.567	Papio_anubis
ENSELUG00000013552	-	97	69.481	ENSPKIG00000010658	-	98	78.571	Paramormyrops_kingsleyae
ENSELUG00000013552	-	82	53.927	ENSPSIG00000008419	TARSL2	99	53.927	Pelodiscus_sinensis
ENSELUG00000013552	-	62	81.075	ENSPMGG00000007785	-	98	81.075	Periophthalmus_magnuspinnatus
ENSELUG00000013552	-	97	50.508	ENSPEMG00000019852	Tarsl2	93	50.508	Peromyscus_maniculatus_bairdii
ENSELUG00000013552	-	94	51.584	ENSPCIG00000022481	TARSL2	82	51.584	Phascolarctos_cinereus
ENSELUG00000013552	-	95	75.338	ENSPFOG00000013444	-	100	75.338	Poecilia_formosa
ENSELUG00000013552	-	100	74.352	ENSPLAG00000018145	-	100	74.352	Poecilia_latipinna
ENSELUG00000013552	-	100	73.919	ENSPMEG00000023625	-	100	73.919	Poecilia_mexicana
ENSELUG00000013552	-	61	82.588	ENSPREG00000017312	-	100	82.588	Poecilia_reticulata
ENSELUG00000013552	-	85	59.839	ENSPPYG00000006830	TARSL2	82	59.839	Pongo_abelii
ENSELUG00000013552	-	86	49.420	ENSPCAG00000011132	TARSL2	75	49.420	Procavia_capensis
ENSELUG00000013552	-	97	37.971	ENSPCOG00000026095	TARSL2	84	38.261	Propithecus_coquereli
ENSELUG00000013552	-	87	51.676	ENSPVAG00000012240	TARSL2	84	39.086	Pteropus_vampyrus
ENSELUG00000013552	-	100	76.801	ENSPNYG00000004232	-	100	76.801	Pundamilia_nyererei
ENSELUG00000013552	-	97	73.134	ENSPNAG00000002308	-	97	73.134	Pygocentrus_nattereri
ENSELUG00000013552	-	62	44.570	ENSRNOG00000024460	Tarsl2	79	44.570	Rattus_norvegicus
ENSELUG00000013552	-	95	51.339	ENSRBIG00000035707	TARSL2	86	51.339	Rhinopithecus_bieti
ENSELUG00000013552	-	97	50.509	ENSRROG00000029492	TARSL2	86	51.190	Rhinopithecus_roxellana
ENSELUG00000013552	-	97	50.952	ENSSBOG00000029807	TARSL2	99	50.581	Saimiri_boliviensis_boliviensis
ENSELUG00000013552	-	94	51.958	ENSSHAG00000010266	TARSL2	88	51.958	Sarcophilus_harrisii
ENSELUG00000013552	-	97	70.000	ENSSFOG00015022086	tars2	97	70.000	Scleropages_formosus
ENSELUG00000013552	-	99	74.530	ENSSMAG00000015682	-	97	76.541	Scophthalmus_maximus
ENSELUG00000013552	-	62	83.721	ENSSDUG00000007180	-	99	83.721	Seriola_dumerili
ENSELUG00000013552	-	61	84.543	ENSSLDG00000015367	-	100	84.543	Seriola_lalandi_dorsalis
ENSELUG00000013552	-	58	65.926	ENSSPUG00000001523	TARSL2	98	64.066	Sphenodon_punctatus
ENSELUG00000013552	-	100	72.046	ENSSPAG00000018887	-	100	72.046	Stegastes_partitus
ENSELUG00000013552	-	91	50.853	ENSSSCG00000005781	TARSL2	99	50.226	Sus_scrofa
ENSELUG00000013552	-	95	51.946	ENSTGUG00000005726	TARSL2	99	51.946	Taeniopygia_guttata
ENSELUG00000013552	-	61	59.670	ENSTGUG00000004602	-	98	59.670	Taeniopygia_guttata
ENSELUG00000013552	-	61	83.372	ENSTRUG00000015004	-	100	83.372	Takifugu_rubripes
ENSELUG00000013552	-	99	70.496	ENSTNIG00000008060	-	99	70.213	Tetraodon_nigroviridis
ENSELUG00000013552	-	71	58.192	ENSTBEG00000001134	-	74	57.895	Tupaia_belangeri
ENSELUG00000013552	-	96	50.296	ENSTTRG00000016207	TARSL2	96	50.296	Tursiops_truncatus
ENSELUG00000013552	-	95	51.647	ENSUMAG00000024371	TARSL2	98	55.696	Ursus_maritimus
ENSELUG00000013552	-	95	50.893	ENSVVUG00000014742	TARSL2	99	50.731	Vulpes_vulpes
ENSELUG00000013552	-	67	78.879	ENSXCOG00000019508	-	94	83.791	Xiphophorus_couchianus
ENSELUG00000013552	-	98	74.926	ENSXMAG00000016382	-	98	74.926	Xiphophorus_maculatus